For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PHDTSFAPTQLAARAAYLLRGNDLGVMTTAAPLLYPHMWSWDAAFVAIGLAPLSVERAVVELDTLLSAQW RNGMIPHIVFANGVDGYFPGPARWACSALSPDAPRTRHTSGITQPPVHAIAVQRILDHARTRGRSTRAVA QAFLDRRWNDLVRWHRWLAECRDQNERGRVTLYHGWESGMDNSPRWDSAYANVIPGDVPEYQREDNTIVT DASQRPSDMEYDRYLWLLEEMKAARYDDQLLSKVMSFAVEDVFVSAILAVACQVLAEIGEDHKRPNSDVR DLYAWADRFRAGVIATTDERTGAAKDYDVRAERWIATETAAQFAPLLCGGLPHDRERALLRLLEGPRFCG HPDLAYALIPSTSPVSRDFRPREYWRGPVWPVMTWLFAWCFARRGWAERAATLRREGLRQASDGTFAEYY EPFTGEPLGSMQQSWTAAAVLDWLG*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_6050 | - | - | 100% (446) | hypothetical protein Mvan_6050 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_0855 | - | 0.0 | 91.93% (446) | hypothetical protein Mflv_0855 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4920c | - | 0.0 | 77.80% (446) | hypothetical protein MAB_4920c |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_6914 | - | 0.0 | 88.57% (446) | hypothetical protein MSMEG_6914 |
| M. thermoresistible (build 8) | TH_0507 | - | 0.0 | 84.93% (418) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_6050|M.vanbaalenii_PYR-1 MPHDTSFAPTQLAARAAYLLRGNDLGVMTTAAPLLYPHMWSWDAAFVAIG
Mflv_0855|M.gilvum_PYR-GCK MPHDPSFAPTQLAARAAYLLRGNDLGTMTTAAPLLYPHMWSWDAAFVAIG
MAB_4920c|M.abscessus_ATCC_199 MPSHPMFTPTQLAARAAYLLRGNDRGTMTSAAPKLYPHMWSWDAAFVAVG
MSMEG_6914|M.smegmatis_MC2_155 MPPDPSFAPTQLAARAAYLLRGNDLGTMTTAAPLLYPHMWSWDAAFVAIG
TH_0507|M.thermoresistible__bu MPPDPSFGPTQLAARAAYLLRGNDLGVMTTAAPLLYPHMWSWDAAFVAIG
** .. * **************** *.**:*** **************:*
Mvan_6050|M.vanbaalenii_PYR-1 LAPLSVERAVVELDTLLSAQWRNGMIPHIVFANGVDGYFPGPARWACSAL
Mflv_0855|M.gilvum_PYR-GCK LAPLSVERAVVELDTLLSAQWRNGMIPHIVFANGVDGYFPGPARWACSAL
MAB_4920c|M.abscessus_ATCC_199 LAPLSVERAVTELDTLLSAQWANGMIPHIVFANGVDGYFPGPARWQTSEL
MSMEG_6914|M.smegmatis_MC2_155 LAPLSVERAVVELDTLLSAQWRNGMIPHIVFANGVDGYFPGPARWATQAL
TH_0507|M.thermoresistible__bu LAPLSVERAVVELDTLLSAQWRNGMIPHIVFANTDDGYFPGPARWAVQAL
**********.********** *********** ********** . *
Mvan_6050|M.vanbaalenii_PYR-1 SPDAPRTRHTSGITQPPVHAIAVQRILDHARTRGRSTRAVAQAFLDRRWN
Mflv_0855|M.gilvum_PYR-GCK SPDAPRGRHTSGITQPPVHAIAVQRILDRARTRGRSTRAVAEAFLDRRWS
MAB_4920c|M.abscessus_ATCC_199 AANAPSGYQTSGITQPPVHAIAVQRILDHARRRGRSARGIAEAFLDRRWT
MSMEG_6914|M.smegmatis_MC2_155 AANAPRIRHTSGITQPPVHAIAVQRILDQARNRGRSTRAVAAAFLDRRWS
TH_0507|M.thermoresistible__bu TDNAPRTRHTSGITQPPVHAIAVQRIVDHARTRGRTTRRVVAAFIDRRWD
: :** :*****************:*:** ***::* :. **:****
Mvan_6050|M.vanbaalenii_PYR-1 DLVRWHRWLAECRDQNERGRVTLYHGWESGMDNSPRWDSAYANVIPGDVP
Mflv_0855|M.gilvum_PYR-GCK DMVRWHRWLAESRDPDGHGRITMYHGWESGMDNSPRWDSAYANVIPGEVP
MAB_4920c|M.abscessus_ATCC_199 DLMRWHRWLAETRDQNQHGRITLYHGWESGMDNSPRWDGAYANVVPGELP
MSMEG_6914|M.smegmatis_MC2_155 DLVRWHRWLAEKRDPDGHGRITLYHGWESGMDNSPRWDSAYANVVPGNVP
