For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGLTLAERRAVTQAAAMRYQQAGKRGKTRILDELCANTGWHRSHARKALTAALAPTLVAVRAPRPVTYGP EVIAALTVCWTVLGMPAGKRLAPMLTELVAVLRHFRELVISDETAALLVSMSAATIDRRLADERARCKIR GRVGTKPGSLLKSQIPVRTWAEWDDAVPGFVEIDTVFHDGGSRGGGHAFTLTVTDIATGWTENRSLPDRT AKHVLAALNHIAAAMPFPILGVDSDNGSEFINDDLLRWCQKRRITFTRSRPGNKNDGCHVEQKNWAVVRT VVSYYRYDTAPELLLLNEIWKLQSMLTNYFHPQQKLISKVRTGAKVSRKHDKATTPFHRAIDHPSMTVDR IVALKRTYSLINPAATQRQIQALTTQLFTLATSKAQAGLPAPVTKRARSREATNHPSRAS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2415 | - | - | 100% (410) | integrase catalytic subunit |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2830 | - | 3e-60 | 39.83% (359) | hypothetical protein Mb2830 |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2807 | - | 1e-59 | 39.55% (359) | hypothetical protein Rv2807 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_3458 | - | 6e-22 | 67.61% (71) | transposase, putative |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_2415|M.vanbaalenii_PYR-1 ---------MGLTLAERRAVTQAAAMRYQQAG-KRGKTR--------ILD MAV_3458|M.avium_104 MEMRAYAQWMGLTLAQRRAITEAAATRYQQAS-KRGKGR--------ILD Mb2830|M.bovis_AF2122/97 ---MVSTTGMGRSTARRMLTGPGLPEPAEQVDGRRLRARGFSDDARALLE Rv2807|M.tuberculosis_H37Rv ---MVSTTGMGRSTARRMLTGPGLPEPAEQVDGRRLRARGFSDDARALLE ** : *.* . . :*.. :* : * :*: Mvan_2415|M.vanbaalenii_PYR-1 ELCANTGWHRSHARKALTAALAPTLVAVRAPRPVTYGPEVIAALTVCWTV MAV_3458|M.avium_104 EVCANTGWHRNHARKAFKAALQP--KSIQEPQPTQEGQE----------- Mb2830|M.bovis_AF2122/97 HVWALMGMPCGKYLVVMLELWLPLVAAAGDLDKPFATEAAVAELKAMS-- Rv2807|M.tuberculosis_H37Rv HVWALMGMPCGKYLVVMLELWLPLEAAAGDLDKPFATEAAVAELKAMS-- .: * * .: .: * : Mvan_2415|M.vanbaalenii_PYR-1 LGMPAGKRLAPMLTELVAVLRHFRELVISDETAALLVSMSAATIDRRLAD MAV_3458|M.avium_104 ----------------------------------------AGVVSLRLTS Mb2830|M.bovis_AF2122/97 ----------------------------------------AATVDRYLKP Rv2807|M.tuberculosis_H37Rv ----------------------------------------AATVDRYLKP *..:. * Mvan_2415|M.vanbaalenii_PYR-1 ERARCKIRGRVGTKPGSLLKSQIPVRTWAEWDDAVPGFVEIDTVFHDGGS MAV_3458|M.avium_104 DYER-------------LLYVVLPA-------------------FH---- Mb2830|M.bovis_AF2122/97 ARERMRIKGISTTKPSPLLRNSITIHTCSDEAPKVPGVIEADTVAHCGPS Rv2807|M.tuberculosis_H37Rv ARERMRIKGISTTKPSPLLRNSITIHTCSDEAPKVPGVIEADTVAHCGPS * ** :. * Mvan_2415|M.vanbaalenii_PYR-1 RGGGHAFTLTVTDIATGWTENRSLPDRTAKHVLAALNHIAAAMPFPILGV MAV_3458|M.avium_104 -------------------------------------------------- Mb2830|M.bovis_AF2122/97 LIGEFARTLTMTDLVTGWTENASIRNNAAKWILEGIKECQQRFPFPMTVF Rv2807|M.tuberculosis_H37Rv LIGEFARTLTMTDLVTGWTENASIRNNAAKWILEGIKECQQRFPFPMTVF Mvan_2415|M.vanbaalenii_PYR-1 DSDNGSEFINDDLLRWCQKRRITFTRSRPGNKNDGCHVEQKNWAVVRTVV MAV_3458|M.avium_104 -------------------------------------------------- Mb2830|M.bovis_AF2122/97 DSDCGGEFINHDVAGWLQARDIAQTRSRPYQKNDQAHVESKNNHVVRKHA Rv2807|M.tuberculosis_H37Rv DSDCGGEFINHDVAGWLQARDIAQTRSRPYQKNDQAHVESKNNHVVRKHA Mvan_2415|M.vanbaalenii_PYR-1 SYYRYDTAPELLLLNEIWKLQSMLTNYFHPQQKLI-SKVRTGAKVSRKHD MAV_3458|M.avium_104 ------------LMTDVLKLFDQLS------------------------- Mb2830|M.bovis_AF2122/97 FYWRYDTGEELELLNRLWPLVSLRCNFFTPTKKPVGYTSTVNGRRKRIYD Rv2807|M.tuberculosis_H37Rv FYWRYDTGEELELLNRLWPLVSLRCNFFTPTKKPVGYTSTVNGRRKRIYD *:. : * . Mvan_2415|M.vanbaalenii_PYR-1 KATTPFHRAIDHPSMTVDRIVALKRTYSLINPAATQRQIQALTTQLFTLA MAV_3458|M.avium_104 KTPT---------------------------------------------- Mb2830|M.bovis_AF2122/97 KPATPWQRLQASGVLDAQQLSTVAARIEGFNPADLTRQINAIQMQLLDLA Rv2807|M.tuberculosis_H37Rv KPATPWQRLQASGVLDAQQLSTVAARIEGFNPADLTRQINAIQMQLLDLA *..* Mvan_2415|M.vanbaalenii_PYR-1 TSKAQAGLPAPVTKRARSREATNHPSRAS MAV_3458|M.avium_104 ----------------------------- Mb2830|M.bovis_AF2122/97 KTKTEALATARHIDLQSLQPSINRLAKAK Rv2807|M.tuberculosis_H37Rv KTKTEALATARHIDLQSLQPSINRLAKAK