For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSRPGTYVIGLTLLVGLVVGNPGCPRSYRPLTLDYRLNPVAVIGDSYTTGTDEGGLGSKSWTARTWQMLA ARGVRIAADVAAEGRAGYGVPGDHGNVFEDLTARAVQPDDALVVFFGSRNDQGMDPEDPEMLAEKVRDTF DLARHRAPSASLLVIAPPWPTADVPGPMLRIRDVLGAQARAAGAVFVDPIADHWFVDRPELIGADGVHPN DAGHEYLADKIAPLISMELVG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0518 | - | - | 100% (231) | POSSIBLE EXPORTED PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0531 | - | 1e-135 | 100.00% (231) | hypothetical protein Mb0531 |
M. gilvum PYR-GCK | Mflv_3266 | - | 6e-63 | 54.59% (229) | GDSL family lipase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0402 | - | 2e-77 | 61.57% (229) | hypothetical protein MAB_0402 |
M. marinum M | MMAR_0855 | - | 1e-85 | 68.35% (237) | hypothetical protein MMAR_0855 |
M. avium 104 | MAV_4632 | - | 3e-89 | 69.13% (230) | hypothetical protein MAV_4632 |
M. smegmatis MC2 155 | MSMEG_3489 | - | 5e-66 | 55.90% (229) | hypothetical protein MSMEG_3489 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0607 | - | 7e-86 | 67.93% (237) | hypothetical protein MUL_0607 |
M. vanbaalenii PYR-1 | Mvan_2985 | - | 3e-65 | 62.44% (197) | GDSL family lipase |
CLUSTAL 2.0.9 multiple sequence alignment Rv0518|M.tuberculosis_H37Rv ----------------MSRPGTYVIGLTLLVGL-VVG------NPGCPRS Mb0531|M.bovis_AF2122/97 ----------------MSRPGTYVIGLTLLVGL-VVG------NPGCPRS MMAR_0855|M.marinum_M -------MIRSVVEVVVSRLVMVVIGLTLLVGV-VVGFPLRPLHPARARA MUL_0607|M.ulcerans_Agy99 MICVRHTMIRSVVEVVVSRLVMVVIGLTLLVGV-VVGFSLRPLHPARARA MAV_4632|M.avium_104 ----------------MSRLATFLIGVSLLLGVGLVA------YPAQLRT MAB_0402|M.abscessus_ATCC_1997 ------------MEVAVVRLAAFIIAFAFLFGVAAER-------PAPVRP MSMEG_3489|M.smegmatis_MC2_155 ----------------MSRLTTFLVAVALLVGVFVN---------VPTQR Mflv_3266|M.gilvum_PYR-GCK ----------------MSRVLTLVLCVAVLFSAGYAH-------APGSQQ Mvan_2985|M.vanbaalenii_PYR-1 ----------------MSRLLTVALSLVVLFASGFAQ-------VPEHQH : * : . .*.. : Rv0518|M.tuberculosis_H37Rv YRPLTLDYRLNPVAVIGDSYTTGTDEGGLGSKSWTARTWQMLAARGVRIA Mb0531|M.bovis_AF2122/97 YRPLTLDYRLNPVAVIGDSYTTGTDEGGLGSKSWTARTWQMLAARGVRIA MMAR_0855|M.marinum_M YDALTVDYRLSHIAVIGDSYTTGTDEGGRGPNAWTSLAWRELAQRGMRIN MUL_0607|M.ulcerans_Agy99 YDALTVDYRLSHIAVIGDSYTTGTDEGGRGPNAWTSLAWRELAQRGMRIN MAV_4632|M.avium_104 YETLTLDFRLNHVAVIGDSYTTGTNEGGLGARSWPSRAWQVLSARGSRVS MAB_0402|M.abscessus_ATCC_1997 YRLAYSGSGLNHVAVVSDSYTTGTKEGGLGAKSWTSIAWRILNREGVRVS MSMEG_3489|M.smegmatis_MC2_155 YVTSGLDPKIFHIAVIGDSYTTGAAEGGQGAKGWPTLAWQTLARRGVQIN Mflv_3266|M.gilvum_PYR-GCK HEVRYTDFARNRVAIIGDSYTTGSDQGGNGSQGWTPQVWEALTDHGIAVT Mvan_2985|M.vanbaalenii_PYR-1 REVRHLDFAANRIAVVGDSYTTGSDQGGNGPKGWMPQVWESLTDDGIAVT . :*::.