For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPERQSSEELATALAASSGGISTN ARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMR DLLAYMENVVSDALGRYSQRTGEDD
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0678 | - | - | 100% (165) | hypothetical protein Rv0678 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0697 | - | 5e-90 | 100.00% (165) | hypothetical protein Mb0697 |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1857c | - | 6e-15 | 33.10% (142) | hypothetical protein MAB_1857c |
M. marinum M | MMAR_1007 | - | 7e-74 | 83.03% (165) | transcriptional regulator |
M. avium 104 | MAV_2992 | - | 2e-20 | 36.36% (143) | transcriptional regulator, MarR family protein |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0759 | - | 7e-75 | 83.64% (165) | transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_0777 | - | 8e-14 | 31.97% (147) | transcriptional regulator, TrmB |
CLUSTAL 2.0.9 multiple sequence alignment Rv0678|M.tuberculosis_H37Rv MSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPER Mb0697|M.bovis_AF2122/97 MSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPER MMAR_1007|M.marinum_M MSVNEGVDRAGTEADIMEFVEQMGGYFESSGLTRLAGRLLGWLLVCDPER MUL_0759|M.ulcerans_Agy99 MSVNEGVDRAGTEADIMEFVEQMGGYFESSGLTRLAGRLLGWLLVCDPER MAV_2992|M.avium_104 -----------MSPDEAEFVDRLGLFFELLGATRTMGRVYGWLLICEPPQ MAB_1857c|M.abscessus_ATCC_199 ---------------MDESAEQLALMLTTHGMQRMTARVLTALLFTEQPT Mvan_0777|M.vanbaalenii_PYR-1 ---------MAPSPKVHDAAERLALVLAGHGLQRMTARVLAALLFSEQPS : .:::. : . * .*: **. : Rv0678|M.tuberculosis_H37Rv QSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAF Mb0697|M.bovis_AF2122/97 QSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAF MMAR_1007|M.marinum_M QSSEELATALAASSGGISTTARMLIQFGFIERLAVAGDRRTFYRLRPNAF MUL_0759|M.ulcerans_Agy99 QSSEELATALAASSGGISTTARMLIQFGFIERLAVAGDRRTFYRLRPNAF MAV_2992|M.avium_104 QSLTQLADALSVSKASISTVARQLLDGGMVERLPSP-NRQHLYRVTPGGF MAB_1857c|M.abscessus_ATCC_199 MTSSELSEQLQASSGAISTSIRMLTSVGLAERVPVPASRRDHYRLRDNAW Mvan_0777|M.vanbaalenii_PYR-1 VTMAELADDLQASAGSISGALKTLTAVGLAERVPAPSSRRDHFRLRPDAW : :*: * .* ..** : * *: **:. . .*: :*: ..: Rv0678|M.tuberculosis_H37Rv AAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVV Mb0697|M.bovis_AF2122/97 AAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVV MMAR_1007|M.marinum_M AAGERERLRTMADLQNLADTGLKALGGAPPERSRRLHEMRDLLAYMEKVL MUL_0759|M.ulcerans_Agy99 AAGERERLRTMADLQNLADTGLKALGDAPPERSRRLHEMRDLLAYMEKVL MAV_2992|M.avium_104 TSVLETQLSLMRLGIEPAEFALSVLGDDRAEQRRRVEDFRDFCEFCTRDY MAB_1857c|M.abscessus_ATCC_199 AVLFTNQNAVLSAMQEAAAAGIAGTQKDSLARAR-LTQMRDFYAFLLGEI Mvan_0777|M.vanbaalenii_PYR-1 AMLYTGQNQTIAAFMDAADAGIAVTGRTSLARQR-LVEMRDFYAFLMAEI : : : : * .: : * : ::**: : Rv0678|M.tuberculosis_H37Rv SDALG------RYSQRTGEDD---------------- Mb0697|M.bovis_AF2122/97 SDALG------RYSQRTGEDD---------------- MMAR_1007|M.marinum_M AGALG------RYGQCGEEGDA--------------- MUL_0759|M.ulcerans_Agy99 AGALG------RYGQCGEEGDA--------------- MAV_2992|M.avium_104 RDQLMRMWTEYRSAKTAGPTKAAKEAGSTKSARRRQS MAB_1857c|M.abscessus_ATCC_199 PTLLE------RWRQEQH------------------- Mvan_0777|M.vanbaalenii_PYR-1 PAVLE------RWHARRDT------------------ * *