For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPTLVQPRLPEPRGPISMSVMELLAERAPLRHFVKVETSLADADPAGLDLQLALYVCYELHYRGFADVDA AWEWNAGLLYLRGRLEELFLEDIRKGVGTIEPDAGALEELDKLCVEPVNGDGPSYHLRDKGTWDEMREYF AHRSLYHLKEGDPHAWAIPRLTGQAKASFVAVEFDEFGAGKGARLHQQLFADLMAAAGLDTSYLGYLGNV PAETLAVVNLMSMFGLHRRLRGCAVGHFAATEVTSPPGSRRMVQALERLGAPQECRGFYAEHVEADAVHE QVVRTDVVGDLVSREPGLDRDVVFGIRAFDLVENRLADHLMSCWRDGRTSLRRPLD
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_5789 | - | - | 100% (336) | hypothetical protein Mvan_5789 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1041 | - | 1e-173 | 87.24% (337) | hypothetical protein Mflv_1041 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2508 | - | 1e-116 | 62.12% (330) | hypothetical protein MAB_2508 |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_0429 | - | 1e-133 | 68.28% (331) | hypothetical protein MAV_0429 |
| M. smegmatis MC2 155 | MSMEG_1773 | - | 1e-137 | 69.35% (336) | hypothetical protein MSMEG_1773 |
| M. thermoresistible (build 8) | TH_1708 | - | 1e-136 | 69.18% (331) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_5789|M.vanbaalenii_PYR-1 -MPTLVQP-------RLPEPRGPISMSVMELLAERAPLRHFVKVETSLAD
Mflv_1041|M.gilvum_PYR-GCK MMPTLVQPP------TLPEPRGPISMSVIDLLAERAPLRYLAKVETSLAD
MAV_0429|M.avium_104 -MTRTSIP----TQPVLPSAHGPLSTAVRCALTGPPSVDHLARIGASVRD
TH_1708|M.thermoresistible__bu -LPSTSAAPRKFAEPRLPTAVGPLSAAVINVLAERPPRRTLIRIDAPIGD
MSMEG_1773|M.smegmatis_MC2_155 -MMTIPTT----LQPPLPDAQGRISAAVISELKGRAPHNHLEPVWVPLRD
MAB_2508|M.abscessus_ATCC_1997 -MIAAEP--------RLPQPRGPLSAVVIDLLAKGSPSAHPDDVEEMLAA
: ** . * :* * * .. : :
Mvan_5789|M.vanbaalenii_PYR-1 ADPAGLDLQLALYVCYELHYRGFADVDAAWEWNAGLLYLRGRLEELFLED
Mflv_1041|M.gilvum_PYR-GCK ADPAGIDLQLALYTCYELHYRGFDKVDSGWEWNAGLLYLRGHLEDLFLAD
MAV_0429|M.avium_104 SDPYGLDLQLALAMCYELHYRGFTGVDPAWEWNPALLALRAELERVFLAG
TH_1708|M.thermoresistible__bu ADPYGLDLQLALYTCYELHYRGFAGVDPRWEWNPALLHLRGQLEDAFLAA
MSMEG_1773|M.smegmatis_MC2_155 ADPLGLDIQLALYVCYELHYRGFDGVDPDWEWSAGLLHLRSQLERAFLEA
MAB_2508|M.abscessus_ATCC_1997 ANPYGLDLQLALYVCYELHYRGFSGVDPRWEWDIGLLNLRRRMEEDFLAR
::* *:*:**** ********* **. ***. .** ** .:* **
Mvan_5789|M.vanbaalenii_PYR-1 IRKGVGTIEPDAGALEELDKLCVEPVNG----DGPSYHLRDKGTWDEMRE
Mflv_1041|M.gilvum_PYR-GCK VRKQVGEIEPDATALDELDALCVEPVNG----DGPSYYLRDEGTWDQMRE
MAV_0429|M.avium_104 VRRDVGPIDPDRTAADEMDAIAAEPVEG----TGPSYHLRDRGSWQQMCE
TH_1708|M.thermoresistible__bu VRRDVGPIESDVTAADEMERLAREPVDGHPDATGPSYHLRDSGTWEQMRE
MSMEG_1773|M.smegmatis_MC2_155 VRKEIGTIPSDVTAASEMERLSVEPVDG----NGPSYFLRDHGTWEQMRE
MAB_2508|M.abscessus_ATCC_1997 LESDAGQDSHEYAIAAELDALMREPEDD----ANLSVHLAEYASWEHMQE
:. * : *:: : ** :. . * .* : .:*:.* *
Mvan_5789|M.vanbaalenii_PYR-1 YFAHRSLYHLKEGDPHAWAIPRLTGQAKASFVAVEFDEFGAGKGARLHQQ
Mflv_1041|M.gilvum_PYR-GCK YFAHRSLYHLKEGDPHAWAIPRLTGQAKASFVAVEFDEFGAGKGARLHQQ
MAV_0429|M.avium_104 YFVHRSLYHLKEGDPHAWAIPRLTGTAKAAFVAVEFDEYGAGQGPRLHQQ
TH_1708|M.thermoresistible__bu YFIHRSLYHLKEADPHAFAIPRLIGQAKASFVAVEFDEYGGGRGPRVHQE
