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SVLVGFGPCFEQGLSVLCEQCAGGEWGSARTAGTIPGGPISTETRVNERIRVPEVRLIGPGGEQVGIVRI EDALRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKIDPHDYET KKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVAEYGFIETSAKQDGRNMTMVLAPHRGA KTRAKAAHDADTPAGQRGDAQAADAPTDTPKN*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_3328 | - | - | 100% (243) | translation initiation factor IF-3 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1668 | infC | 2e-95 | 87.50% (200) | translation initiation factor IF-3 |
| M. gilvum PYR-GCK | Mflv_3542 | - | 7e-95 | 96.57% (175) | initiation factor 3 |
| M. tuberculosis H37Rv | Rv1641 | infC | 2e-95 | 87.50% (200) | translation initiation factor IF-3 |
| M. leprae Br4923 | MLBr_01394 | infC | 3e-85 | 85.25% (183) | translation initiation factor IF-3 |
| M. abscessus ATCC 19977 | MAB_2321 | - | 2e-83 | 87.93% (174) | translation initiation factor IF-3 (InfC) |
| M. marinum M | MMAR_2448 | infC | 2e-79 | 89.51% (162) | initiation factor IF-3 InfC |
| M. avium 104 | MAV_3127 | infC | 8e-81 | 87.13% (171) | translation initiation factor IF-3 |
| M. smegmatis MC2 155 | MSMEG_3793 | infC | 1e-100 | 91.37% (197) | translation initiation factor IF-3 |
| M. thermoresistible (build 8) | TH_1585 | infC | 1e-79 | 89.94% (159) | PROBABLE INITIATION FACTOR IF-3 INFC |
| M. ulcerans Agy99 | MUL_1627 | infC | 6e-86 | 90.17% (173) | initiation factor IF-3 InfC |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_2448|M.marinum_M --------------------------------------------------
MUL_1627|M.ulcerans_Agy99 --------------------------------------------------
MLBr_01394|M.leprae_Br4923 --------------------------------------------------
Mb1668|M.bovis_AF2122/97 ----------------------------------------MSTETRVNER
Rv1641|M.tuberculosis_H37Rv ----------------------------------------MSTETRVNER
MAV_3127|M.avium_104 --------------------------------------------------
MSMEG_3793|M.smegmatis_MC2_155 ----------------------------MGLLVRPNIGGPISTETRVNER
TH_1585|M.thermoresistible__bu --------------------------------------------------
Mvan_3328|M.vanbaalenii_PYR-1 MSVLVGFGPCFEQGLSVLCEQCAGGEWGSARTAGTIPGGPISTETRVNER
Mflv_3542|M.gilvum_PYR-GCK --------------------------------------------------
MAB_2321|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_2448|M.marinum_M ------------------MRIEDALRVAADADLDLVEVAPNARPPVCKIM
MUL_1627|M.ulcerans_Agy99 -------MIGPGGEQVGIVRIEDALRVAADADLDLVEVAPNARPPVCKIM
MLBr_01394|M.leprae_Br4923 -------MIGPGGEQVGIVRIEDALRVAADADLDLVEVAPNARPPVCKIM
Mb1668|M.bovis_AF2122/97 IRVPEVRLIGPGGEQVGIVRIEDALRVAADADLDLVEVAPNARPPVCKIM
Rv1641|M.tuberculosis_H37Rv IRVPEVRLIGPGGEQVGIVRIEDALRVAADADLDLVEVAPNARPPVCKIM
MAV_3127|M.avium_104 ------------------MRIEDALRVAADADLDLVEVAPNARPPVCKIM
MSMEG_3793|M.smegmatis_MC2_155 IRVPEVRLIGPGGEQVGIVRIEDALRVAADADLDLVEVAPNARPPVCKIM
TH_1585|M.thermoresistible__bu ------------------VRIEDALRVAAEADLDLVEVAPNARPPVCKIM
Mvan_3328|M.vanbaalenii_PYR-1 IRVPEVRLIGPGGEQVGIVRIEDALRVAADADLDLVEVAPDAKPPVCKIM
Mflv_3542|M.gilvum_PYR-GCK ------------------MRIEDALRVAADADLDLVEVAPDAKPPVCKIM
MAB_2321|M.abscessus_ATCC_1997 ------------------MRIEDALRVAADADLDLVEVAPDARPPVCKIM
:**********:**********:*:*******
MMAR_2448|M.marinum_M DYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKIDDHDYETKKGHVIRFL
MUL_1627|M.ulcerans_Agy99 DYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKIDDHDYETKKGHVIRFL
MLBr_01394|M.leprae_Br4923 DYGKYKYEVAQKARESRRNQQQTVVKEQKLRPKIDDHDYETKKSHVVRFL
Mb1668|M.bovis_AF2122/97 DYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKIDDHDYETKKGHVVRFL
Rv1641|M.tuberculosis_H37Rv DYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKIDDHDYETKKGHVVRFL
MAV_3127|M.avium_104 DYGKFKYEAAQKARESRRNQQQTVVKEQKLRPKIDDHDYETKKGHVIRFL
MSMEG_3793|M.smegmatis_MC2_155 DYGKYKYETAQKARESRKNQQQTVVKEQKLRPKIDDHDYETKKGHVIRFL
TH_1585|M.thermoresistible__bu DYGKYKYETAQKARESRKNQQQTVVKEQKLRPKIDPHDYETKKGHVIRFL
Mvan_3328|M.vanbaalenii_PYR-1 DYGKFKYETAQKARESRKNQQQTVVKEQKLRPKIDPHDYETKKGHVIRFL
Mflv_3542|M.gilvum_PYR-GCK DYGKFKYETAQKARESRKNQQQTVVKEQKLRPKIDPHDYETKKGHVIRFL
MAB_2321|M.abscessus_ATCC_1997 DYGKFKYETAQKARESRKNQQQTVVKEQKLRPKIDDHDYETKKGHVVRFL
****:***.********:***************** *******.**:***
MMAR_2448|M.marinum_M EAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSAKQDGRN
MUL_1627|M.ulcerans_Agy99 EAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSAKQDGRN
MLBr_01394|M.leprae_Br4923 EAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFVETSAKQDGRN
Mb1668|M.bovis_AF2122/97 EAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSAKQDGRN
Rv1641|M.tuberculosis_H37Rv EAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSAKQDGRN
MAV_3127|M.avium_104 EAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSAKQDGRN
MSMEG_3793|M.smegmatis_MC2_155 EAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSAKQDGRN
TH_1585|M.thermoresistible__bu EAGSKVKVTIMFRGREQSRPELGYRLLQRLGNDVAEYGYIETAPKQDGRN
Mvan_3328|M.vanbaalenii_PYR-1 EAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVAEYGFIETSAKQDGRN
Mflv_3542|M.gilvum_PYR-GCK EAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADYGFVETSAKQDGRN
MAB_2321|M.abscessus_ATCC_1997 EAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFVETSAKQDGRN
***********************:******* ***:**::**:.******
MMAR_2448|M.marinum_M MTMVLAPHRGAKTRARARHPDDPAA-------HSADGDNQPN--
MUL_1627|M.ulcerans_Agy99 MTMVLAPHRGAKTRARARHPDDPAT-------HSADGDNQPN--
MLBr_01394|M.leprae_Br4923 MTMVLAPHRGAKTRASARHPEVPGAGSVQDIDATGDTDGSPH--
Mb1668|M.bovis_AF2122/97 MTMVLAPHRGAKTRARARHPGEPAGGPPPK-PTAGDSKAAPN--
Rv1641|M.tuberculosis_H37Rv MTMVLAPHRGAKTRARARHPGEPAGGPPPK-PTAGDSKAAPN--
MAV_3127|M.avium_104 MTMVLAPHRGAKTRARARHPEGPGGAASDS-DAAADAEPSSS--
MSMEG_3793|M.smegmatis_MC2_155 MTMVLAPHRGAKTRAKAAEQAERPGG------PAPDEDAS----
TH_1585|M.thermoresistible__bu MTMVLAPHRGAKTRAKAAQEAERSGG------KA----------
Mvan_3328|M.vanbaalenii_PYR-1 MTMVLAPHRGAKTRAKAAHDADTPAGQRGDAQAADAPTDTPKN-
Mflv_3542|M.gilvum_PYR-GCK MTMVLAPHRGAKTRAKAAHDADAPAAQRGTAQAADAPTDTPQN-
MAB_2321|M.abscessus_ATCC_1997 MTMVLAPHRGAKTRAKAAQQAEAPAGPATASAAAPAEQAPTEQT
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