For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRGGQQGQERRAPVLRDEWREPLRAQRDPLAEHPGRVRSNREDHKRWRKQTWIGRFVSTYGWRAYALPLL VALTAVVIFQTITGTSAPQAVEDEGPVQGPPTIGVPSTAIVGAPPKGLTQFDANLPTGILPAGGPFTEAG ARTWRVVPGSAPQVGQGTTKVFTYSVEIEDGIDTTTFGGDDGFARMVSETLANPKSWTHNPQFAFTRVDA ASGVTPDFRVSLTSPMTIRDGCGYDIQLEASCYNPAFEGQPRVFINEARWVRGAVPFQGDIGSYRQYLIN HEVGHAIGYQRHEQCTANGELAPIMMQQTFSTNNNDAAKFDPGTVTPDGLTCRFNPWPYPIA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1796 | - | - | 100% (342) | hypothetical protein Mvan_1796 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3232c | - | 1e-119 | 68.75% (288) | hypothetical protein Mb3232c |
| M. gilvum PYR-GCK | Mflv_4671 | - | 0.0 | 91.27% (332) | hypothetical protein Mflv_4671 |
| M. tuberculosis H37Rv | Rv3207c | - | 1e-120 | 69.10% (288) | hypothetical protein Rv3207c |
| M. leprae Br4923 | MLBr_00816 | - | 1e-140 | 67.45% (341) | hypothetical protein MLBr_00816 |
| M. abscessus ATCC 19977 | MAB_3526c | - | 1e-136 | 67.86% (336) | hypothetical protein MAB_3526c |
| M. marinum M | MMAR_1351 | - | 1e-136 | 65.87% (334) | hypothetical protein MMAR_1351 |
| M. avium 104 | MAV_4154 | - | 1e-147 | 70.96% (334) | hypothetical protein MAV_4154 |
| M. smegmatis MC2 155 | MSMEG_1936 | - | 1e-165 | 81.02% (332) | hypothetical protein MSMEG_1936 |
| M. thermoresistible (build 8) | TH_0451 | - | 1e-160 | 78.98% (333) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_2528 | - | 1e-133 | 65.86% (331) | hypothetical protein MUL_2528 |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_1796|M.vanbaalenii_PYR-1 -----------MRGG----QQGQER-------------------------
Mflv_4671|M.gilvum_PYR-GCK MTVLPLADPTPQDGARPRPHAGTPRARTSVARRTFTSLDLCHPVSVTYDP
MSMEG_1936|M.smegmatis_MC2_155 -----MTYDPGRRGG-----------------------------------
TH_0451|M.thermoresistible__bu --------------------------------------------------
MLBr_00816|M.leprae_Br4923 ------------------------------------------MSSPGPVG
MAV_4154|M.avium_104 -------MRPSSTSSSLAEAVSGGRFGRATDGAAGRLCNPGKMTSQRPPR
Mb3232c|M.bovis_AF2122/97 --------------------------------------------------
