For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTDVPEGLGEGFDKELGLTYLEMTPDGGRAQLEITEKLLQPWGIVHGGVYCAVIESLASVSGHVWLSQNG GGTVVGVNNNTDFLRAIRSGTVTATSSPIHRGRRQQLWLITITDEADRVVARGQVRLQNITDA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3085 | - | - | 100% (134) | hypothetical protein Mvan_3085 |
M. vanbaalenii PYR-1 | Mvan_0316 | - | 6e-05 | 26.67% (120) | hypothetical protein Mvan_0316 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1878 | - | 7e-45 | 68.33% (120) | hypothetical protein Mb1878 |
M. gilvum PYR-GCK | Mflv_3355 | - | 3e-67 | 89.39% (132) | thioesterase superfamily protein |
M. tuberculosis H37Rv | Rv1847 | - | 2e-44 | 67.50% (120) | hypothetical protein Rv1847 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2418 | - | 4e-43 | 63.70% (135) | putative phenylacetic acid degradation-related protein |
M. marinum M | MMAR_2721 | - | 5e-46 | 64.57% (127) | hypothetical protein MMAR_2721 |
M. avium 104 | MAV_2868 | - | 8e-48 | 66.14% (127) | hypothetical protein MAV_2868 |
M. smegmatis MC2 155 | MSMEG_3628 | - | 7e-59 | 80.31% (127) | ComA operon protein 2 |
M. thermoresistible (build 8) | TH_1062 | - | 4e-58 | 76.87% (134) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_3032 | - | 5e-45 | 63.78% (127) | hypothetical protein MUL_3032 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_3085|M.vanbaalenii_PYR-1 MTTDVPEG----LGEG----FDKELGLTYLEMTPDGGRAQLEITEKLLQP Mflv_3355|M.gilvum_PYR-GCK -MSEVPDG----LGDG----FDKELGLTYLEMSPDGGRAQLEITEKLLQP TH_1062|M.thermoresistible__bu MTSDVPAD----LGRG----FDQVIGLTYLEATPDGARAQLEITEKVLQP MSMEG_3628|M.smegmatis_MC2_155 ----MNAG----IGKG----FDSEIGLNYTELGPDGGRAELKITEKLLQP MAB_2418|M.abscessus_ATCC_1997 -MSDTPEQ----FSKMPTAPFDRLVGLEYTSLTPDGVTASLAITENLLQP Mb1878|M.bovis_AF2122/97 MQPSPDSP----APLNVTVPFDSELGLQFTELGPDGARAQLDVRPKLLQL Rv1847|M.tuberculosis_H37Rv MQPSPDSP----APLNVTVPFDSELGLQFTELGPDGARAQLDVRPKLLQL MMAR_2721|M.marinum_M MPSSPEADPAVAIPPTVSAPFDVELGLEFTELTADGARAQLEVKPKHLQP MUL_3032|M.ulcerans_Agy99 MPSSPEADPAVAIPPTVSPPFDVELGLEFTELTADGARAQLEVKPKHLQP MAV_2868|M.avium_104 MSEPQEAI----IPPDFSAPFDREIGLQFTELSPDGARARLEVTPKLLQP ** :** : . .** * * : : ** Mvan_3085|M.vanbaalenii_PYR-1 WGIVHGGVYCAVIESLASVSGHVWLS-QNG-GGTVVGVNNNTDFLRAIRS Mflv_3355|M.gilvum_PYR-GCK WGIVHGGVYCAVIESMASVSAHVWLG-QNG-GGTVVGVNNNTDFLRAIRS TH_1062|M.thermoresistible__bu WGIVHGGVYCAVIESMASVSGHLWFN-SHGEGGTVVGVNNNTDFLRALRS MSMEG_3628|M.smegmatis_MC2_155 WGIVHGGVYCSIVESLASVSGHIWLS-ENG-GGTVVGVNNNTDFLRAIGS MAB_2418|M.abscessus_ATCC_1997 HGIVHGGVYCSVVESVASVSAFVWRANVLGEESAVVGVNNNTDFLRAIST Mb1878|M.bovis_AF2122/97 TGVVHGGVYCAMIESIASMAAFAWLN-SHGEGGSVVGVNNNTDFLRSISS Rv1847|M.tuberculosis_H37Rv TGVVHGGVYCAMIESIASMAAFAWLN-SHGEGGSVVGVNNNTDFVRSISS MMAR_2721|M.marinum_M MGLVHGGVYCSMVESMASMAAFTWLS-TRG-GGGVVGVNNSTDFLRAISS MUL_3032|M.ulcerans_Agy99 MGLVHGGVYCSMVESMASMAAFTWLS-TRG-GGGVVGVNNSTDFLRAISS MAV_2868|M.avium_104 MGLVHGGVYCSMIESMASVAAYTWLA-TRG-GGNVVGVNNNTDFLRSIGS *:*******:::**:**::.. * * . ******.***:*:: : Mvan_3085|M.vanbaalenii_PYR-1 GTVTATSSPIHRGRRQQLWLITITDEADRVVARGQVRLQNITDA---- Mflv_3355|M.gilvum_PYR-GCK GTVTATSTPIHRGRRQQLWLITITDEAGKTVARGQVRLQNLPDA---- TH_1062|M.thermoresistible__bu GTVTAESTPIHRGRRQQLWQVSISDQDGRLVARGQVRLQNISE----- MSMEG_3628|M.smegmatis_MC2_155 GTVTAVSTPIHRGRRQQLWLITLTDEDGRTVARGQVRLQNMPAES--- MAB_2418|M.abscessus_ATCC_1997 GTLTAASTPIHRGRRQQLWLVTITDDQNRTVARGQVRLQNL------- Mb1878|M.bovis_AF2122/97 GMVYGTAEPLHRGRRQQLWLVTITDDTDRVVARGQVRLQNLEARP--- Rv1847|M.tuberculosis_H37Rv GMVYGTAEPLHRGRRQQLWLVTITDDTDRVVARGQVRLQNLEARP--- MMAR_2721|M.marinum_M GTVYGTAEPLHRGRRQQLWLVVITDDADHVIARGQVRLQNLEAPPSDG MUL_3032|M.ulcerans_Agy99 GTVYGTAELLHRGRRQQLWLVVITDDADHVIARGQVRLQNLEAPPSDG MAV_2868|M.avium_104 GTVYGVVEPIHRGRSQQLWLVTITDDDDRVVARGQVRLQNLEVRNA-- * : . :**** **** : ::*: .: :*********: