For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. vanbaalenii PYR-1 Mvan_5877 (-)

annotation: phosphonate ABC transporter, periplasmic phosphonate-binding protein
coordinates: 6262238 - 6263128
length: 296

SGRRIVTGAVALLSAAAVAVGCSSQPSEEEQAGTVRFAVTDLQGLEELQREYGAFETVFEETSGLDVEFF
AVNDRTAAAAAMQADRVDVVFTGPAEYVVIHERTGAEPIVAIERDGYHSCIYTRADSGISSLDQLRGKKI
AMSDVGSTSGHLGPSQMLKDAGVEPTTELEVLTVGDAVHEALKRGDVDAVGIGCHDYEEFMAADDAGRYL
LIEEGPILPPDLLVGRKGLDPETVATIQTTFEEHFDELLTAMLEGKDNAKYANAKLVEVTDQDYDRVRSM
YQAVGVNDFSQFLGD*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_5877--100% (296)phosphonate ABC transporter, periplasmic phosphonate-binding protein
M. vanbaalenii PYR-1Mvan_2904-2e-1426.09% (322) phosphonate ABC transporter, periplasmic phosphonate-binding
M. vanbaalenii PYR-1Mvan_5884-3e-0524.70% (166) hypothetical protein Mvan_5884

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCK-----
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2241-7e-0529.17% (120) putative nitrate ABC transporter, periplasmic protein
M. marinum M-----
M. avium 104-----
M. smegmatis MC2 155MSMEG_0649-3e-1628.03% (314) phosphonate-binding periplasmic protein
M. thermoresistible (build 8)TH_4099-1e-12674.07% (297) PUTATIVE phosphonate ABC transporter, periplasmic
M. ulcerans Agy99-----

CLUSTAL 2.0.9 multiple sequence alignment


Mvan_5877|M.vanbaalenii_PYR-1       ---MSGRRIVTGAVALLSAAAVAVGCSSQPSEEEQ--AGTVRFAVTDLQG
TH_4099|M.thermoresistible__bu      ---MSGRRIFVGAAAALTAAAVVVGCGSESTSEPR--GGTVRLAVTDLQG
MSMEG_0649|M.smegmatis_MC2_155      MKIRAHHKIATAAACVALLASACSGSDKPQSTTAEGFPETITLAAIPAEN
MAB_2241|M.abscessus_ATCC_1997      --MKRTALLASMLIALATGCSLDSGSGSSQEVTVVIGYQSKTINTVTAGT
                                            :     .    .:   *...           :  : .     

Mvan_5877|M.vanbaalenii_PYR-1       LEELQREYGAFETVFEETSGLD--VEFFAVNDRTAAAAAMQADRVDVVFT
TH_4099|M.thermoresistible__bu      LEELQREFGAFKDTFEERSGLR--IDFFAVTDRTAAAAALQADRVDVVFT
MSMEG_0649|M.smegmatis_MC2_155      SSDLKASYDPLIKMLEKQTGSK--VEFVQASDYAGVVEGMIAGNVDLAFF
MAB_2241|M.abscessus_ATCC_1997      LLRAQGYLEKRLGDLTSRTGTKYTVQWQDYDTGAPITAQMLAEKIDIGSM
                                        :         : . :*    :::      :  .  : * .:*:   

Mvan_5877|M.vanbaalenii_PYR-1       GPAEYVVIHER-TGAEPIVAIERD-----GYHSCIYTRADSG--ISSLDQ
TH_4099|M.thermoresistible__bu      GPAEYVVIHER-TGAEPIVAFERD-----NYRSCIYTTADSG--ITEVEQ
MSMEG_0649|M.smegmatis_MC2_155      GPFAYVVAGVNGAKMTPLGAVIKDEGGAPGYQSYGLARADEDN-INGLKD
MAB_2241|M.abscessus_ATCC_1997      GDYPLLINGSKTQANEKARTELVSITGYNAKGSLNMVVVPPNSAITELPE
                                    *    ::   .        :   .        *   . .  .  *. : :