Rv3207c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_1351|M.marinum_M ------------------------------------------MTHPRPSR
MUL_2528|M.ulcerans_Agy99 --------------------------------------------------
MAB_3526c|M.abscessus_ATCC_199 --------------------------------------------------
Mvan_1796|M.vanbaalenii_PYR-1 ---RAPVLR-DEWREPLRAQRDPLAEHPGRVRSNREDHKRWRKQTWIGRF
Mflv_4671|M.gilvum_PYR-GCK GRGRVPVLR-DEWREPLRAQRDPLAEHPGRVRSNRDEHRRWRKQTWIGRF
MSMEG_1936|M.smegmatis_MC2_155 --GYVPALR-DEWREPLRAQRDPVAVDSGRVRSNRDDHQRWRKQTWLGRF
TH_0451|M.thermoresistible__bu ----VPALR-NEWREPLRAKRDPLASDSGRVRSNREDRRRWRKQTWLGRF
MLBr_00816|M.leprae_Br4923 SPGRVPVLR-EEWRAPLRAQREPLARGEGRVRVNRGRSRRWRKQTRLGRF
MAV_4154|M.avium_104 STGRVPVLR-DEWREPLRALRDPLAREAGRTRADRERPRQWRKQTWLGRF
Mb3232c|M.bovis_AF2122/97 --------------------------------------------------
Rv3207c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_1351|M.marinum_M SSGQVPVLR-DEWREPLRAQRDPLGQAAGRARVDRDRPRQWRKQSWLGRF
MUL_2528|M.ulcerans_Agy99 ------MLR-DEWREPLRAQRDPLGQAAGRARVDRDRPRQWRKQSWLGRF
MAB_3526c|M.abscessus_ATCC_199 -MSRLPVQESSERYEPLRAQRDPLAEGSGRIRSDRRDRDRWRKQTWLGRF
Mvan_1796|M.vanbaalenii_PYR-1 VSTYGWRAYALPLLVALTAVVIFQTITGTSAP--QAVEDEGPVQGPPTIG
Mflv_4671|M.gilvum_PYR-GCK VSTYGWRAYALPLLVVLTAVVIYQTITGTSAP--QAVEDEGPVQGPPTIG
MSMEG_1936|M.smegmatis_MC2_155 VSTYGWRAYALPVLIVLTVVVVYQTVTGTAAPP-QAAEAEGPVQGPPTLD
TH_0451|M.thermoresistible__bu VSTYGWRAYALPVLTVLTVVVIYQTIAGTGVGS-DPDADGGPLQGPPTMD
MLBr_00816|M.leprae_Br4923 VSVFGWRAYALPFLMALTAVVLYQTVTGTNAP---EPAASEPITEPPVIG
MAV_4154|M.avium_104 VSTYGWRAYALPALVVLTAVVIYQTVTGTSSP---KPTASQPIQSPTAIG
Mb3232c|M.bovis_AF2122/97 MSTYGWRAYALPVLMVLTTVVVYQTVTGTSTP---RPAAAQTVRDSPAIG
Rv3207c|M.tuberculosis_H37Rv MSTYGWRAYALPVLMVLTTVVVYQTVTGTSTP---RPAAAQTVRDSPAIG
MMAR_1351|M.marinum_M VSTYGWRAYALPVLMVLTVVVGYQTVTGTTSP---KPAAAEAVHDTPNIG
MUL_2528|M.ulcerans_Agy99 VSTYGWRAYALPVLMVLTVVVGYQTVTGTTSP---KPAAAEAVHDTPNIG
MAB_3526c|M.abscessus_ATCC_199 ISTYGWRAYAIPLLVALTVFVGYQTVTQREHVHGGADGPNEPVADPPSIG
:*.:******:* * .**..* :**:: .: .. :.
Mvan_1796|M.vanbaalenii_PYR-1 VPSTAIVGAPPKGLTQFDANLPTGILPAGGPFTEAGARTWRVVPGSAPQV
Mflv_4671|M.gilvum_PYR-GCK VPSTSIVGAPPKGLTEFDANLPTGILPQGGPFTEAGAGTWHIVPGALPQV