MSMEG_1773|M.smegmatis_MC2_155 YFVHRSLYHLKEGDPHAWLIPRISGQAKASFVAIEYDEYGAGHGNHLHQQ
MAB_2508|M.abscessus_ATCC_1997 YFAQRSIYHLKEGDPQAWVIPRLSGQAKASFVAIEFDEFGGGHGNALHQS
** :**:*****.**:*: ***: * ***:***:*:**:*.*:* :**.
Mvan_5789|M.vanbaalenii_PYR-1 LFADLMAAAGLDTSYLGYLGNVPAETLAVVNLMSMFGLHRRLRGCAVGHF
Mflv_1041|M.gilvum_PYR-GCK LFADLMAAADLDTTYLGYLDHVPAEALAVVNLMSMFGLHRRLRGCAVGHF
MAV_0429|M.avium_104 LFADLLAAAGLDTTYWGYIDAVPAESLAVVNLMSLFGLHRALRGAAIGHF
TH_1708|M.thermoresistible__bu LYADLLEAAGLDTTYLGYIDAVGADTLATVNLMSLFGLHREFRGAAVGHF
MSMEG_1773|M.smegmatis_MC2_155 LFADLMEAADLDTTYLGYIGHVPAESLALVNLMSMFGLHRKLRGAAAGHF
MAB_2508|M.abscessus_ATCC_1997 LFGDLLAAAGMDPEYLGYLEHAAAESLAAVNVMSLFGLHRALRGAAIGHF
*:.**: **.:*. * **: . *::** **:**:***** :**.* ***
Mvan_5789|M.vanbaalenii_PYR-1 AATEVTSPPGSRRMVQALERLGAPQECRGFYAEHVEADAVHEQVVRTDVV
Mflv_1041|M.gilvum_PYR-GCK AATEVTSPPGSRRMVQALERMGAPTECRAFYEEHVEADAVHEQVVRTDVV
MAV_0429|M.avium_104 AATEITSPPGSARMVRALQRMQAPPACITFYSEHVEADAVHEQVVRLDVV
TH_1708|M.thermoresistible__bu ASTEITSSPGSRRLVQALQRLGAPEACIAFYAEHVEADAVHEQVVRTDVV
MSMEG_1773|M.smegmatis_MC2_155 AATEITSSPGSQRLTAALKRLGAPEPCVRFYAEHVEADAVHEQVVRLNVI
MAB_2508|M.abscessus_ATCC_1997 AATEITSPPGSRQMVRGLRRLSAPSPCVDFYQEHVEADAVHEEVVRSDVV
*:**:**.*** ::. .*.*: ** * ** **********:*** :*:
Mvan_5789|M.vanbaalenii_PYR-1 GDLVSREPGLDRDVVFGIRAFDLVENRLADHLMSCWRDGRTSLRRPLD--
Mflv_1041|M.gilvum_PYR-GCK GDLVQREPDLDQDVVFGIRAFDAVENRLAEHLMRSWRDGRSSLRRALD--
MAV_0429|M.avium_104 GDLVAREPELQRDVVFGIRAHAAVEDRLADTIMASWQQGRSSLRRPLDRP
TH_1708|M.thermoresistible__bu GDLVAREPRLDRDVVFGIRAHAVVEDRLAGHLMACWNAGRSSLRH-----
MSMEG_1773|M.smegmatis_MC2_155 GDLVEREPELDADVVFGIRAFDALEDRLADHLMKNWAADRSSLSRPLDD-
MAB_2508|M.abscessus_ATCC_1997 ANLVETEPGLSGRVVFGMRVFRMMEDRLAHHLLSSWALGRTSLNRALS--
.:** ** *. ****:*.. :*:*** :: * .*:** :
Mvan_5789|M.vanbaalenii_PYR-1 --
Mflv_1041|M.gilvum_PYR-GCK --
MAV_0429|M.avium_104 SP
TH_1708|M.thermoresistible__bu --
MSMEG_1773|M.smegmatis_MC2_155 --
MAB_2508|M.abscessus_ATCC_1997 --