For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
QQTTEPTAAAHFVTAGGGFTPTRYAQSHWGADHLNGPAVVGLVARGLEKECGSTEFHPTRLTVDLFRAAR NALTTLEIRVVRDGRRVRSAECDVIQDERVVARATLIQYRPSSAPPGDLWQSGATFPAHPDPDGSVKPFV GSDETGWTRSPAEHQNTSRKRFFNDGIAVVAGEDNSPFVRAAMVAEATSLVTNLGTAGVGYINGDLTVAL SRLPVDDWVGIQADSHHAAAGLAVGAATLFDSLGPFGTGLTTAIANPAAQIDFSTRNFNPGDINYE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3381 | - | - | 100% (277) | hypothetical protein Mvan_3381 |
M. vanbaalenii PYR-1 | Mvan_0060 | - | 4e-39 | 36.29% (259) | hypothetical protein Mvan_0060 |
M. vanbaalenii PYR-1 | Mvan_2000 | - | 1e-13 | 24.79% (242) | hypothetical protein Mvan_2000 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3143 | - | 1e-126 | 77.98% (277) | hypothetical protein Mflv_3143 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2154c | - | 4e-06 | 23.29% (249) | hypothetical protein MAB_2154c |
M. marinum M | MMAR_0390 | - | 2e-11 | 24.90% (249) | hypothetical protein MMAR_0390 |
M. avium 104 | MAV_3659 | - | 5e-35 | 35.23% (264) | hypothetical protein MAV_3659 |
M. smegmatis MC2 155 | MSMEG_3261 | - | 5e-90 | 62.98% (262) | hypothetical protein MSMEG_3261 |
M. thermoresistible (build 8) | TH_2489 | - | 7e-62 | 62.50% (184) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2342 | - | 1e-09 | 24.69% (239) | hypothetical protein MUL_2342 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_3381|M.vanbaalenii_PYR-1 MQQTTEPTA---AAHFVTAGGG-FTPTRYAQSHWGADHLNGPAVVGLVAR Mflv_3143|M.gilvum_PYR-GCK MQQSTDDPE---PAHFTVDGRG-FIPTKYAQSHWGSDHLNGPAVVGLAAR MSMEG_3261|M.smegmatis_MC2_155 MHVCDDAPMTEVVAHFTQSDADRFQPTRFAQSHWGEDHLNGPALVGLAAH TH_2489|M.thermoresistible__bu -------------------------------------------------- MAV_3659|M.avium_104 --MTIEDPAIMPEAFFTVDGDS-YIPGTMTRGPWGAAMG-GQIVGGLLGW MAB_2154c|M.abscessus_ATCC_199 -MTLDLTGCYYRRLD-ADGEFQVFESTELTASGWGPNLQHGSPPMALLLK MUL_2342|M.ulcerans_Agy99 -----MNGCYYRRLPGADGDYQMFDSTDFTRSNWDPDIQHGSPPLALLTK MMAR_0390|M.marinum_M -----MTDSYYELIDDADALGEKFAATDLVRGTWSASIQHGAPVSALLVR Mvan_3381|M.vanbaalenii_PYR-1 GLEKECGS-TEFHPTRLTVDLFRAARNAL-TTLEIRVVRDGRRVRSAECD Mflv_3143|M.gilvum_PYR-GCK GLEMECGS-ADLRPVRLTVDLFRAARNAP-TTLNIAVVRDGHRVRVAECE MSMEG_3261|M.smegmatis_MC2_155 ALENAFGL-PEFLPSRLTVDLFRAARGVE-TTTKVALVRDGRRVRNSECE TH_2489|M.thermoresistible__bu -------------------------------------VRDGHRVRSAECD MAV_3659|M.avium_104 GIEQSGID-PDLQPARFTVDLLRPALLAP-VQIRTSVQREGRRIKLVDAG MAB_2154c|M.abscessus_ATCC_199 AIEELPEPRENLRIGRVALDILGPVPLEP-VRVRAWIERPGRRIALAVAE MUL_2342|M.ulcerans_Agy99 LIEELSAG-SGLRIGRFSLDILGAIPVAP-VRARAWVQRPGSRVAMMVAE MMAR_0390|M.marinum_M ALQRCAWR-EDTRLSRVVVDLIGAVPADGDLWVSSRIERGGKQIELVSAE * * :: . Mvan_3381|M.vanbaalenii_PYR-1 VIQDE-----RVVARATLIQYRPSSAPPGDLWQSGATFPAHPD------P Mflv_3143|M.gilvum_PYR-GCK VVQDG-----RPVAKASLVQYRPSSPPPGELWEPGPVLAQPPD------P MSMEG_3261|M.smegmatis_MC2_155 LIQNG-----VTVARATLVQYRRSEAPRGDEWRPAPEFEPPAD------V TH_2489|M.thermoresistible__bu IIQEG-----RTVARASLLQYRRSAAPPGELWCPPREFEFPPQ------A MAV_3659|M.avium_104 LVQNG-----VVVARASALFLRRGDHPDGQVWSPPVQMPPLPTSSEGFPA MAB_2154c|M.abscessus_ATCC_199 MEARA-NGGYRAVARASAWLLATSVTADKASDR-FPPLPEYPAG----PT MUL_2342|M.ulcerans_Agy99 MVA------DRVLARVTAWLLAVSDTTDVASDR-YPPLVEGPAQ----PR MMAR_0390|M.marinum_M LAAPGPDGRPRAVARASGWRLAQLDTQELRHAAEQPPRPLAEAR----NR : :*:.: Mvan_3381|M.vanbaalenii_PYR-1 DGSVK--PFVGSDETGWTRSPAEHQNTSRKRFFNDGIA--VVAGEDNSPF Mflv_3143|M.gilvum_PYR-GCK DGSVP--PFVGSDDVGWTRSPAAHQNASRKRFYNDGIR--VVAGETNSPF MSMEG_3261|M.smegmatis_MC2_155 DTPADRTTYMGSDEGGWSRAIADHQNASRKRFINRTIT--VVEGQVNSPF TH_2489|M.thermoresistible__bu EQVR---AQIGSEAAGWHPTPGEHQNTSRKQYISRPIE--VIAGQRNSAF MAV_3659|M.avium_104 DMPFLIWGYGATRAGSPGIAAGEWEQAHSQKFAWTRLFRPMVHGHPLTPF MAB_2154c|M.abscessus_ATCC_199 PQAFGFEGSNYSKSVDFQWFTVPNGE-PQVAWMRPHVH--IVDTEPTTPW MUL_2342|M.ulcerans_Agy99 PAAFAGVGG-YFDALSWRPQDTEGQP-AAVSWFRPTAH--IVDTDPASPL MMAR_0390|M.marinum_M KLAPMSWDRNYVHSLDWRWLTEPMTPGPGECWIKPTVD--LVNGETMTPL . : :: . :. Mvan_3381|M.vanbaalenii_PYR-1 VRAAMVAEATS-LVTNLGTAGVGYINGDLTVALSRLPVDDWVGIQADSHH Mflv_3143|M.gilvum_PYR-GCK VRAAMVAEATS-LVTNLGTAGIGYINGDLTVALSRLPVDDWVGIQADSHH MSMEG_3261|M.smegmatis_MC2_155 VRTAMAAEGTS-LVTNLGTHGVGYINGDLTVALSRLPRDEWIGVQADSHW TH_2489|M.thermoresistible__bu IRAAMAAEATS-FVTNLGSRGVGYINGDLTVGLARLPVGETIGVQADSHV MAV_3659|M.avium_104 TRLAFVGDITS-SLTHWGTGGLRYINADYTVTASRLPDGEFLGLAAQSHY MAB_2154c|M.abscessus_ATCC_199 QRLASVIDSANGIGAVLNPLRFVYMNTDTVMHVHRIPQGDEFGVRARMSV MUL_2342|M.ulcerans_Agy99 QQLAAVVDCANGVGAILDPNRFLFMNTDTVVHLHRLPTGTDFALRARASV MMAR_0390|M.marinum_M ERLFAVADCANGIGSKLDITKWTFLNTDLAVHVFRIPAGDWIGIRAETSY : . : :. : . ::* * .: *:* . ..: * Mvan_3381|M.vanbaalenii_PYR-1 AAAGLAVGAATLFDSLGPFGTGLTTAIANPAAQIDFSTRNFNPGDINYE Mflv_3143|M.gilvum_PYR-GCK AADGLAVGTATLFDSRGPFGAGMTTAIANPAAQIDFSTRDFGLGNISYE MSMEG_3261|M.smegmatis_MC2_155 TSDGIAVGSATLFDRVGAFGTGLVTAVSNPAAQIDFANDPFPDRTAPR- TH_2489|M.thermoresistible__bu AQDGVAVGTAALFDSAGLFGSGLTTAVSNPAAQIEFSGPGLADVR---- MAV_3659|M.avium_104 GTAGVAAGAATLFDRHGPLGTSSALALAQPADAFQPAYT---------- MAB_2154c|M.abscessus_ATCC_199 GPDGVGVTTAEIFDRQGHIGSSAQTVLVQRR------------------ MUL_2342|M.ulcerans_Agy99 GPDGLGVTTAEIFDTTGFVGTSAQTLLVRRR------------------ MMAR_0390|M.marinum_M GPDGIGTAAGTLFDQQGAVGTIAQSVLVRRRAR---------------- *:.. :. :** * .*: : .