For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SHPSTRISRLAEKQSASRAELNALLDATPLATIALVRDGHPVVFPTGFARIGDSLVIHGSTGSPWMRAVA DGAAVAVSVTTLDGVVVARSAFESSFHYRSAVLFGTFDVVGAEQKTAYLEALTDTFIPGRVAELRPSSRR ELAATMVLRLAIGDDNWSLKVSGGWPDDPEEDVAAGAWAGVVPLATSYGEPRRAPDCPAEVPTPRSVLAM TGELANHRR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_4367 | - | - | 100% (220) | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1356 | - | 3e-31 | 37.89% (190) | hypothetical protein MAB_1356 |
| M. marinum M | MMAR_2375 | - | 2e-31 | 41.09% (202) | hypothetical protein MMAR_2375 |
| M. avium 104 | MAV_3215 | - | 6e-30 | 40.19% (209) | flavin-nucleotide-binding protein |
| M. smegmatis MC2 155 | MSMEG_4975 | - | 4e-87 | 70.78% (219) | flavin-nucleotide-binding protein |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_1551 | - | 1e-21 | 41.50% (147) | hypothetical protein MUL_1551 |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_4367|M.vanbaalenii_PYR-1 ------------MSHPSTRISRLAEKQSASRAELNALLDATPLATIALVR
MSMEG_4975|M.smegmatis_MC2_155 -----MTD----VSKPSTRVTRLDEKQSTSRERLDDLLDTIPLATVALVR
MMAR_2375|M.marinum_M -----MTTS--YGPTARTTPTRYRERARYDSETVHRILDEALICHLGYIR
MUL_1551|M.ulcerans_Agy99 -----MTTS--YGPTARTTPTRYRELARYDSETVHRILDEALICHLGYIR
MAV_3215|M.avium_104 -----MSTEADYQPTPRSTPTRYRERARYDRRTVHRILDEALICHLGYLS
MAB_1356|M.abscessus_ATCC_1997 MTVSTTNTDDQLRDSPDLLVHRYKWLQRRERADLFAILDAGTIAHVGFVR
. * . : :** :. :. :
Mvan_4367|M.vanbaalenii_PYR-1 -DGHPVVFPTGFARIGDSLVIHGSTGS-PWMRAVADG-----AAVAVSVT
MSMEG_4975|M.smegmatis_MC2_155 -DGHPVAFPIGFGRVGDELVIHGSTGS-PWLRALAEG-----APAAVSVT
MMAR_2375|M.marinum_M -DGEPVVLPTTHTRRGETLYIHGSTGSGPMLAARVAE-----LPLCVTVT
MUL_1551|M.ulcerans_Agy99 -DGEPVVLPTTHTRRGETLYIHGSTGSGPMLAARVAE-----LPLCITVT
MAV_3215|M.avium_104 -GGRPVVLPTTHARRGETLYLHGSTGGGPVLAARAAAAAGAGLPVCVTVT
MAB_1356|M.abscessus_ATCC_1997 PDGKPMVIPMAYARDGEFLLMHGSSGS-GLTRSAVAG-----VELVATIS
.*.*:.:* . * *: * :***:*. : . :::
Mvan_4367|M.vanbaalenii_PYR-1 TLDGVVVARSAFESSFHYRSAVLFGTFDVVGA-EQKTAYLEALTDTFIPG
MSMEG_4975|M.smegmatis_MC2_155 ALDGVVVARSSFESSFRYRSATLFGTFEVIAD-DAKRGYLDALTDRFIPG
MMAR_2375|M.marinum_M LVDGLVLARSAMHHSLNYRSVMVLGTARVVEDPDEKLLALHALLDHIQAG
MUL_1551|M.ulcerans_Agy99 LVDGLVLARSAMHHSLNYRSVMVLGTARVVEDPDEKLLALHALLDHIQAG
MAV_3215|M.avium_104 LVDALVLARAAMHHSVNFRSVVVLGDARVVDDPAEKSRALSSLLDHIAPG
MAB_1356|M.abscessus_ATCC_1997 IFDGLVYAQSLFDSTVNYRCAMVFGRAVPVTE-REREDCIRVISERLMPG
.*.:* *:: :. :..:*.. ::* : : : : : : .*
Mvan_4367|M.vanbaalenii_PYR-1 RVAELRPSSRRELAATMVLRLAIGDDNWSLKVSGGWPDDPEEDVAAGAWA
MSMEG_4975|M.smegmatis_MC2_155 RTAELRASTRKELAATLALALAIGDDNWSLKLSEGWPDDADEDIAAGGWA
MMAR_2375|M.marinum_M RAADCRGPNPRELAATTVLALDLAEA--SAKVRSGGPVDDPQDHALPHWA
MUL_1551|M.ulcerans_Agy99 RAADCRGPNPRELAATT---------------------------------
MAV_3215|M.avium_104 RAADCRAPDARELAATGVLALDLAEV--SAKVRSGPPVDDPQDRALPHWA
MAB_1356|M.abscessus_ATCC_1997 RWTEVRPPTKRELAATYVLRMPLDMS--SVKVREGQP---TEDARSGIWT
* :: * . :*****
Mvan_4367|M.vanbaalenii_PYR-1 GVVPLATSYGEPRRAPDCPAEVPTPRSVLAMTGELANHRR----
MSMEG_4975|M.smegmatis_MC2_155 GVVPLTTQYGAPLTAPDVAAGTPLPPSVRGMTGELRNTRAR---
MMAR_2375|M.marinum_M GVVPLALRAGTPEPAADLDPATPLPAYLR---------------
MUL_1551|M.ulcerans_Agy99 -----ALRAGTPEPAADLDPATPLPAYLR---------------
MAV_3215|M.avium_104 GVVPLQLSAGPPVPAPDLDPAVPLPGYLG---------------
MAB_1356|M.abscessus_ATCC_1997 GYLPFESVVGEPVPQLGVDIVPAQSITMAADVWKQRLRRPTSAE
* * . . . :