For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VFTIGYSCASRGADSWLIRRCSVVQGCLDDPGATVEAIDDDGWPHTGDPCSPNSAASGKYGERPASVSTG DIHSLVIASDYRVPDPGRVWPLLQRNKSALADIGAHHVLIYASTHDSGRVLVMIGVRSREPIVELLRSRV FFDWFDAMGVDDIPAVFAGEIVDRFVAAPTTTQSTPRVPGVVVAAFASVNNVSNLTAEVRSAIARFTAAG IRKTWVFQAFDDAHEVLILQEFADEAGARQWIEHPDAAAEWMSGAGVGAYPPLFVGRFFDMMRIEALQ
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0852 | fadD16 | - | 100% (278) | POSSIBLE FATTY-ACID-CoA LIGASE FADD16 (FATTY-ACID-CoA SYNTHETASE) (FATTY-ACID-CoA SYNTHASE) |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0875 | fadD16 | 1e-163 | 100.00% (278) | fatty-acid-CoA ligase |
M. gilvum PYR-GCK | Mflv_3323 | - | 7e-54 | 49.51% (204) | FadD16 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0596c | - | 7e-08 | 50.98% (51) | fatty-acid-CoA ligase FadD |
M. marinum M | MMAR_4685 | fadD16 | 5e-90 | 76.33% (207) | fatty-acid-CoA ligase FadD16 |
M. avium 104 | MAV_0972 | - | 1e-96 | 80.95% (210) | putative acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_3566 | - | 1e-56 | 49.76% (209) | FadD16 protein |
M. thermoresistible (build 8) | TH_0413 | - | 3e-59 | 50.47% (212) | FadD16 protein |
M. ulcerans Agy99 | MUL_4126 | fadD3 | 2e-05 | 62.50% (32) | acyl-CoA synthetase |
M. vanbaalenii PYR-1 | Mvan_3044 | - | 7e-55 | 49.02% (204) | FadD16 |
CLUSTAL 2.0.9 multiple sequence alignment Rv0852|M.tuberculosis_H37Rv -------------------------------------------------- Mb0875|M.bovis_AF2122/97 -------------------------------------------------- MAV_0972|M.avium_104 -------------------------------------------------- MMAR_4685|M.marinum_M -------------------------------------------------- Mflv_3323|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_3044|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_3566|M.smegmatis_MC2_155 -------------------------------------------------- TH_0413|M.thermoresistible__bu -------------------------------------------------- MAB_0596c|M.abscessus_ATCC_199 MESAQQTPGLTIPAALDQAAARFGERDALYADGSWLSFSELRARARRFAA MUL_4126|M.ulcerans_Agy99 MTSDPR----TVPTALDRLVRRLPNHDALVTDERSFTVSELNDEVYRAAA Rv0852|M.tuberculosis_H37Rv -------------------------------------------------- Mb0875|M.bovis_AF2122/97 -------------------------------------------------- MAV_0972|M.avium_104 -------------------------------------------------- MMAR_4685|M.marinum_M -------------------------------------------------- Mflv_3323|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_3044|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_3566|M.smegmatis_MC2_155 -------------------------------------------------- TH_0413|M.thermoresistible__bu -------------------------------------------------- MAB_0596c|M.abscessus_ATCC_199 ALIALGVEHGQRLAIWSPNSWHWPIACLGGQYAGAAVVPMNTRYTVDEAT MUL_4126|M.ulcerans_Agy99 ALIELGVKPAARVGIWSPNTWHWVVACLAIHHVGAAMVPLNTRYTADEAA Rv0852|M.tuberculosis_H37Rv -----MFTIGYSCASRGADSWLIRRCSVVQGCLDDPGATVEAIDDDGWPH Mb0875|M.bovis_AF2122/97 -----MFTIGYSCASRGADSWLIRRCSVVQGCLDDPGATVEAIDDDGWPH MAV_0972|M.avium_104 -------------------------------------------------- MMAR_4685|M.marinum_M -------------------------------------------------- Mflv_3323|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_3044|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_3566|M.smegmatis_MC2_155 -------------------------------------------------- TH_0413|M.thermoresistible__bu -------------------------------------------------- MAB_0596c|M.abscessus_ATCC_199 DILQRSHARVLVSVGKFLGTDRIEQLDTSSLPDLRHIVRVAVEDGDESGW MUL_4126|M.ulcerans_Agy99 DILARTEAPVLFAMGHFLGSDRVAGLDRKALPALRHIVRIPIEEPDGT-W Rv0852|M.tuberculosis_H37Rv TGDPCSPNSAASGKYGERPASVSTGDIHSLVIAS---------------- Mb0875|M.bovis_AF2122/97 TGDPCSPNSAASGKYGERPASVSTGDIHSLVIAS---------------- MAV_0972|M.avium_104 ---------------------MNNGDIHSMVIAS---------------- MMAR_4685|M.marinum_M ----------------------MTNDLHSMVIAS---------------- Mflv_3323|M.gilvum_PYR-GCK ---------------------MGEYDLHSFILAC---------------- Mvan_3044|M.vanbaalenii_PYR-1 ---------------------MGEYELHSFILAC---------------- MSMEG_3566|M.smegmatis_MC2_155 ---------------------MSEYDLHSLILAC---------------- TH_0413|M.thermoresistible__bu ---------------------MSEYDLDSLIVAC---------------- MAB_0596c|M.abscessus_ATCC_199 DAFVAHGDGVSDGDIDTRKAAVSSEDISDILFTSGTTGRSKGVLCMHRQP MUL_4126|M.ulcerans_Agy99 DEFIET--GTDTGAVTARAAAVSPDDVSDILFTSGTTGRSKGVLCAHRQS :: .::.:. Rv0852|M.tuberculosis_H37Rv -----------DYRVPD----PGRVWPLLQRNKSALADIGAHHVLIYAST Mb0875|M.bovis_AF2122/97 -----------DYRVPD----PGRVWPLLQRNKSALADIGAHHVLIYAST MAV_0972|M.avium_104 -----------DYRVPD----PTRVWPLLERNKAALADIGAHHVLVYTST MMAR_4685|M.marinum_M -----------DYRVSD----PTRVWPLLERNKSALADIGAHHVLVYAST Mflv_3323|M.gilvum_PYR-GCK -----------DFKVDD----VDVMWKWLGKHRDGLHSIGAHHVVLYESI Mvan_3044|M.vanbaalenii_PYR-1 -----------DFRVDD----VDRMWEWLKKHREGLESIGAHHVVLYESI MSMEG_3566|M.smegmatis_MC2_155 -----------DFRVDD----VDDMWKWMNKHRDGLKSIGAHHVVLYKSI TH_0413|M.thermoresistible__bu -----------DFRVED----VDGMWRWMQRQRDGLAEFGAHHVVVYSSL MAB_0596c|M.abscessus_ATCC_199 LAASLAWATYGEFTENDRYLCVNPFFHNFGYKAGILACLQTGAALMPQLT MUL_4126|M.ulcerans_Agy99 LSASASWAANGKITADDRHLCINPFFHNFGYKAGILACLQTGATLFPHLT . * .: : : * : : .:. Rv0852|M.tuberculosis_H37Rv HDSGRVLVMIG------VRSREPIVELLRSRVFFDWFDAM-------GVD Mb0875|M.bovis_AF2122/97 HDSGRVLVMIG------VRSREPIVELLRSRVFFDWFDAM-------GVD MAV_0972|M.avium_104 HDYGRVLVMIG------VHSREPIVELLRSRVFFDWFDEA-------GVD MMAR_4685|M.marinum_M HDYGRVLVMIG------VHSREPVVELLRSRIFFDWFDAV-------GVD Mflv_3323|M.gilvum_PYR-GCK WEPRRVLVTIG------IRQARSIREVLSSPAIFEWFDIS-------GAD Mvan_3044|M.vanbaalenii_PYR-1 WEPRRVFVTIG------IRNARSIRDVLRSPAIFEWFDIS-------GAD MSMEG_3566|M.smegmatis_MC2_155 WEPGRVLVTIG------IRQARSIRELLRSPEIFEWFDKS-------GVQ TH_0413|M.thermoresistible__bu WEPGRILVTIG------IREPHSIRELLGSSRVFEWFDIA-------GVQ MAB_0596c|M.abscessus_ATCC_199 FDPEKAMAAVQEHKITVLPGAPTIFQMLLDHPARKNYDLTSLRYSVTGAA MUL_4126|M.ulcerans_Agy99 FDPLRTLQAIERHRITVLPGPPTIYQTLLDHPARDDYDLSSLRFAVTGAA : : : : : .: : * . . :* *. Rv0852|M.tuberculosis_H37Rv DIPAVFAGEIVDRFVAAPTTTQSTPRVPGVVVAAFASVNNVSNLTAEVR- Mb0875|M.bovis_AF2122/97 DIPAVFAGEIVDRFVAAPTTTQSTPRVPGVVVAAFASVNNVSNLTAEVR- MAV_0972|M.avium_104 DIPAVFAGEIVDRFITRPPTN---PRAPGVVVAAIASVNDVALLTSEVS- MMAR_4685|M.marinum_M DIPAVFAGEIVDRFVVGASGS-GAAAAPGVVVAAIASVDDVATLIAEVA- Mflv_3323|M.gilvum_PYR-GCK DIPPVFGGEVVEKIDLIGSGE--DNVVGRVVVGVMSSVQDVSTLMDKVH- Mvan_3044|M.vanbaalenii_PYR-1 DIPPIFGGEVVEKIDLFGSGP--EGHVGRVVVGVMSSVADVSELMVKVH- MSMEG_3566|M.smegmatis_MC2_155 