For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GTGQQPGEHGCRLRSPPPETNHHDLLCMVMHPCERVGLDFVDTAPYRFVSTVDLAITPEQLFEVLADETS WPHWASVITKVTWTSPEPRGVGTTRTVDMRGGITGAEEFLAWEPFTRMAFRFNESSTGSISAFAEDYHVV PTAGGCHLTWIMALKPNGPAGRFGLAAGKPVMGWLFQRFLHNLRRYTDERFATR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2614 | - | - | 100% (195) | hypothetical protein Mvan_2614 |
M. vanbaalenii PYR-1 | Mvan_2251 | - | 3e-18 | 37.60% (125) | hypothetical protein Mvan_2251 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2604 | - | 7e-62 | 68.71% (163) | hypothetical protein Mb2604 |
M. gilvum PYR-GCK | Mflv_3786 | - | 8e-79 | 83.33% (162) | hypothetical protein Mflv_3786 |
M. tuberculosis H37Rv | Rv2574 | - | 7e-62 | 68.71% (163) | hypothetical protein Rv2574 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3139c | - | 4e-12 | 39.33% (89) | hypothetical protein MAB_3139c |
M. marinum M | MMAR_2156 | - | 2e-55 | 63.25% (166) | hypothetical protein MMAR_2156 |
M. avium 104 | MAV_3449 | - | 7e-61 | 67.88% (165) | hypothetical protein MAV_3449 |
M. smegmatis MC2 155 | MSMEG_3001 | - | 7e-72 | 73.91% (161) | hypothetical protein MSMEG_3001 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1741 | - | 5e-55 | 62.05% (166) | hypothetical protein MUL_1741 |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_2614|M.vanbaalenii_PYR-1 MGTGQQPGEHGCRLRSPPPETNHHDLLCMVMHPCERVGLDFVDT----AP Mflv_3786|M.gilvum_PYR-GCK ------------------------------MHSCERVGLDFIDS----AP MSMEG_3001|M.smegmatis_MC2_155 ---------------------------MARTYECERVDLDFIDR----AP Mb2604|M.bovis_AF2122/97 ------------------------------MYPCERVGLSFTET----AP Rv2574|M.tuberculosis_H37Rv ------------------------------MYPCERVGLSFTET----AP MAV_3449|M.avium_104 ------------------------------MFDCERVGLDFIDS----AP MMAR_2156|M.marinum_M ------------------------------MFPCERVDLSFVDPDSGQAP MUL_1741|M.ulcerans_Agy99 ------------------------------MFPCERVDLSFVDPDSGQAP MAB_3139c|M.abscessus_ATCC_199 -----------------------------MVMPSFKLEP-LVESDFNTSD . :: : : : Mvan_2614|M.vanbaalenii_PYR-1 YRFVSTVDLAITPEQLFEVLADETSWPHWASVITKVTWTSPEPRGVGTTR Mflv_3786|M.gilvum_PYR-GCK YRFVSTVDLAITPEQLFEVLADETSWPHWATVITDVTWTTPEPRGVGTTR MSMEG_3001|M.smegmatis_MC2_155 FRFVSTVDLPITGEQLFEVLADETSWPKWATVITDVEWTSPQPRGVGTTR Mb2604|M.bovis_AF2122/97 YLFRNTVDLAITPEQLFEVLADPQAWPRWATVITKVTWTSPEPFGAGTTR Rv2574|M.tuberculosis_H37Rv YLFRNTVDLAITPEQLFEVLADPQAWPRWATVITKVTWTSPEPFGAGTTR MAV_3449|M.avium_104 VVFRNSVDLAITPEQLFEVLSDAAAWPRWATVITKVTWTSPEPRGVGTTR MMAR_2156|M.marinum_M FLYRNSVDLAITPEQLFEVLSDAESWPSWAPVITKVTWTSPPPFRVGTTR MUL_1741|M.ulcerans_Agy99 FLYRNSVDLAITPEQLFEVLSDAESWPSWAPVITKVTWTSPPPFRIGTTR MAB_3139c|M.abscessus_ATCC_199 FVYTFSTPLPKDAATVWAELNGESPL-HWCKAINQIGWTSPEPRGVGSTR : :. *. :: * . . *. .*..: **:* * *:** Mvan_2614|M.vanbaalenii_PYR-1 TVDMRG-GITGAEEFLAWEPFT---RMAFRFNESSTGSISAFAEDYHVVP Mflv_3786|M.gilvum_PYR-GCK TVQMRG-GITGDEVFLAWEPFS---RMAFRFNAASTRSISAFAEDYRVVP MSMEG_3001|M.smegmatis_MC2_155 TVHMRG-NIVGHEEFLAWEPFS---RMAFRFNTTTSGAISAFAEDYRVVE Mb2604|M.bovis_AF2122/97 IVEMRG-GIVGDEEFISWEPFT---RMAFRFNECSTRAVGAFAEDYRVQA Rv2574|M.tuberculosis_H37Rv IVEMRG-GIVGDEEFISWEPFT---RMAFRFNECSTRAVGAFAEDYRVQA MAV_3449|M.avium_104 VVEMRG-GIVGNEEFLAWEPFT---HMAFRFNECSTRSVAAFAEDYRVQV MMAR_2156|M.marinum_M TVEMRG-GLVGNEEFIAWEPFS---HMAFRFNECSTQAVAAFAEDYRVEV MUL_1741|M.ulcerans_Agy99 TVEMRG-GLVGNEEFIAWEPFS---HMAFRFNECSTQAVAAFAEDYRVEA MAB_3139c|M.abscessus_ATCC_199 TAKLALPGAAVNERFIVWEESPERYRNAFTVETATFPGTKRFGELYEVVG ..: . . * *: ** . : ** .: : . *.* *.* Mvan_2614|M.vanbaalenii_PYR-1 TAGGCHLTWIMALKPNGPAGRFGLAAGKPVMGWLFQRFLHNLRRYTDERF Mflv_3786|M.gilvum_PYR-GCK TQNGCHLTWIMALQPNGVAGRAGLFLGRPVMARMFQKFLHNLRDYTDERF MSMEG_3001|M.smegmatis_MC2_155 TPQGCHLTWVMAIRPSGPAGRLGMLLGRPLMAWMFQRFLHNLRRYSDARY Mb2604|M.bovis_AF2122/97 IPGGCRLTWTMAQKLAGPA-RPALFVFRPLLNLALRRFLRNLRRYTDARF Rv2574|M.tuberculosis_H37Rv IPGGCRLTWTMAQKLAGPA-RPALFVFRPLLNLALRRFLRNLRRYTDARF MAV_3449|M.avium_104 IPGGCRLTWTMAQKPAGPA-KLAMAVVGPLLNLALRRFLRNLRSYTDS-- MMAR_2156|M.marinum_M IPGGCRLTWTMAQKPAGPA-RLGMMLFGPLLNLGLRRFLRKLRSYTDARF MUL_1741|M.ulcerans_Agy99 IPGGCRLTWTMAQKPAGPA-RLGMMLFGPLLNLGLRHFLRKLRSYTDARF MAB_3139c|M.abscessus_ATCC_199 TATGSLFTWSFFIEP--------SLGFTRHLKPVIRRGLSGLITDTQKHF *. :** : . : ::: * * :: Mvan_2614|M.vanbaalenii_PYR-1 ATR--- Mflv_3786|M.gilvum_PYR-GCK GG---- MSMEG_3001|M.smegmatis_MC2_155 PSARSA Mb2604|M.bovis_AF2122/97 AAAQQS Rv2574|M.tuberculosis_H37Rv AAAQQS MAV_3449|M.avium_104 LATRQP MMAR_2156|M.marinum_M EVPQQR MUL_1741|M.ulcerans_Agy99 EVPQQR MAB_3139c|M.abscessus_ATCC_199 A-----