TH_0507|M.thermoresistible__bu DLVRWHRWLAECRDPEERGRITLYHGWESGMDNSPRWDSAYANVIPGKLP
*::******** ** : :**:*:***************.*****:**.:*
Mvan_6050|M.vanbaalenii_PYR-1 EYQREDNTIVTDASQRPSDMEYDRYLWLLEEMKAARYDDQLLSKVMSFAV
Mflv_0855|M.gilvum_PYR-GCK EYQREDNKINTDATQRPSDLEYDRYLWLLEEMKTARYDDGLLSKTVSFAV
MAB_4920c|M.abscessus_ATCC_199 PYTRADTAIVTDPSQRPKDAEYDVYLWLLEEMKSVRYDDARLPDAMSFAM
MSMEG_6914|M.smegmatis_MC2_155 EYQREDNTIVTDATQRPSDLEYDRYLWLLEEMKSVRYDDDLLPKVMSFAV
TH_0507|M.thermoresistible__bu HYRRADNTIVTDPTQRPSDSEYDRYLWLLEEMKAARYDDDLLRKVMSFAV
* * *. * **.:***.* *** *********:.**** * ..:***:
Mvan_6050|M.vanbaalenii_PYR-1 EDVFVSAILAVACQVLAEIGEDHKRPNSDVRDLYAWADRFRAGVIATTDE
Mflv_0855|M.gilvum_PYR-GCK EDVFVSAIFSVACQVLAEIGEDHKRPRADVRDLYAWAERFRTGVIATTDE
MAB_4920c|M.abscessus_ATCC_199 EDVFVSAIFSVACEVLATIGEEHARPRADVRELHGWAERFRQGVLDTTEE
MSMEG_6914|M.smegmatis_MC2_155 EDVFVSAIFSVACQVLAEIGEDHKRPHADVRDLYAWADRFRAGVIDSTDD
TH_0507|M.thermoresistible__bu EDVFVSAIFSVACTVLAEIGEDHQRPAADVRELYEWADRFRAGVVASTDE
********::*** *** ***:* ** :***:*: **:*** **: :*::
Mvan_6050|M.vanbaalenii_PYR-1 RTGAAKDYDVRAERWIATETAAQFAPLLCGGLPHDRERALLRLLEGPRFC
Mflv_0855|M.gilvum_PYR-GCK RSGAAKDYDVRAEKWIVTETVAQFAPLLCGGLPHERERALLRLLEGPRFC
MAB_4920c|M.abscessus_ATCC_199 RSGAARDFDVKTGKWVATDTVAVFAPLLSGGMPRPQELALLRLLEGPRFC
MSMEG_6914|M.smegmatis_MC2_155 RTGAARDFDVRAGRWVATETVAQFAPLLCGGLPHDKERTLIKRLEGPRFC
TH_0507|M.thermoresistible__bu RTGAARDYDVRADRWVVTETVAQFAPLLCGGLPHDRERALLRLLEGPRFC
*:***:*:**:: :*:.*:*.* *****.**:*: :* :*:: *******
Mvan_6050|M.vanbaalenii_PYR-1 GHPDLAYALIPSTSPVSRDFRPREYWRGPVWPVMTWLFAWCFARRGWAER
Mflv_0855|M.gilvum_PYR-GCK GHPDLAYALIPSTSPVSRDFRPREYWRGPVWPVMTWLFAWCFARRGWAER
MAB_4920c|M.abscessus_ATCC_199 GHPDLRYALVPSTSPVSRDFRPREYWRGPVWPVLTWLFCWAFERRGWSER
MSMEG_6914|M.smegmatis_MC2_155 GHPDLRYSVIPSTSPVSRDFRPREYWRGPVWPVMTWLFSWCFARRGWAER
TH_0507|M.thermoresistible__bu AHPDLKFASIPSTSPVSRDFRPREYWRGPVWPVLNWLFGWCFARRGWAER
.**** :: :***********************:.*** *.* ****:**
Mvan_6050|M.vanbaalenii_PYR-1 AATLRRE---GLRQASDG-----TFAEYYEPFTGEPLGSMQQS-------
Mflv_0855|M.gilvum_PYR-GCK SATLRRE---GLRQASDG-----SFAEYYEPFTGEPLGSMQQS-------
MAB_4920c|M.abscessus_ATCC_199 AFLLRQE---GLRQAGDG-----SFAEYYEPFTGEPLGSMQQS-------
MSMEG_6914|M.smegmatis_MC2_155 ARLLRQE---GLRQASDG-----TFAEYYEPFTGEPLGSMQQS-------
TH_0507|M.thermoresistible__bu ARMLRPEXSARRNRSSDGGDHPVRVLGQVQPGESQHLPSPQDDRVLPGPV
: ** * .::.** . :* .: * * *:.
Mvan_6050|M.vanbaalenii_PYR-1 ---WTAAAVLDWLG--------------------------------
Mflv_0855|M.gilvum_PYR-GCK ---WTAAAVLDWLG--------------------------------
MAB_4920c|M.abscessus_ATCC_199 ---WTAAAVLDWLG--------------------------------
MSMEG_6914|M.smegmatis_MC2_155 ---WTAAAVLDWLG--------------------------------
TH_0507|M.thermoresistible__bu AVEVVAVAVIRQPVDLDRHPAGRKCDIDLVTTDRVIRCPAADPGAS
.*.**: