For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TETFDCTDPEQRDTGIASAISALKGGRLVVMPTDTVYGIGADAFDGEAVAALLAAKGRGRNMPVPVLVGS WHTIQGLVYSVPNSAKELIRAFWPGALSLVVRQAPSLQWDLGDANGTVMLRMPLHPVAIELLREVGPMAV SSANISGRPPAVTAAQAREQLGDLVEVYLDGGPAEQQAASTIVDLTGAHPRVLREGPVTLDAIADVLGVD AATLTAQPD*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_4337 | - | - | 100% (220) | Sua5/YciO/YrdC/YwlC family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1333 | - | 7e-98 | 81.40% (215) | hypothetical protein Mb1333 |
| M. gilvum PYR-GCK | Mflv_2309 | - | 1e-107 | 91.55% (213) | Sua5/YciO/YrdC/YwlC family protein |
| M. tuberculosis H37Rv | Rv1301 | - | 2e-97 | 81.40% (215) | hypothetical protein Rv1301 |
| M. leprae Br4923 | MLBr_01136 | - | 7e-90 | 76.04% (217) | hypothetical protein MLBr_01136 |
| M. abscessus ATCC 19977 | MAB_1444 | - | 2e-82 | 70.81% (209) | hypothetical protein MAB_1444 |
| M. marinum M | MMAR_4096 | - | 1e-95 | 80.09% (216) | hypothetical protein MMAR_4096 |
| M. avium 104 | MAV_1518 | - | 6e-91 | 75.81% (215) | Sua5/YciO/YrdC/YwlC family protein |
| M. smegmatis MC2 155 | MSMEG_4948 | - | 6e-97 | 81.48% (216) | Sua5/YciO/YrdC/YwlC family protein |
| M. thermoresistible (build 8) | TH_1565 | - | 9e-99 | 80.93% (215) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_3963 | - | 3e-96 | 80.18% (217) | hypothetical protein MUL_3963 |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_4337|M.vanbaalenii_PYR-1 ---MTE-TFDCTDPEQRDTGIASAISALKGGRLVVMPTDTVYGIGADAFD
Mflv_2309|M.gilvum_PYR-GCK ---MSQGLFDCADPAQRATGIASAISALKEGRLVVMPTDTVYGIGADAFD
Mb1333|M.bovis_AF2122/97 ---MTE-TFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFD
Rv1301|M.tuberculosis_H37Rv ---MTE-TFDCADPEQRSRGIVSAVGAIKAGQLVVMPTDTVYGIGADAFD
MLBr_01136|M.leprae_Br4923 MVRMNE-VFDCADPDQRARGIASAVAALKGGRLVVMPTDTVYGIGADAFD
MAV_1518|M.avium_104 ---MSD-VFDCADPDQRSRGIAAAAAAVKGGRLVVMPTDTVYGIGADAFN
MMAR_4096|M.marinum_M ---MSE-VFDCADPDQRSNGIASAAGALKAGRLVVMPTDTVYGIGADAFD
MUL_3963|M.ulcerans_Agy99 ---MSE-VFDCADPDQRSNGIASAAGALKAGRLVVMPTDTVYGIGADAFD
TH_1565|M.thermoresistible__bu ---MSE-VFDCADPDQRKIGITSAVSALKGGRLVVMPTDTVYGLAADAFD
MSMEG_4948|M.smegmatis_MC2_155 ---MTQ-LFDCADAEQRAIGIASAVSAVKGGRLVVMPTDTVYGIGADAFD
MAB_1444|M.abscessus_ATCC_1997 ---MTV-VYDCQDAATRQSGIDAAVSALKAGELVVMPTDTVYGLGCDAFD
*. :** *. * ** :* .*:* *.***********:..***:
Mvan_4337|M.vanbaalenii_PYR-1 GEAVAALLAAKGRGRNMPVPVLVGSWHTIQGLVYSVPNSAKELIRAFWPG
Mflv_2309|M.gilvum_PYR-GCK GEAVAALLDAKGRGRDMPVPVLVGSWHTISGLVYTVPNSAKELIRAFWPG
Mb1333|M.bovis_AF2122/97 SSAVAALLSAKGRGRDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPG
Rv1301|M.tuberculosis_H37Rv SSAVAALLSAKGRGRDMPVGVLVGSWHTIEGLVYSMPDGARELIRAFWPG
MLBr_01136|M.leprae_Br4923 RAAVAALLSAKGRGRDMPVGVLVGSWHTIEGLVYTMPDGARELIRAFWPG
MAV_1518|M.avium_104 SAAVSALLSAKGRGRDMPVGVLVGSWHTIEGLVYTMPDGARDLIRAFWPG
MMAR_4096|M.marinum_M SAAVNALLSAKGRGRDMPVGVLVGSWHTIEGLVFSMPAGARELIRAFWPG
MUL_3963|M.ulcerans_Agy99 SAAVNALLSAKGRGRDMPVGVLVGSWHTIEGLVFSMPAGARELIRAFWPG
TH_1565|M.thermoresistible__bu SAAVAALLEAKGRGRDMPVPVLVGSWHTIEGLVYTVSEAARELIRAFWPG
MSMEG_4948|M.smegmatis_MC2_155 SGAVGALLAAKGRGRDMPVGVLVGSWTTIDGLVYSVPRAARELIRAFWPG
MAB_1444|M.abscessus_ATCC_1997 SGAVTALLAAKGRGRDMPVGVLVGSWHTIDGLVFAVPAAARELIEAFWPG
** *** ******:*** ****** **.***:::. .*::**.*****
Mvan_4337|M.vanbaalenii_PYR-1 ALSLVVRQAPSLQWDLGDANGTVMLRMPLHPVAIELLREVGPMAVSSANI
Mflv_2309|M.gilvum_PYR-GCK ALSLVVHQAPSLQWDLGDANGTVMLRMPLHPVAIELLREVGPMAVSSANI
Mb1333|M.bovis_AF2122/97 ALSLVVVQAPSLQWDLGDAHGTVMLRMPLHPVAIELLREVGPMAVSSANI
Rv1301|M.tuberculosis_H37Rv ALSLVVVQAPSLQWDLGDAHGTVMLRMPLHPVAIELLREVGPMAVSSANI
MLBr_01136|M.leprae_Br4923 ALSLVVVHAPSLNWDLGDAHGTVMLRMPLHSVAIELLCEVGPMAVSSANV
MAV_1518|M.avium_104 ALSLVVTQAPSLQWDLGDARGTVMLRMPLHPVAIELLREVGPMAVSSANI
MMAR_4096|M.marinum_M ALSLVVVQAPSLQWDLGNAHGTVMLRMPLHPVAIELLRQVGPMAVSSANV
MUL_3963|M.ulcerans_Agy99 ALSLVVVQAPSLQWDLGNAHGTVMLRMPLHPVAIELLRQVGPMAVSSANV
TH_1565|M.thermoresistible__bu ALSLVVQQAPSLHWDLGDAHGTVMLRMPLHPVAIEVLREVGPLAVSSANI
MSMEG_4948|M.smegmatis_MC2_155 ALSLVVHQAPSLQWDLGDTRGSVMLRMPLHPVAIELLREVGPMAVSSANI
MAB_1444|M.abscessus_ATCC_1997 PLSIIVRHAPSLSWDLGDAQGSVMLRMPMHPVAIELLRAVGPMAVSSANV
.**::* :**** ****::.*:******:*.****:* ***:******:
Mvan_4337|M.vanbaalenii_PYR-1 SGRPPAVTAAQAREQLGDLVEVYLDGGPAEQQAASTIVDLTGAHPRVLRE
Mflv_2309|M.gilvum_PYR-GCK SGSPAAVTAAQAREQLGDRVEVYLDGGPAEQQAASTIVDLTGAHPRVLRQ
Mb1333|M.bovis_AF2122/97 SGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIVDLTGATPRVLRQ
Rv1301|M.tuberculosis_H37Rv SGHPPPVDAEQARSQLGDHVAVYLDAGPSEQQAGSTIVDLTGATPRVLRP
MLBr_01136|M.leprae_Br4923 SGQPAAVDVDGARGQLGELVGVYLDAGPSAQQAASTIVDLTEATPRILRA
MAV_1518|M.avium_104 SGHPAAVDADEARGQLGDLVDVYLAAGRAERGAASTIVDLTGATPRILRP
MMAR_4096|M.marinum_M SGQPPAVDVADARNQFGDLVDVYLDGGPAAQQAASTIVDLTGA-PRILRP
MUL_3963|M.ulcerans_Agy99 SGQPPAVDVADARNQFGDLVDVYLDGGPAAQQAASTIVDLTGA-PRILRP
TH_1565|M.thermoresistible__bu SGQPPAVTAAEARNQLGARVEVYLDGGPSPGQAASTIVDLTGPHPRILRA
MSMEG_4948|M.smegmatis_MC2_155 SGRPAAGTATEAREQLGDLVEVYLDGGPAEQQAASTIVDLTGSDPRILRT
MAB_1444|M.abscessus_ATCC_1997 SGRPAALTAAEARGQLDDKVAVYLDGGQAELGAASTIVDLTGPAPVIVRE
** *.. . ** *:. * *** .* : *.******* . * ::*
Mvan_4337|M.vanbaalenii_PYR-1 GPVTLDAIADVLGVDAATLTAQPD------
Mflv_2309|M.gilvum_PYR-GCK GPVTLEAIADVLGVEAQSLLAPTE------
Mb1333|M.bovis_AF2122/97 GPVSTERIAEVLGVDAASLFG---------
Rv1301|M.tuberculosis_H37Rv GPVSTERIAEVLGVDAASLFG---------
MLBr_01136|M.leprae_Br4923 GPVSVARIAEVLGVVPASLIA---------
MAV_1518|M.avium_104 GPVSAQRIAEVLGIDPESLAVPG-------
MMAR_4096|M.marinum_M GPVSAERIADVLGVDATTLTG---------
MUL_3963|M.ulcerans_Agy99 GPVSAERIADVLGVDATTLTA---------
TH_1565|M.thermoresistible__bu GPVTAEAVADVLGVDPATLVGSQSNQPG--
MSMEG_4948|M.smegmatis_MC2_155 GPISAEDVARVLDVEVATLTTSLTE-----
MAB_1444|M.abscessus_ATCC_1997 GPISREQIVEVIGGQVGPVESGESGEPTES
**:: :. *:. .: