For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MLLPVLEPADRPCDAPGWFLYLTDIPRAGVEYGQLLAVLPLQRMLPAGDGHPVLVLPGLLAGDGSTWILR RILRRLGYAAYGWGLGRNIGPTAKAVSGMRDLLDKLHSRYHTPVSLIGWSLGGIFARGLARDHPSAVRQV ITLGSPFGMRDTCETRSAWSFNRYAHLHTERHELPLEMESEPLPVPTTAIYSRCDGMVAWQTCMNSPSER AENIAVRSSHIGYGHNPPVVWAIADRLAQPQGAWAPFRPPKVLSPLFPRPDTPAEAVSTPQTRPA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1192 | - | - | 100% (275) | hypothetical protein Rv1192 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1224 | - | 1e-166 | 100.00% (275) | hypothetical protein Mb1224 |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4244 | - | 1e-105 | 70.66% (259) | hypothetical protein MMAR_4244 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0942 | - | 1e-105 | 70.66% (259) | hypothetical protein MUL_0942 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4244|M.marinum_M MSVAAEAVEFPTAAPHVVSAGAPKMGLYLSDIPRAVAEYGQLVSLFPLQK MUL_0942|M.ulcerans_Agy99 -------MEFPTAAPHVVSAGAPKMGLYLSDIPRAVAEYGQLVSLFPLQK Rv1192|M.tuberculosis_H37Rv -------MLLPVLEPADRPCDAPGWFLYLTDIPRAGVEYGQLLAVLPLQR Mb1224|M.bovis_AF2122/97 -------MLLPVLEPADRPCDAPGWFLYLTDIPRAGVEYGQLLAVLPLQR : :*. * ...** ***:***** .*****::::***: MMAR_4244|M.marinum_M ALPVGDGHPVLVLPGLLAGDGSTWTLRWLLGRLGYRAYGWRLGLNIGPTS MUL_0942|M.ulcerans_Agy99 ALPVGDGHPVLVLPGLLAGDGSTWTLRWLLGRLGYRAYGWRLGLNIGPTS Rv1192|M.tuberculosis_H37Rv MLPAGDGHPVLVLPGLLAGDGSTWILRRILRRLGYAAYGWGLGRNIGPTA Mb1224|M.bovis_AF2122/97 MLPAGDGHPVLVLPGLLAGDGSTWILRRILRRLGYAAYGWGLGRNIGPTA **.******************** ** :* **** **** ** *****: MMAR_4244|M.marinum_M KVVDGMSARLEALHTRYNTPVSLVGWSLGGIFARTLARRHPEAVRQVITL MUL_0942|M.ulcerans_Agy99 KVVDGMSARLEALHTRYNTPVSLVGWSLGGIFARTLARRHPEAVRQVITL Rv1192|M.tuberculosis_H37Rv KAVSGMRDLLDKLHSRYHTPVSLIGWSLGGIFARGLARDHPSAVRQVITL Mb1224|M.bovis_AF2122/97 KAVSGMRDLLDKLHSRYHTPVSLIGWSLGGIFARGLARDHPSAVRQVITL *.*.** *: **:**:*****:********** *** **.******** MMAR_4244|M.marinum_M GSPFRMQDESQSRAARHFRIFQRLHAERHELPLPAEAEPLPVPSTAIYSR MUL_0942|M.ulcerans_Agy99 GSPFRMQDESQSRAARHFRIFQRLHAERHELPLPAEAEPLPVPSTAIYSR Rv1192|M.tuberculosis_H37Rv GSPFGMRDTCETRSAWSFNRYAHLHTERHELPLEMESEPLPVPTTAIYSR Mb1224|M.bovis_AF2122/97 GSPFGMRDTCETRSAWSFNRYAHLHTERHELPLEMESEPLPVPTTAIYSR **** *:* .::*:* *. : :**:******* *:******:****** MMAR_4244|M.marinum_M YDGMVAWQTCLDTPSERAENIAVLSSHIGYGHHPATVWAIADRLAQPVDT MUL_0942|M.ulcerans_Agy99 YDGMVAWQTCLDTPSERAENIAVLSSHIGYGHHPATVWAIADRLAQPVDT Rv1192|M.tuberculosis_H37Rv CDGMVAWQTCMNSPSERAENIAVRSSHIGYGHNPPVVWAIADRLAQPQGA Mb1224|M.bovis_AF2122/97 CDGMVAWQTCMNSPSERAENIAVRSSHIGYGHNPPVVWAIADRLAQPQGA *********:::********** ********:*..*********** .: MMAR_4244|M.marinum_M WAPFRPPTVLRPLFPRPHTLHAAS-------- MUL_0942|M.ulcerans_Agy99 WAPFRPPTVLRPLFPRPHTLHAAS-------- Rv1192|M.tuberculosis_H37Rv WAPFRPPKVLSPLFPRPDTPAEAVSTPQTRPA Mb1224|M.bovis_AF2122/97 WAPFRPPKVLSPLFPRPDTPAEAVSTPQTRPA *******.** ******.* *