DIPPIFGGEVVEKIDLGEPTP--ETHVAGVIVGAVAPVDDVSTLMRKVH- TH_0413|M.thermoresistible__bu DIPPIFGGQVVERLDLFEPAP--ADAIANVIVGAMAAVDDVSNLMIKVR- MAB_0596c|M.abscessus_ATCC_199 VVPVVLIERMQSELDFDLVLTAYGLTETQGFATICRSDDDAVTVATTCGR MUL_4126|M.ulcerans_Agy99 TVPVVLVERMQSELDIDIVLTAYGLTEANGMGTMCRADDDALTVATTCGR :* :: .: ..: . . :. : Rv0852|M.tuberculosis_H37Rv -------------------------------------SAIARFTAAGIRK Mb0875|M.bovis_AF2122/97 -------------------------------------SAIARFTAAGIRK MAV_0972|M.avium_104 -------------------------------------SAIDRFAQAGIRK MMAR_4685|M.marinum_M -------------------------------------PAMERFVAAGIRK Mflv_3323|M.gilvum_PYR-GCK -------------------------------------DGLDRFRQGGVRK Mvan_3044|M.vanbaalenii_PYR-1 -------------------------------------DGLPRFKNGGVRK MSMEG_3566|M.smegmatis_MC2_155 -------------------------------------DGLARFAGSGIRK TH_0413|M.thermoresistible__bu -------------------------------------DALDRFTSAGVRR MAB_0596c|M.abscessus_ATCC_199 PMLGYELRIDGAEKPGDEGEVLLRSANVMKGYLDDPKATAEAIDDDGWLH MUL_4126|M.ulcerans_Agy99 PFADFELRIG-----PDTGEVLLRGPNVMLGYLDDPRATAAAIDADGWLH : * : Rv0852|M.tuberculosis_H37Rv TWVFQAFDDAHEVLILQEFADEAGARQWIEHPDAAAEWMSGAG------V Mb0875|M.bovis_AF2122/97 TWVFQAFDDAHEVLILQEFADEAGARQWIEHPDAAAEWMSGAG------V MAV_0972|M.avium_104 TWVFQAFDDDHEVLILQEFPDEDSAREWIDHPDAAAQWMSGAG------I MMAR_4685|M.marinum_M TWVFQAFDDSHEVLILQEFPDEQRAREWIDHPDAAAQWLRGAG------I Mflv_3323|M.gilvum_PYR-GCK IWVYRALDDGHEVLILQEIADEASARQWIEHPDAAAEWMTNAG------M Mvan_3044|M.vanbaalenii_PYR-1 IWVYRAFDDGQEVLILQEIADEASARQWIEHPDAAAEWMTNAG------M MSMEG_3566|M.smegmatis_MC2_155 IWVYRALDDGNEVMILQEIENEVSARQWISHPDAAAEWMTNAG------F TH_0413|M.thermoresistible__bu IWVYRALDDGHEVMILQEIESEAAARQWIDHPDAAAEWMTKAG------L MAB_0596c|M.abscessus_ATCC_199 TGDIGKLDARGNLTITDRLKDMYICGGFNVYPAEIEQVLMRLDGVADVAV MUL_4126|M.ulcerans_Agy99 TGDIGVLDEAGNLRITDRLKDMYICGGFNVYPAEVEQVLARLDGVADVAV :* :: * :.: . . : :* : : . . Rv0852|M.tuberculosis_H37Rv GAYPPLFVGRFFDMMRIEALQ----------------------------- Mb0875|M.bovis_AF2122/97 GAYPPLFVGRFFDMMRIEALQ----------------------------- MAV_0972|M.avium_104 GAYPPLFVGRFFDMMRIRAD------------------------------ MMAR_4685|M.marinum_M GAYPPLFVGRLSEMMRIDPQ------------------------------ Mflv_3323|M.gilvum_PYR-GCK GAYPTRFVGRLAHLMSVGEQV----------------------------- Mvan_3044|M.vanbaalenii_PYR-1 GPYPSRFVGRFAHLMSVGEPG----------------------------- MSMEG_3566|M.smegmatis_MC2_155 GPYPSLFVGKLAHIMTIEGQV----------------------------- TH_0413|M.thermoresistible__bu GAYPSLFVGKFVHLMSVDESGNRMR------------------------- MAB_0596c|M.abscessus_ATCC_199 IGVPDARLGEVGKAYIVLKPGATLNADSVIEYSAKHVANFKKPRFVDFLD MUL_4126|M.ulcerans_Agy99 IGIPDHRLGEVGRAFIVARPGFNLDEKSVIDYTREHLANFKAPRSVRFVD * :*.. : Rv0852|M.tuberculosis_H37Rv ------------------------------ Mb0875|M.bovis_AF2122/97 ------------------------------ MAV_0972|M.avium_104 ------------------------------ MMAR_4685|M.marinum_M ------------------------------ Mflv_3323|M.gilvum_PYR-GCK ------------------------------ Mvan_3044|M.vanbaalenii_PYR-1 ------------------------------ MSMEG_3566|M.smegmatis_MC2_155 ------------------------------ TH_0413|M.thermoresistible__bu ------------------------------ MAB_0596c|M.abscessus_ATCC_199 ELPRNLGGKVVKPTLRAMHGEQRRAQKESS MUL_4126|M.ulcerans_Agy99 TLPRNAGGKVVKPQLRELA-----------