******: :** *...* . .*. * * : Rv0518|M.tuberculosis_H37Rv ADVAAEGRAGYGVPGDHGNVFEDLTARAVQPDDALVVFFGSRNDQGMDPE Mb0531|M.bovis_AF2122/97 ADVAAEGRAGYGVPGDHGNVFEDLTARAVQPDDALVVFFGSRNDQGMDPE MMAR_0855|M.marinum_M ADVAAEGRAGYGMPGDHGSVFEDLTAGAVKPDDALVVFFGSRNDQGVDLG MUL_0607|M.ulcerans_Agy99 ADVAAEGRAGYGMPGDHGSVFEDLTAGAVKPDDALVVFFGSRNDQGVDLG MAV_4632|M.avium_104 ADVAAEGRAGYAVTGDHGSIFEDLTARAVQSDDALVVFFGSRNDQGVDPG MAB_0402|M.abscessus_ATCC_1997 ADVAAEGRAGYGVRGDHGSVFADLTGRVVHPDDELVVFFGSRNDQGVDPE MSMEG_3489|M.smegmatis_MC2_155 ADVVAEGGAGYVVRGNRGSIFADLTPRAVKPDDSLVVFYGSRNDKDADPV Mflv_3266|M.gilvum_PYR-GCK PTVAAEGGAGYCTRGNRGGVFEDLTVRAVKPDDVLVVFFGSRNDMQVDPT Mvan_2985|M.vanbaalenii_PYR-1 PTVAAEGGAGYCTRGNRGSVFEDLTVRAVKPSDLLVVFFGSRNDINVDPT . *.*** *** *::*.:* *** .*:..* ****:***** * Rv0518|M.tuberculosis_H37Rv DPEMLAEKVRDTFDLARHRAPSASLLVIAPPWPTADVPGPMLRIRDVLGA Mb0531|M.bovis_AF2122/97 DPEMLAEKVRDTFDLARHRAPSASLLVIAPPWPTADVPGPMLRIRDVLGA MMAR_0855|M.marinum_M ---LLGDRARNAFDLAHRVAPSARLLVIGPPWPTPDVPIPVLQIRDVVRA MUL_0607|M.ulcerans_Agy99 ---LLGDRARNAFDLAHRVAPSARLLVIGPPWPTPDVPIPVLQIRDVVRA MAV_4632|M.avium_104 ---LLIEKTHAALDLARRLAPAARLLVIGPPWPTADVPPSMYLIRDILGG MAB_0402|M.abscessus_ATCC_1997 ---TYAEVTRNTLESARRMAPAAKLLVIGPPWPTADVPEVVTQLRDILYT MSMEG_3489|M.smegmatis_MC2_155 ---AITRMSHDALALAQRIAPTARMLVIGPPWPTADVPVSVLRIRDILRD Mflv_3266|M.gilvum_PYR-GCK ---RLSVAMYGTLRLARQIARSAELLVIGPPWPTTTPPPEVLRIRDVLSY Mvan_2985|M.vanbaalenii_PYR-1 ---RLSIAMYGTFKLARQIAPSADLLVIGPPWPTADPPPEVLRIRDVLGY :: *:: * :* :***.*****. * : :**:: Rv0518|M.tuberculosis_H37Rv QARAAGAVFVDPIADHWFVDRPELIGADGVHPNDAGHEYLADKIAPLISM Mb0531|M.bovis_AF2122/97 QARAAGAVFVDPIADHWFVDRPELIGADGVHPNDAGHEYLADKIAPLISM MMAR_0855|M.marinum_M AAGFAQAEFVDPIAEGWFFDRPDLIGADGVHPNDAGHAYLADKIAPLIGA MUL_0607|M.ulcerans_Agy99 AAGFAQAEFVDPIAEGWFFDRPDLIGADGVHPNDAGHAYLADKIAPLIGA MAV_4632|M.avium_104 AAGAAGATFIDPIAEHWFVGRPDLIGADGVHPNDAGHQYMADKIAPLIRT MAB_0402|M.abscessus_ATCC_1997 EARAVGASWVDPLAERWFVGRPELIGSDGVHPNDAGHAYLADKIAPLIGT MSMEG_3489|M.smegmatis_MC2_155 QAEQVGASFYDPIAAGWFVGRPDLIGGDGIHPTDAGHAYMADKIATIIGD Mflv_3266|M.gilvum_PYR-GCK QADLAGATFVDPIAARWFAGRPELIGKDGVHPTDAGHAYMAAKIAPLISA Mvan_2985|M.vanbaalenii_PYR-1 QADLAGASFVDPIAARWFVGRPELIGADGVHPTDAGHTYMAQKIAPLIGA * . * : **:* ** .**:*** **:**.**** *:* ***.:* Rv0518|M.tuberculosis_H37Rv ELVG-- Mb0531|M.bovis_AF2122/97 ELVG-- MMAR_0855|M.marinum_M RLAG-- MUL_0607|M.ulcerans_Agy99 RLAG-- MAV_4632|M.avium_104 QLST-- MAB_0402|M.abscessus_ATCC_1997 RLTRRL MSMEG_3489|M.smegmatis_MC2_155 ELPRWV Mflv_3266|M.gilvum_PYR-GCK KLHPF- Mvan_2985|M.vanbaalenii_PYR-1 KLHPF- .*