For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQ WAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYA GYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0038 | - | - | 100% (202) | hypothetical protein Rv0038 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0039 | - | 1e-115 | 100.00% (202) | hypothetical protein Mb0039 |
M. gilvum PYR-GCK | Mflv_0850 | - | 7e-97 | 85.28% (197) | hypothetical protein Mflv_0850 |
M. leprae Br4923 | MLBr_00028 | - | 1e-102 | 88.61% (202) | hypothetical protein MLBr_00028 |
M. abscessus ATCC 19977 | MAB_4928c | - | 3e-90 | 80.41% (194) | hypothetical protein MAB_4928c |
M. marinum M | MMAR_0053 | - | 1e-105 | 91.54% (201) | hypothetical protein MMAR_0053 |
M. avium 104 | MAV_0052 | - | 1e-105 | 90.55% (201) | hypothetical protein MAV_0052 |
M. smegmatis MC2 155 | MSMEG_6921 | - | 2e-96 | 83.08% (201) | hypothetical protein MSMEG_6921 |
M. thermoresistible (build 8) | TH_0511 | - | 1e-100 | 86.07% (201) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_0052 | - | 1e-105 | 91.54% (201) | hypothetical protein MUL_0052 |
M. vanbaalenii PYR-1 | Mvan_6057 | - | 1e-100 | 87.06% (201) | hypothetical protein Mvan_6057 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0850|M.gilvum_PYR-GCK --------------MASPDDPEDYQDR----AAPAAHRVRAGTMLLANTD Mvan_6057|M.vanbaalenii_PYR-1 --------------MAQPEDPEDF-------VAPAAYRVRAGTMLLANTD MSMEG_6921|M.smegmatis_MC2_155 --------------MAQSEDPEDF-------IAPAAHRVRPGTLLLANTD TH_0511|M.thermoresistible__bu LYSRRFGAGAIMKDVAHSEEPEDF-------IAPAAQRVRSGTLLLANTD Rv0038|M.tuberculosis_H37Rv -------------MVAPHEDPEDH-------VAPAAQRVRAGTLLLANTD Mb0039|M.bovis_AF2122/97 -------------MVAPHEDPEDH-------VAPAAQRVRAGTLLLANTD MMAR_0053|M.marinum_M --------------MAPQEDPEDH-------VAPAAQRVRAGTLLLANTD MUL_0052|M.ulcerans_Agy99 --------------MAPQEDPEDH-------VAPAAQRVRAGTLLLANTD MAV_0052|M.avium_104 --------------MPPPEDPEDY-------VAPAAQRVRAGTLLLANTD MLBr_00028|M.leprae_Br4923 --------------MIRPEDPEDY-------VAPAAQRVRAGTLLLANTD MAB_4928c|M.abscessus_ATCC_199 --------------MAHGDEPEEGEAYGEGYMAPPAHRLRAGTLLIANTN : ::**: **.* *:*.**:*:***: Mflv_0850|M.gilvum_PYR-GCK LLEPTFRRSVIYVVEHNDGGTLGVVLNRASETAVYNVLPQWAKLAVKPKT Mvan_6057|M.vanbaalenii_PYR-1 LLEPTFRRSVIYVVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLATKPKT MSMEG_6921|M.smegmatis_MC2_155 LLEPTFRRTVIYIVEHNSGGTLGVILNRPSETAVYNVLPQWAEVTAKPKT TH_0511|M.thermoresistible__bu LLEPTFRRSVIYIIEHNDGGTLGVVLNRPSETAVYNILPQWAKLAAKPKT Rv0038|M.tuberculosis_H37Rv LLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKT Mb0039|M.bovis_AF2122/97 LLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKT MMAR_0053|M.marinum_M LLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVHNVLPQWAKLAAKPKT MUL_0052|M.ulcerans_Agy99 LLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVHNVLPQWAKLAAKPKT MAV_0052|M.avium_104 LLEPTFRRSVIYIVEHNDGGTLGVVLNRPSDTAVYNVLPQWTTLAAKPKT MLBr_00028|M.leprae_Br4923 LLEPTFRRSVIYIVEHNEGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKT MAB_4928c|M.abscessus_ATCC_199 LFEPTFRRSVIFIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAGKPKT *:******:**:::***.******:***.*:***:*:****: :: **** Mflv_0850|M.gilvum_PYR-GCK MFIGGPVKRDAALCLGTLRVGSDPVGVPGLRHVQGRIVMVDLDADPDELA Mvan_6057|M.vanbaalenii_PYR-1 MFIGGPVKRDAALCLATLRVGIDPAGVDGLRHVQGRVVMVDLDADPDSIA MSMEG_6921|M.smegmatis_MC2_155 MFIGGPVKRDSALCLATLRVGMQADGVDGLRHVQGRVVMVDLDADPEELA TH_0511|M.thermoresistible__bu VFIGGPVKRDAALCLGKLRVGVDAAGVPGLRHVQGRIVMVDLDADPDAVA Rv0038|M.tuberculosis_H37Rv MFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLA Mb0039|M.bovis_AF2122/97 MFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLA MMAR_0053|M.marinum_M MFIGGPVKRDAALCLATLRVGADPGGVSGLRHVAGRIVMVDLDADPDLIA MUL_0052|M.ulcerans_Agy99 MFIGGPVKRDAALCLATLRVGADPGGVSGLRHVAGRIVMVDLDADPDLIA MAV_0052|M.avium_104 MFIGGPVKRDAALCLATLRVGADPQGAPGLRHVDGRVVMVDLDADPDAIA MLBr_00028|M.leprae_Br4923 MFIGGPVKRDAALCLAVLRIGADPDGVAGLRHVAGRLVMVDLDAEPDLIA MAB_4928c|M.abscessus_ATCC_199 MFVGGPVKRDAALCLATLRAGVSIDGVKGLRHVAGRMAMVDLDAEPEDIA :*:*******:****. ** * . *. ***** **:.******:*: :* Mflv_0850|M.gilvum_PYR-GCK PILEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPTDVLVEPKVDLWAR Mvan_6057|M.vanbaalenii_PYR-1 PMVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVEPRVDLWAR MSMEG_6921|M.smegmatis_MC2_155 PVIEGVRIFAGYSGWTTGQLDGEIERDDWIVLSALPSDVLIEPRIDLWGR TH_0511|M.thermoresistible__bu PALEGIRIFAGYSGWTIGQLDGEIERDDWIVLSALPSDVLVEPRVDLWGR Rv0038|M.tuberculosis_H37Rv AAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQ Mb0039|M.bovis_AF2122/97 AAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQ MMAR_0053|M.marinum_M PLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVPPRADLWGR MUL_0052|M.ulcerans_Agy99 PLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVPPRADLWGR MAV_0052|M.avium_104 PLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRSDLWGQ MLBr_00028|M.leprae_Br4923 PLVDGLRIFVGYSGWTIGQLKGEIERDDWIVLSALPSDVLVGKRADLWAQ MAB_4928c|M.abscessus_ATCC_199 PLVEGIRVFAGYSGWTIGQLEGEVERDDWIVLSALPSDVLTDASEDLWAK . ::*:*::.****** ***.**:************:*** ***.: Mflv_0850|M.gilvum_PYR-GCK ILRRQPMPLSLLATHPIDLSRN Mvan_6057|M.vanbaalenii_PYR-1 ILRRQPMPLSLLATHPIDLSRN MSMEG_6921|M.smegmatis_MC2_155 VLRRQPLPMSLLATHPIDVSRN TH_0511|M.thermoresistible__bu VLRRQPYPLSLLATHPIDLSRN Rv0038|M.tuberculosis_H37Rv VLRRQPLPLSLLATHPIDLSRN Mb0039|M.bovis_AF2122/97 VLRRQPLPLSLLATHPIDLSRN MMAR_0053|M.marinum_M TLRRQPWPLSLLATHPIDVSRN MUL_0052|M.ulcerans_Agy99 TLRRQPWPLSLLATHPIDVSRN MAV_0052|M.avium_104 VLRRQPLPLSLLATHPIDISRN MLBr_00028|M.leprae_Br4923 VLRRQPLLLSLLATHPIDVSRN MAB_4928c|M.abscessus_ATCC_199 VLRRQPLPLSLLATHPIDVSRN ***** :*********:***