MSMEG_1936|M.smegmatis_MC2_155 VG-TAIVGAPPKGLTQFDANLPTGILPAGGAFTEAGAKTWHIVPGTTPKI
TH_0451|M.thermoresistible__bu AA-STIVGAPPKGLTEFDANLPTGILPEGGPYTLAGAKTWRIVPGTTPQV
MLBr_00816|M.leprae_Br4923 AVGTAIMDVPPRGLAAFDANLPAGTLPDGGAFTEAGDKTWHVVPGTMPQI
MAV_4154|M.avium_104 AVGTTIIDAPPRGLAAFDANLPAGTLPDGGPFTEAGDKTWHVVPGVTPQI
Mb3232c|M.bovis_AF2122/97 VVGTAILDAPPRGLAVFDANLPAGTLPDGGPFTEAGDKTWRVVPGTTPQV
Rv3207c|M.tuberculosis_H37Rv VVGTAILDAPPRGLAVFDANLPAGTLPDGGPFTEAGDKTWRVVPGTTPQV
MMAR_1351|M.marinum_M SVGTSIIDTPPRGLAAFDANLPAGTLPAGGPYTQAGDKTWRVVPGTTPQV
MUL_2528|M.ulcerans_Agy99 SVGTSIIDTPPRGLATFDANLPAGTLPAGGPYTQAGDKTRRVVPGTTPQV
MAB_3526c|M.abscessus_ATCC_199 ALGDAIIGAPPKGLTQFDASLPDGVLPEGEPFTAQGARTWHIVPGTTPQV
:*:..**:**: ***.** * ** * .:* * * ::*** *::
Mvan_1796|M.vanbaalenii_PYR-1 GQGTTKVFTYSVEIEDGIDTTTFGGDDGFARMVSETLANPKSWTHNPQFA
Mflv_4671|M.gilvum_PYR-GCK GQGTTKVFTYTVEVEDGVDTTTFGGDEGFARMVSETLANPKSWTHNAQFG
MSMEG_1936|M.smegmatis_MC2_155 GAGETKSFTYTIEVEDGLDTTPFGGDDGFARMVDETLANPKSWTHNGLFA
TH_0451|M.thermoresistible__bu GEGTERVFTYTVEVEDGVDTTAYGGDDGFARMVTETLANPKSWIHNPQFG
MLBr_00816|M.leprae_Br4923 SQSATKVFKYSIEIENGLDPTMFGGDGAFAQMVDQTLANPKGWTHNPQFA
MAV_4154|M.avium_104 GQGTAKVFKYSVEVENGIDPTMFGGDDAFAQMVDQTLANPKGWTHNPQFA
Mb3232c|M.bovis_AF2122/97 GQGTVKVFRYTVEIENGLDPTMYGGDNAFAQMVDQTLTNPKGWTHNPQFA
Rv3207c|M.tuberculosis_H37Rv GQGTVKVFRYTVEIENGLDPTMYGGDNAFAQMVDQTLTNPKGWTHNPQFA
MMAR_1351|M.marinum_M GQGTGKVFRYTVEVENGLDPTMYGGDDAFAQMIDQTLANPKGWTHDPQFA
MUL_2528|M.ulcerans_Agy99 GQGTGKVFKYTVEVENGLDPTMYGGDDAFAQMIDQTLANPKGWTHDPQFA
MAB_3526c|M.abscessus_ATCC_199 GQGAAKVFSYTIEVEDGIDTMGFGGDEAFARMATQTLASQKSWTHNPQFA
. . : * *::*:*:*:*. :*** .**:* :**:. *.* *: *.
Mvan_1796|M.vanbaalenii_PYR-1 FTRVDAASGVTPDFRVSLTSPMTIRDGCGYDIQLEASCYNPAFE--G-QP
Mflv_4671|M.gilvum_PYR-GCK FTRVDAAAGVVPDFRVSLTSPMTIRQGCGYDIQLEASCYNPAFG--G-QP
MSMEG_1936|M.smegmatis_MC2_155 FTRVDAGSGVEPDFRVSLTSPMTVREGCGYDIPLEASCYNPSYN--GSDA
TH_0451|M.thermoresistible__bu FIRVDAGYPGQPDFRVSLTSPMTVREGCGYEIQLEASCYNPSYG--G-QP
MLBr_00816|M.leprae_Br4923 FTRIDT---GMPDFRISLVSPLTIRAGCGYEFRLETSCYNPSFG-PDRQA
MAV_4154|M.avium_104 FIRVDATAGAKPDFRISLVSPVTVREGCGYEFRLETSCYNPVFG-ANREA