Mvan_5877|M.vanbaalenii_PYR-1       LRGKKIAMSDVGSTSGHLGPSQ-MLKDAGVEPTTELEVLTVGDAVHEALK
TH_4099|M.thermoresistible__bu      LRGTKIAMTDVGSTSGHLGPSQ-MLVDAGLNPGADIEVLTIGDAVHAALK
MSMEG_0649|M.smegmatis_MC2_155      FAGKKVCFVDPGSTSGFLYPTAGLIEEGVVKSGSEADISAAMSPIFAGGH
MAB_2241|M.abscessus_ATCC_1997      LKGKKVSAS-VGSAG--HGTLVRALRNDGLDPTRDVEVLNQQPQVGASAL
                                    : *.*:.    **:.    .    : :  :..  : ::      :  .  

Mvan_5877|M.vanbaalenii_PYR-1       R-GDVDAVGIG----------CHDYEEFMAAD-DAGRYL-----------
TH_4099|M.thermoresistible__bu      R-GDVAAVGVG----------CHDYEEFLADEADPERFP-----------
MSMEG_0649|M.smegmatis_MC2_155      D-SSALAIANGDCDAGFAFDTMVDKTMIDKGDLKPGQLK-----------
MAB_2241|M.abscessus_ATCC_1997      ESGQVQALSQFVAWPGLLVFQNKAKLLYDGAELNVPTFHGVVVRRDYATQ
                                      ... *:.                      : .                

Mvan_5877|M.vanbaalenii_PYR-1       ----------------------------LIEEGPILPPDLLVGRKG----
TH_4099|M.thermoresistible__bu      ----------------------------LLEEGPVLPPDLLMARAG----
MSMEG_0649|M.smegmatis_MC2_155      ----------------------------TVWKSDMIAGSVFAANDA----
MAB_2241|M.abscessus_ATCC_1997      HPEVLDAFLQAQLDATDFIHEKSLEAARIVAEGSGLPQEVVYLYNGPGGT
                                                                 : :.  :. .:.    .    

Mvan_5877|M.vanbaalenii_PYR-1       -----LDPETVATIQTTFEE------------------------------
TH_4099|M.thermoresistible__bu      -----LDEQTIDTIRDTFTG------------------------------
MSMEG_0649|M.smegmatis_MC2_155      -----LGPEVIDKLKTMFAQDANV-------------------------K
MAB_2241|M.abscessus_ATCC_1997      SFDATLKPSLIEAFTSDVPYLKSIGDFADLNIDDFVHDGPLRQAYTTRAK
                                         *  . :  :   .                                

Mvan_5877|M.vanbaalenii_PYR-1       HFDELLTAMLE---------------------------------------
TH_4099|M.thermoresistible__bu      HYDELLAAMLE---------------------------------------
MSMEG_0649|M.smegmatis_MC2_155      SFEEEGFCEGD---------------------------------------
MAB_2241|M.abscessus_ATCC_1997      NYETELAAMVNPLVLHPADGADPGQAAEIWFDGKDSTQVYPTAQELLKAV
                                     ::    .  :                                       

Mvan_5877|M.vanbaalenii_PYR-1       GKDNAKYANAKLVEVTDQDY------DRVRSMYQAVGVNDFSQFLGD---
TH_4099|M.thermoresistible__bu      GKDNAKYQNAELVEVTDRDY------DEVRSMYRAVGVDDFSEFLGN---
MSMEG_0649|M.smegmatis_MC2_155      ACRITDERAWGVVPVTDADY------DGVRHVCDVTGSEKCKG-------
MAB_2241|M.abscessus_ATCC_1997      NAANAAGRKVRAAYVADTELGTRWFADHARWVQDPAGLHPFTTGAGAARY
                                        :       . *:* :       * .* :   .* .  .        

Mvan_5877|M.vanbaalenii_PYR-1       --------------------
TH_4099|M.thermoresistible__bu      --------------------
MSMEG_0649|M.smegmatis_MC2_155      --------------------
MAB_2241|M.abscessus_ATCC_1997      VAAHPGARPLDYAQALAAAS