For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VASKPSAKSLAWPLFDALVDQSPFRTVNPWKADGTFAPDYATLRKLLAVPLLLGAESRSGVPALALDVWV AYELRRAGLDPDAVWPRAEAPRVVDRDVLAFIRSVPKNAGRDELLARLRKGAATGGVGAASANIAGKNYF KQVDVIMSSWQTGPELLISTKRMDSSFGKNAANRVEESYGDAKNLALRHPLAALGFMYSLRSTAYTEERR QFDWIVDLLTKLGREEDAYDACALVVPEWVGEPLIPDLGPPEPDDAVLDLFDVDIEDVDRESTADTATQL AALPDVTLRTDLVPDELSPARFFEVMLTIVLDNSNITQHEEARLRRSRAVG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5446 | - | - | 100% (331) | hypothetical protein Mvan_5446 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1344 | - | 1e-154 | 83.43% (332) | hypothetical protein Mflv_1344 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_3214 | - | 6e-91 | 53.10% (339) | hypothetical protein MSMEG_3214 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_5446|M.vanbaalenii_PYR-1 MASKPSAKSLAWPLFDALVDQSPFR--TVNPWKADG---TFAPDYATLRK Mflv_1344|M.gilvum_PYR-GCK MAGKPSAKALAWPLFDAIVDQSAFK--SVNPWAADG---SFSPDYGALRK MSMEG_3214|M.smegmatis_MC2_155 MPAEPSTKATAWAIFDRIVADAAPGGVHTNPWLRNGNALTYVPDFRVLRK *..:**:*: **.:** :* ::. .*** :* :: **: .*** Mvan_5446|M.vanbaalenii_PYR-1 LLAVPLLLGAESRSGVPALALDVWVAYELRRAGLDPDAVWPRAEAPRVVD Mflv_1344|M.gilvum_PYR-GCK LLAVPILLGAESRSGVPALALDVWVAYELRRAGLEPDAVWPRAEAPRVVD MSMEG_3214|M.smegmatis_MC2_155 LLAVPLYLDAPSTTGVPALALDVWLSYELRRAGFDSDAVWPRASDPRIMP *****: *.* * :**********::*******::.*******. **:: Mvan_5446|M.vanbaalenii_PYR-1 RDVLAFIRSVPKNAGRDELLARLRKGAATGGVGAASANIAGKNYFKQVDV Mflv_1344|M.gilvum_PYR-GCK RDVLNFVRSIPKSAGRDELMERLRTGTS-GGVGAASANIAGKNYFKQVDV MSMEG_3214|M.smegmatis_MC2_155 GAISSLLEALPQ---KERLLIEQRLRRSMKGVSGSSASVLGKHYMKQVDV : ::.::*: ::.*: . * : **..:**.: **:*:***** Mvan_5446|M.vanbaalenii_PYR-1 IMSSWQTGPELLISTKRMDSSFGKNAANRVEESYGDAKNLALRHPLAALG Mflv_1344|M.gilvum_PYR-GCK IMSSWQTGPELLISTKRMDSSFGKNAANRVEESYGDAKNLALRHPLAALG MSMEG_3214|M.smegmatis_MC2_155 VMSDWDTGPELLISTKRMDSSFGKNAANRVEESYGDAKNLRLRHPLAALG :**.*:********************************** ********* Mvan_5446|M.vanbaalenii_PYR-1 FMYSLRSTAYTEERRQFDWIVDLLTKLGREEDAYDACALVVPEWVGEPLI Mflv_1344|M.gilvum_PYR-GCK FMYSLRSTAYTEERRQFDWIVDLLIKLGREADAYDACALVVPEWEGDAPP MSMEG_3214|M.smegmatis_MC2_155 FVYGLRSTILSTEPDKAEWLIDLLGKLGTEDDAYHAVALVMIDHDAEVSE *:*.**** : * : :*::*** *** * ***.* ***: : .: Mvan_5446|M.vanbaalenii_PYR-1 PDLGPPEPDDAVLDLFDVDIEDVDRE----STADTATQLAALPDVTLRTD Mflv_1344|M.gilvum_PYR-GCK DPVQPP--DDAILELFEVDFGDDAGDEQEAAVTDVAAQLAALPEVTLRTD MSMEG_3214|M.smegmatis_MC2_155 P--------DDEVDSLEKAEPDTLFEIVDVETAKVDEALAALPDIAIRHD * :: :: * : .:.. *****::::* * Mvan_5446|M.vanbaalenii_PYR-1 LVPDELSPARFFEVMLTIVLDNSNITQHEEARLRRSRAVG- Mflv_1344|M.gilvum_PYR-GCK LVPDELSPARFFAVMLTIVLDNSNITQHEEARRRRSRL--- MSMEG_3214|M.smegmatis_MC2_155 AVPEQLQPARFLQTMVARVLDVSPVTRHREARFRRNTAPQM **::*.****: .*:: *** * :*:*.*** **.