Mb3232c|M.bovis_AF2122/97 FVRIDS---GKPNFRISLVSPTTVRGGCGYEFRLETSCYNPSFGGMDRQS
Rv3207c|M.tuberculosis_H37Rv FVRIDS---GKPDFRISLVSPTTVRGGCGYEFRLETSCYNPSFGGMDRQS
MMAR_1351|M.marinum_M FMRIDT---GKPDFRISLVSPVTVREGCGYEFPLETSCYNPSYG-PDRQA
MUL_2528|M.ulcerans_Agy99 FMRIDT---GKPDFRISLVSPVTVREGCGYEFPLETSCYNPSYG-PDRQA
MAB_3526c|M.abscessus_ATCC_199 FVRIDA---GTPDFRISLTSPDTVREGCGYEIQLESSCYNPRYG-ENGEQ
* *:*: *:**:**.** *:* ****:: **:***** : . :
Mvan_1796|M.vanbaalenii_PYR-1 RVFINEARWVRGAVPFQGDIGSYRQYLINHEVGHAIGYQRHEQCTANGEL
Mflv_4671|M.gilvum_PYR-GCK RVFINEARWVRGAVPFQGDIGSYRQYVINHEVGHAIGYQRHEQCTENGAL
MSMEG_1936|M.smegmatis_MC2_155 RVFINEARWVRGAVPFQGDIGSYRQYVINHEVGHAIGYQRHEACPGNGDL
TH_0451|M.thermoresistible__bu RVFINEARWVRGAVSFQGDIGSYRQYLINHEVGHAIGYQRHEGCGGEGEL
MLBr_00816|M.leprae_Br4923 RVLINEARWLRGALPFEGDVGSYRQYVINHEVGHAIGYVRHEPCDKQGGL
MAV_4154|M.avium_104 RVFINEARWVRGAVPFEGDVGSYRQYVINHEVGHAIGYLHHEPCEQQGAL
Mb3232c|M.bovis_AF2122/97 RVFINEARWVRGAVPFEGDVGSYRQYVINHEVGHAIGYLRHEPCDQQGGL
Rv3207c|M.tuberculosis_H37Rv RVFINEARWVRGAVPFEGDVGSYRQYVINHEVGHAIGYLRHEPCDQQGGL
MMAR_1351|M.marinum_M RVFINEARWVRGAVPFEGDIGSYRQYVINHEVGHAIGYLRHEACEKPGGL
MUL_2528|M.ulcerans_Agy99 RVFINEARWVRGAVPFEGDIGSYRQYVINHEVGHAIGYLRHEACEKPGGL
MAB_3526c|M.abscessus_ATCC_199 RVFINEARWVRGAVPFQGDITSYRQYVINHEVGHAIGYRSHEPCEQDQQL
**:******:***:.*:**: *****:*********** ** * *
Mvan_1796|M.vanbaalenii_PYR-1 APIMMQQTFSTNNNDAAKFDPGTVTPDGLTCRFNPWPYPIA
Mflv_4671|M.gilvum_PYR-GCK APIMMQQTFSTNNNDAARFDPGTVTPDGLSCRFNPWPYPIA
MSMEG_1936|M.smegmatis_MC2_155 APIMMQQTFSTSNDDAAKFDPETVQGDGLTCRFNPWPYPIA
TH_0451|M.thermoresistible__bu APVMMQQTFSTNNDDAARFDPGTVQADGLTCRFNPWPYPIA
MLBr_00816|M.leprae_Br4923 APVMMQQTFSTSNNDGAKFDPEWVKPDGKTCRFNPWPYPIA
MAV_4154|M.avium_104 APVMMQQTFSTSNNDAAQFDPDVVKADGKTCRFNPWPYPIA
Mb3232c|M.bovis_AF2122/97 APVMMQQTFSTSNDDAAKFDPDFVKADGKTCRFNPWPYPIP
Rv3207c|M.tuberculosis_H37Rv APVMMQQTFSTSNDDAAKFDPDFVKADGKTCRFNPWPYPIP
MMAR_1351|M.marinum_M APVMMQQTFSTSDDEAAPFDPEFVKADGKTCHFNPWPYPIA
MUL_2528|M.ulcerans_Agy99 APVMMQQTFSTSDDEAAPFDPEFVKADGKTCHFNPWPYPIA
MAB_3526c|M.abscessus_ATCC_199 APVMMQQTFSTSNDVAAKFDPDSIKPDGKTCRTNPWPYPIP
**:********.:: .* *** : ** :*: *******.