For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MIHDLMLRWVVTGLFVLTAAECGLAIIAKRRPWTLIVNHGLHFAMAVAMAVMAWPWGARVPTTGPAVFFL LAAVWFGATAVVAVRGTATRGLYGYHGLMMLATAWMYAAMNPRLLPVRSCTEYATEPDGSMPAMDMTAMN MPPNSGSPIWFSAVNWIGTVGFAVAAVFWACRFVMERRQEATQSRLPGSIGQAMMAAGMAMLFFAMLFPV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0970 | - | - | 100% (210) | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0995 | - | 1e-123 | 100.00% (210) | integral membrane protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | MLBr_01997 | - | 2e-52 | 51.42% (212) | putative integral membrane protein |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1432 | - | 6e-76 | 64.76% (210) | hypothetical protein MMAR_1432 |
M. avium 104 | MAV_0088 | - | 4e-34 | 38.10% (210) | hypothetical protein MAV_0088 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_4848 | - | 7e-44 | 40.40% (250) | hypothetical protein MUL_4848 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Rv0970|M.tuberculosis_H37Rv MIHDLMLRWVVTGLFVLT-------------------------------- Mb0995|M.bovis_AF2122/97 MIHDLMLRWVVTGLFVLT-------------------------------- MMAR_1432|M.marinum_M MIHDLMLRWVVTGLFALS-------------------------------- MLBr_01997|M.leprae_Br4923 MIDDLLLRWVVTGLFVLS-------------------------------- MUL_4848|M.ulcerans_Agy99 MINDLLIRWLATGLFVFSGVDYALSALSALSALPALPALPALPALSTFSA MAV_0088|M.avium_104 MIGELTVRWAVTALFGAS-------------------------------- ** :* :** .*.** : Rv0970|M.tuberculosis_H37Rv ----AAECGLAIIAKRRPWTLIVNHGLHFAMAVAMAVMAWPWGARVPTTG Mb0995|M.bovis_AF2122/97 ----AAECGLAIIAKRRPWTLIVNHGLHFAMAVAMAVMAWPWGARVPTTG MMAR_1432|M.marinum_M ----AAECVAAIATTRRPWTLVVHHGLHLVMAVAMAVMAWPRGAQLQPTG MLBr_01997|M.leprae_Br4923 ----AAECGFACLACRRPWTLVPSNGLHFAMAIAMAVMAWPRGAQLPTTG MUL_4848|M.ulcerans_Agy99 LPASSAFSGAPTVTQQRAWTSVVSNGLHLVMAIAMVVMLWPVGAALPTTG MAV_0088|M.avium_104 ----LAAYAYLAVSQRGRWSCAVNHLLHLAMSAAMILMVWRVGLGLPAVA * : : *: : **:.*: ** :* * * : ... Rv0970|M.tuberculosis_H37Rv PAVFFLLAAVWFGATAVVAVRGTATRGLYGYHGLMMLATAWMYAAMNPRL Mb0995|M.bovis_AF2122/97 PAVFFLLAAVWFGATAVVAVRGTATRGLYGYHGLMMLATAWMYAAMNPRL MMAR_1432|M.marinum_M PAVFFLLAAVWFVAMAIVASATTAGRGVYVYHALMMLASSWMYAIMSDHL MLBr_01997|M.leprae_Br4923 TVVFCGLVGAWFVILATVSSRRIAERAAYAYPALMMLAMVWMYVIMDSHL MUL_4848|M.ulcerans_Agy99 PAVFFLLAAVWFATLTALRAKTTTALVGCSYHALMMLAMAWMYVAMSDQL MAV_0088|M.avium_104 PTLFFLLAGAWFVFLAVRASAESRERLKTCYYAAMMAAMAWMYALMSSGT ..:* *...** : * . ** * ***. *. Rv0970|M.tuberculosis_H37Rv LPVRSCTEYATE-PDGSMPAMDMTAMNMPPNSGSPIWFSAVNWIGTVGFA Mb0995|M.bovis_AF2122/97 LPVRSCTEYATE-PDGSMPAMDMTAMNMPPNSGSPIWFSAVNWIGTVGFA MMAR_1432|M.marinum_M LPLLSSTQHAPA-TTTSIPTMDEAAMNMPATSASPIWFSTVNWFGAVGLA MLBr_01997|M.leprae_Br4923 HDHWATGHHTS--PHTSMLGVDMTTTVVP-ASGIPGWISIINWLWFAFFC MUL_4848|M.ulcerans_Agy99 LACP-AAHQTMA-PGTSMPGMHMSGTDMAAGATAPGWVSAVNWFWLLAFA MAV_0088|M.avium_104 TGAHAHGHSASDSVGANMPGMRLPEHPASPGAGGFSWVAAANWLGALGFA . : .: : . . : *.: **: :. Rv0970|M.tuberculosis_H37Rv VAAVFWACRFVMERRQEATQSR--LPGSIGQAMMAAGMAMLFFAMLFPV Mb0995|M.bovis_AF2122/97 VAAVFWACRFVMERRQEATQSR--LPGSIGQAMMAAGMAMLFFAMLFPV MMAR_1432|M.marinum_M AAAVFWACLYLIGQPHEGTRSR--SLGNLGQATMAAGMAILFFATLLRI MLBr_01997|M.leprae_Br4923 IATVFWTYRSFATSRRNAGFSRYCSLHPSGQAMMSTGMAIMFGVLLFHV MUL_4848|M.ulcerans_Agy99 IAAIIRAAMSVRARPRAGTESWRSCLTHAGRAMMAAGMAIAFAAMVFGI MAV_0088|M.avium_104 ALAVYWLYRFVGQRRLARVPARLARMEPLYQAFTAAGTALMFDTLLR-- :: . : :* ::* *: * . :