For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGE PFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITL WPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPSRSYQNFIRST
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0321 | dcd | - | 100% (190) | deoxycytidine triphosphate deaminase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0329 | dcd | 1e-107 | 99.47% (190) | deoxycytidine triphosphate deaminase |
M. gilvum PYR-GCK | Mflv_0291 | dcd | 4e-96 | 85.71% (189) | deoxycytidine triphosphate deaminase |
M. leprae Br4923 | MLBr_02507 | dcd | 1e-100 | 90.00% (190) | deoxycytidine triphosphate deaminase |
M. abscessus ATCC 19977 | MAB_4297c | dcd | 2e-94 | 86.63% (187) | deoxycytidine triphosphate deaminase |
M. marinum M | MMAR_0600 | dcd | 1e-100 | 90.00% (190) | deoxycytidine triphosphate deaminase, Dcd |
M. avium 104 | MAV_4828 | dcd | 1e-102 | 92.63% (190) | deoxycytidine triphosphate deaminase |
M. smegmatis MC2 155 | MSMEG_0678 | dcd | 6e-94 | 86.24% (189) | deoxycytidine triphosphate deaminase |
M. thermoresistible (build 8) | TH_1210 | dcd | 1e-95 | 87.83% (189) | PROBABLE DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE DCD (DCTP |
M. ulcerans Agy99 | MUL_0560 | dcd | 1e-100 | 90.00% (190) | deoxycytidine triphosphate deaminase |
M. vanbaalenii PYR-1 | Mvan_0589 | dcd | 5e-97 | 87.30% (189) | deoxycytidine triphosphate deaminase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_0678|M.smegmatis_MC2_155 -------------------------MLLSDRDIRAEIAAKRLALEPFDDA TH_1210|M.thermoresistible__bu LNYTGTAQQVLLVMKASTPSRYAHRVLLSDRDIRAEIAAGRLALEPFDDS MAB_4297c|M.abscessus_ATCC_199 -------------------------MLLSDRDIRAELDAGRLGIEPLDAA Mflv_0291|M.gilvum_PYR-GCK -------------------------MLLSDRDIRAEFQAGRLGLDPFDDS Mvan_0589|M.vanbaalenii_PYR-1 -------------------------MLLSDRDIRAEITAGRLGVDPFDDS Rv0321|M.tuberculosis_H37Rv -------------------------MLLSDRDLRAEISSGRLGIDPFDDT Mb0329|M.bovis_AF2122/97 -------------------------MLLSDRDLRAEISSGRLGIDPFDDT MLBr_02507|M.leprae_Br4923 -------------------------MLLSDRDLRAEITAGRFSIDPFDDT MAV_4828|M.avium_104 -------------------------MLLSDRDLRAEITAGRLGIEPFDDA MMAR_0600|M.marinum_M -------------------------MLLSDRDLRAEISAGRLGIDPFDDS MUL_0560|M.ulcerans_Agy99 -------------------------MLLSDRDLRAEISAGRLGIDPFDDS :******:***: : *:.::*:* : MSMEG_0678|M.smegmatis_MC2_155 LVQPSSIDVRLDRMFRVFNNTRYTHIDPAMQQDELTTLVEPAEGEPFVLH TH_1210|M.thermoresistible__bu LVQPSSIDVRLDNLFRVFNNTRYTHIDPSIRQDELTSLVQAEDGEPFVLH MAB_4297c|M.abscessus_ATCC_199 LIQPSSIDVRLDSLFRVFNNTRYTHIDPKERQDELTSLVEPAEGEPFVLH Mflv_0291|M.gilvum_PYR-GCK LIQPSSVDVRLDNLFRVFNNTRYTHIDPAQRQDDLTSLVEPKEGEPFVLH Mvan_0589|M.vanbaalenii_PYR-1 LVQPSSVDVRLDNLFRVFNNTRYTHIDPAQRQDDLTSLVEPKEGEPFVLH Rv0321|M.tuberculosis_H37Rv LVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGEPFVLH Mb0329|M.bovis_AF2122/97 LVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGEPFVLH MLBr_02507|M.leprae_Br4923 LVQPSSIDVRLDCMFRVFNNTRYTHIDPARQQDELTSLVELVDGEPFVLH MAV_4828|M.avium_104 LVQPSSIDVRLDCMFRVFNNTRYTHIDPAKQQDELTSLVEPQDGEPFVLH MMAR_0600|M.marinum_M LVQPSSVDVRLDCMFRVFNNTRYTHIDPAQRQDELTSVVEPTKGDPFVLH MUL_0560|M.ulcerans_Agy99 LVQPSSVDVRLDCMFRVFNNTRYTHIDPAQRQDELTSAVEPTKGDPFVLH *:****:***** :************** :**:**: *: .*:***** MSMEG_0678|M.smegmatis_MC2_155 PGEFVLGSTLELCTLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGH TH_1210|M.thermoresistible__bu PGEFVLGSTLELCSLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGH MAB_4297c|M.abscessus_ATCC_199 PGEFVLGSTLEVCSLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGH Mflv_0291|M.gilvum_PYR-GCK PGEFVLGATLERCTLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGH Mvan_0589|M.vanbaalenii_PYR-1 PGEFVLGATLERCTLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGH Rv0321|M.tuberculosis_H37Rv PGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGH Mb0329|M.bovis_AF2122/97 PGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGH MLBr_02507|M.leprae_Br4923 PGGFVLGSTLELFTLPEDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFCGH MAV_4828|M.avium_104 PGEFVLGSTLELITLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGH MMAR_0600|M.marinum_M PGEFVLGSTLEIFSLPGDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGH MUL_0560|M.ulcerans_Agy99 PGEFVLGSTLEIFSLPGDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGH ** ****:*** :** :*****************************.** MSMEG_0678|M.smegmatis_MC2_155 ITLELSNVANLPITLWPGMKIGQLCLLRLTSPAENPYGSAAVGSKYQGQR TH_1210|M.thermoresistible__bu ITLELSNVANLPITLWPGMKIGQLCLLRLTSPAEFPYGSTQAGSKYQGQR MAB_4297c|M.abscessus_ATCC_199 ITLELSNVANLPITLWPGMKIGQLCLLRLTSPAEHPYGSAGVGSKYQGQR Mflv_0291|M.gilvum_PYR-GCK ITLELSNVANLPITLWPGMKIGQLCLLRLTSPAQHPYGSSQVGSKYQGQR Mvan_0589|M.vanbaalenii_PYR-1 ITLELSNVANLPITLWPGMKIGQLCLLRLTSPAEHPYGSSSVGSKYQGQR Rv0321|M.tuberculosis_H37Rv ITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQR Mb0329|M.bovis_AF2122/97 ITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQR MLBr_02507|M.leprae_Br4923 ITLELSNVANLPITLWPGMKIGQLCVLRLTSPAEHPYGSASAGSKYQGQR MAV_4828|M.avium_104 ITLELSNVANLPITLWPGMKIGQLCILRLTSPAEHPYGSTRVGSKYQGQR MMAR_0600|M.marinum_M ITLELSNVANLPITLWPGMKIGQLCILKLTSPSEHPYGSSGVGSKYQGQR MUL_0560|M.ulcerans_Agy99 ITLELSNVANLPITLWPGMKIGQLCILKLTSPSEHPYGSSGVGSKYQGQR *************************:*:****:: ****: .******** MSMEG_0678|M.smegmatis_MC2_155 GPTPSRSHLNFIKS----- TH_1210|M.thermoresistible__bu GPTPSRSYQNFVKSIRPQP MAB_4297c|M.abscessus_ATCC_199 GPTPSRSYQNFINP----- Mflv_0291|M.gilvum_PYR-GCK GPTPSKSYQNFVKSN---- Mvan_0589|M.vanbaalenii_PYR-1 GPTPSRSYQNFVKND---- Rv0321|M.tuberculosis_H37Rv GPTPSRSYQNFIRST---- Mb0329|M.bovis_AF2122/97 GPTPSRSCQNFIRST---- MLBr_02507|M.leprae_Br4923 GPTPSRSYENFIKNT---- MAV_4828|M.avium_104 GPTPSRSYQNFITST---- MMAR_0600|M.marinum_M GPTPSRSYQNFIRST---- MUL_0560|M.ulcerans_Agy99 GPTPSRSYQNFIRST---- *****:* **: