For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSKKIEVDFGLCESNAVCMGIIPEVFQVDEQDYLHVLQEDVTPENEAQVNEAVRQCPRQAISIVDK
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4176 | - | - | 100% (66) | hypothetical protein Mvan_4176 |
M. vanbaalenii PYR-1 | Mvan_5849 | - | 3e-10 | 42.37% (59) | FdxD |
M. vanbaalenii PYR-1 | Mvan_5162 | - | 5e-06 | 30.16% (63) | hypothetical protein Mvan_5162 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3533c | fdxD | 2e-10 | 38.98% (59) | ferredoxin FdxD |
M. gilvum PYR-GCK | Mflv_2478 | - | 3e-28 | 83.08% (65) | hypothetical protein Mflv_2478 |
M. tuberculosis H37Rv | Rv3503c | fdxD | 2e-10 | 38.98% (59) | ferredoxin FdxD |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4157c | - | 4e-12 | 52.00% (50) | ferredoxin FdxD |
M. marinum M | MMAR_4734 | fdxD_2 | 8e-20 | 70.00% (60) | ferredoxin FdxD_2 |
M. avium 104 | MAV_0915 | - | 3e-22 | 71.88% (64) | hypothetical protein MAV_0915 |
M. smegmatis MC2 155 | MSMEG_4819 | - | 2e-25 | 76.19% (63) | hypothetical protein MSMEG_4819 |
M. thermoresistible (build 8) | TH_0021 | - | 1e-27 | 80.95% (63) | conserved domain protein |
M. ulcerans Agy99 | MUL_4066 | fdxD | 4e-10 | 41.38% (58) | ferredoxin FdxD |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2478|M.gilvum_PYR-GCK ------------------MTQKIEVDFGLCESNGVCMGIIPEVFDLDEED MSMEG_4819|M.smegmatis_MC2_155 ------------------MTKKIHVDLGLCESNGVCMGVIPEVFDLDEED Mvan_4176|M.vanbaalenii_PYR-1 ------------------MSKKIEVDFGLCESNAVCMGIIPEVFQVDEQD TH_0021|M.thermoresistible__bu ------------------MTKKVEVDFGLCEANGVCMGIIPEVFQLDDQD MMAR_4734|M.marinum_M --------------------MRIEVDWDLCESNGICMGIVAEVFQLGDDD MAV_0915|M.avium_104 ------------------MTKKIEVDWGLCESNGVCMGINPDIFELGDDD Mb3533c|M.bovis_AF2122/97 --------------------MRVIVDRDRCEGNAVCLGIAPDIFDLDDED Rv3503c|M.tuberculosis_H37Rv --------------------MRVIVDRDRCEGNAVCLGIAPDIFDLDDED MUL_4066|M.ulcerans_Agy99 MVLHNDHWLAQVLGKIKEGAVRVIVDRDRCEGNAVCLGIAPDIFDLDD-D MAB_4157c|M.abscessus_ATCC_199 --------------------MRVGVVPDRCEGNLVCLGIAPEVFDVDDDD :: * . **.* :*:*: .::*::.: * Mflv_2478|M.gilvum_PYR-GCK YLHVLQDEVTPENEAQVKEAVRQCPRQAISIKDS MSMEG_4819|M.smegmatis_MC2_155 YLHVLSDEVTPENEARVRDAVRQCPRQAISIDEE Mvan_4176|M.vanbaalenii_PYR-1 YLHVLQEDVTPENEAQVNEAVRQCPRQAISIVDK TH_0021|M.thermoresistible__bu YLHVLQDEVTPENEEQIREAVRQCPRQAISIRE- MMAR_4734|M.marinum_M MLTVLQPEVTPENEELVREAVRQCPRQAISITR- MAV_0915|M.avium_104 MLTVHQEEVTPENEHDVREAVRQCPRQAISIVGE Mb3533c|M.bovis_AF2122/97 YAVVKTDPIPVDQEDLAEQAIAECPRAALSRGE- Rv3503c|M.tuberculosis_H37Rv YAVVKTDPIPVDQEDLAEQAIAECPRAALSRGE- MUL_4066|M.ulcerans_Agy99 YAVVKTDPIPPDQEALAEQAIAECPRAALLRED- MAB_4157c|M.abscessus_ATCC_199 YVVILQEEVPADQEDLVEQAIAECPRAALIRKD- : :. ::* .:*: :*** *: