For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTRALAVGYGAACYLLFLAVFLYAIGFVGDVVVPRSVDHAVDAPLGQALIVNLSLLTLFAVQHSVMARPA FKRWWTRYIPPPVERSTYVLLASLALALLFWQWRKIPFVVWDVTYQPLRVAVWALFWLGWAIVLAATFMI NHFELFGLRQVIANWRAQPDAETGFRATMFYRVVRHPLMLGFLIAFWSAPTMTAGHLLFATATTGYILIA LQLEERDLLATLGARYAAYRQTVPMLVPRPRTRRRARRLEGRVDTASYAPRR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_2947 | - | - | 100% (262) | putative integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3266c | - | 2e-97 | 68.75% (240) | integral membrane protein |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv3238c | - | 2e-97 | 68.75% (240) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1307 | - | 4e-94 | 64.58% (240) | hypothetical protein MMAR_1307 |
| M. avium 104 | MAV_4200 | - | 1e-91 | 63.11% (244) | hypothetical protein MAV_4200 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2574 | - | 3e-90 | 63.40% (235) | hypothetical protein MUL_2574 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1307|M.marinum_M ------------MKRYLIIGYGAAGYLLFLVATLYAIGFVGAIVVPRNID
MUL_2574|M.ulcerans_Agy99 ------------MKRYLIIGYGAAGYLLFLVATLYAIGFVGAIVVPRNID
MAV_4200|M.avium_104 MFPAADRVHNQLMKRYLVVGYGAAAYLLFLGAFLYLVAFLGNFWVPRTVD
Mb3266c|M.bovis_AF2122/97 ------------MKRYLTIIYGAASYLVFLVAFGYAIGFVGDVVVPRTVD
Rv3238c|M.tuberculosis_H37Rv ------------MKRYLTIIYGAASYLVFLVAFGYAIGFVGDVVVPRTVD
Mvan_2947|M.vanbaalenii_PYR-1 ------------MTRALAVGYGAACYLLFLAVFLYAIGFVGDVVVPRSVD
*.* * : **** **:** . * :.*:* . ***.:*
MMAR_1307|M.marinum_M HGIDGPIWLAVLVNVALLGLFGIQHSVMARPGFKRWWTRFVPKTVERSTY
MUL_2574|M.ulcerans_Agy99 HGIDGPIWLAVLVNVALLGLFGIQHSVMARPGFKRWWTRFVPKTVERSTY
MAV_4200|M.avium_104 HGLSSPIGEAVVVNLVLLGLFGVQHSVMARPGFKAWWTRLVPATIERSTY
Mb3266c|M.bovis_AF2122/97 HAIAAPIGQAVVVNLVLLGVFAVQHSVMARQGFKRWWTRFVPPSIERSTY
Rv3238c|M.tuberculosis_H37Rv HAIAAPIGQAVVVNLVLLGVFAVQHSVMARQGFKRWWTRFVPPSIERSTY
Mvan_2947|M.vanbaalenii_PYR-1 HAVDAPLGQALIVNLSLLTLFAVQHSVMARPAFKRWWTRYIPPPVERSTY
*.: .*: *::**: ** :*.:******* .** **** :* .:*****
MMAR_1307|M.marinum_M VLLASAILLLLFWQWRTMPAVIWDVQYPPARVVLWGLFGLGWVVVFASSF
MUL_2574|M.ulcerans_Agy99 VLLASAILLLLFLQWRTMPAVIWDVQYPPARVVLWGLFGLGWVVVFASSF
MAV_4200|M.avium_104 VVLSSAVLVLLYWQWRTMPAVIWEVTAPAGRLVLWTLFWLGWVIALAATF
Mb3266c|M.bovis_AF2122/97 VLLASVALLLLYWQWRTMPAVIWDVRQPAGRVALWALFWLGWATVLTSTF
Rv3238c|M.tuberculosis_H37Rv VLLASVALLLLYWQWRTMPAVIWDVRQPAGRVALWALFWLGWATVLTSTF
Mvan_2947|M.vanbaalenii_PYR-1 VLLASLALALLFWQWRKIPFVVWDVTYQPLRVAVWALFWLGWAIVLAATF
*:*:* * **: ***.:* *:*:* . *:.:* ** ***. .::::*
MMAR_1307|M.marinum_M MVSHFDLLGLRQVYLAWREKPYTEINFRVNFFYRVVRHPLMLGFIIAFWA
MUL_2574|M.ulcerans_Agy99 MVSHFDLLGLRQVYLAWREKPYTEINFRVNFYYRVVRHPLMLGFIIAFWA
MAV_4200|M.avium_104 MVSHFDLFGLRQVYLAWRGKPYSHIGFHARMLYRMVRHPLMLGFVIAFWA
Mb3266c|M.bovis_AF2122/97 MINHFELFGLRQVYLAWRGKPYTEIGFQAHLLYRWVRHPIMLGFVVAFWA
Rv3238c|M.tuberculosis_H37Rv MINHFELFGLRQVYLAWRGKPYTEIGFQAHLLYRWVRHPIMLGFVVAFWA
Mvan_2947|M.vanbaalenii_PYR-1 MINHFELFGLRQVIANWRAQPDAETGFRATMFYRVVRHPLMLGFLIAFWS
*:.**:*:***** ** :* :. .*:. : ** ****:****::***:
MMAR_1307|M.marinum_M TPTMTAGHLLFAIVTTAYVLVALPLEERDLVAALGDQYRDYQRSVPMLLP
MUL_2574|M.ulcerans_Agy99 TPTMTAGHLLFAIVTTAYVLVALPLEERDLVAALGDQYRDYQRSVPLGTD
MAV_4200|M.avium_104 APTMTAGHLLFSIAMTGYILLAVHLEEHDLVQALGDQYRDYRHRVPMLVP
Mb3266c|M.bovis_AF2122/97 TPMMTAGHLLFAIGATGYILVALQFEERDLLAALGDQYRDYRREVSMLLP
Rv3238c|M.tuberculosis_H37Rv TPMMTAGHLLFAIGATGYILVALQFEERDLLAALGDQYRDYRREVSMLLP
Mvan_2947|M.vanbaalenii_PYR-1 APTMTAGHLLFATATTGYILIALQLEERDLLATLGARYAAYRQTVPMLVP
:* ********: *.*:*:*: :**:**: :** :* *:: *.:
MMAR_1307|M.marinum_M VPHR--------GSGKTVGQH---
MUL_2574|M.ulcerans_Agy99 VAA---------GTAPRLG-----
MAV_4200|M.avium_104 LGHRPR-----RHPTQPAGLP---
Mb3266c|M.bovis_AF2122/97 WPHR--------HT----------
Rv3238c|M.tuberculosis_H37Rv WPHR--------HT----------
Mvan_2947|M.vanbaalenii_PYR-1 RPRTRRRARRLEGRVDTASYAPRR