For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VADTVWTLDSSDGALTVTTGVAGPAAAMGHRLTIAMAWQATVRWADEPVSMELTVDVGSLEVLRGEGGVK GLTGPEKALARSNALKTLEAKRFPHIIFRSDRIAKTDDGYRLTGTLEVHGKAREQVVDLRVDDLGDSWRM SCEAVVRHSDFGVKPYSMMMGAMKVDDEVTVAFSAERAK
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1166 | - | - | 100% (179) | hypothetical protein Mvan_1166 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1923c | - | 1e-60 | 61.33% (181) | hypothetical protein Mb1923c |
| M. gilvum PYR-GCK | Mflv_5164 | - | 9e-66 | 67.05% (173) | hypothetical protein Mflv_5164 |
| M. tuberculosis H37Rv | Rv1890c | - | 2e-60 | 61.33% (181) | hypothetical protein Rv1890c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3086 | - | 2e-38 | 49.43% (174) | hypothetical protein MAB_3086 |
| M. marinum M | MMAR_2781 | - | 8e-66 | 67.40% (181) | hypothetical protein MMAR_2781 |
| M. avium 104 | MAV_2813 | - | 2e-55 | 57.78% (180) | hypothetical protein MAV_2813 |
| M. smegmatis MC2 155 | MSMEG_0101 | - | 4e-43 | 50.84% (179) | hypothetical protein MSMEG_0101 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2966 | - | 2e-65 | 66.85% (181) | hypothetical protein MUL_2966 |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_1166|M.vanbaalenii_PYR-1 --------------------MADTVWTLDSSDGALTVTTGVAGPAAAMGH
Mflv_5164|M.gilvum_PYR-GCK ----------------------MTTWELDPSDGELLLTTGVTGPAAKMGH
Mb1923c|M.bovis_AF2122/97 MAHKTRREGRAGRSSEYSRGVSDAVWTLDASDGELVLRTGVVGRAARLGH
Rv1890c|M.tuberculosis_H37Rv MAHKTRREGRAGRSSEYSRGVSDAVWTLDASDGELVLRTGVVGRAARLGH
MAV_2813|M.avium_104 -------------------MASDDAWTIGPADGELLLHTGVTGRAARMGH
MMAR_2781|M.marinum_M ---------MRVRPSEYSRVVSEAVWTLDASDGELFIGTGVAGRAAKMGH
MUL_2966|M.ulcerans_Agy99 --------------------MSEAVWTLDASDGELLIGTGVAGRAAKMGH
MSMEG_0101|M.smegmatis_MC2_155 -------------------MNDNATWTLSASDGELLLHTGVTGTAARVGH
MAB_3086|M.abscessus_ATCC_1997 ----------------------MSSWTLGPENGTLTLHTGVTGAAARMGH
* :.. :* * : ***.* ** :**
Mvan_1166|M.vanbaalenii_PYR-1 RLTIAMA-WQATVRW-----ADEPVSMELTVDVGSLEVLRGEGGVKGLTG
Mflv_5164|M.gilvum_PYR-GCK RLTIAVQ-WRATVEWD----GDRPVSVEMTVDVGSLEVLGGEGGVTGLSG
Mb1923c|M.bovis_AF2122/97 RLTIAMTRWQALVNWS----GTDPVAGELVAEVDSFEVMRGEGGVKGLSE
Rv1890c|M.tuberculosis_H37Rv RLTIAMTRWQALVNWS----GTDPVAGELVAEVDSFEVMRGEGGVKGLSE
MAV_2813|M.avium_104 RLTIAMTRWRGGVGWA----GSRPVRAELAVEVDSVEVLRGEGGVKGLST
MMAR_2781|M.marinum_M RLTIAMTRWQATVNWV----ADEPSAAELIVEVDSLEVLRGEGGVKGLSG
MUL_2966|M.ulcerans_Agy99 RLTIAMTRWQATVNWV----ADEPSAAELIVEVDSLEVLRGEGGVKGLSG
MSMEG_0101|M.smegmatis_MC2_155 RLTIAMRSWEATVFWEGDGAGAEPVKAELTIDIDSLEVVGSEGGMTPLSG
MAB_3086|M.abscessus_ATCC_1997 RLTIVMDAWTISVDGP----DDQPSAVSLVVDVDSLRVESGEGGLTPLTG
****.: * * * .: ::.*..* .***:. *:
Mvan_1166|M.vanbaalenii_PYR-1 PEKALARSNALKTLEAKRFPHIIFRSDRIAKTDDGYRLTGTLEVHGKARE
Mflv_5164|M.gilvum_PYR-GCK PEKALARANALKTLQAKRFPQIVFRTSSIEPTDHGYLLHGTLDLHGRSRD
Mb1923c|M.bovis_AF2122/97 PEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSRE
Rv1890c|M.tuberculosis_H37Rv PEKALVRANALKTLNASRFPHIRFTTEAIAQTGNGYRLTGKLHIRGKSRE
MAV_2813|M.avium_104 AEKALVRSNALKSLNASRFPEIRYTSDVIEHTGDGYRLTGTLQIRGTARN
MMAR_2781|M.marinum_M PEKVLVRSNALKSLRADRFPRIEFAADAIEKTADGYRLSGALHIHGTSHQ
MUL_2966|M.ulcerans_Agy99 PEKVLVRSNALKSLRADRFPRIEFSADAIEKTADGYRLSGALHIHGTSHQ
MSMEG_0101|M.smegmatis_MC2_155 AEKTLIRNNALKLLRARRFPQARFVSSDIERDGDIVRMHGAFELFGKVRD
MAB_3086|M.abscessus_ATCC_1997 PEKTIVRSNALKTLNAQRFPTIEFHAEQIGKTAAGYVMRGALTIHGATRA
.**.: * **** *.* *** : :. * : * : : * :
Mvan_1166|M.vanbaalenii_PYR-1 QVVDLRVDDLGDSWRMSCEAVVRHSDFGVKPYSMMMGAMKVDDEVTVAFS
Mflv_5164|M.gilvum_PYR-GCK RVLEVEVEDLGEQWQMGCRATVSHADHGLKPYSMMMGAMKVADEVAVSFT
Mb1923c|M.bovis_AF2122/97 HVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFT
Rv1890c|M.tuberculosis_H37Rv HVIDLHTEDLGAAWRISADTTVRQSNYGVKPYSLLMGSIRVADEVSVAFT
MAV_2813|M.avium_104 RVIDLRTEDLGEAWRLSVETTVRQSDYGIKPFSLLMGSVQVADDVSLSFT
MMAR_2781|M.marinum_M HVIDLHTDDLGDSWRMSTETAVRQSDYGVKPYSLLMGSLQVADEVTISFS
MUL_2966|M.ulcerans_Agy99 HVIDLHTDDLGDSWRMSTETAVRQSDYGVKPYLLLMGSLQVADEVTISFS
MSMEG_0101|M.smegmatis_MC2_155 HVLEVRIDDG----VISGQTVVRHSDYGIKQYSMLIGAMKVADDVRVTFT
MAB_3086|M.abscessus_ATCC_1997 VDIELSVAADG---ALSLSTDVSQRAYGIKPFSMAMGSLKVADAVTVSFE
::: :. : * : .*:* : : :*:::* * * ::*
Mvan_1166|M.vanbaalenii_PYR-1 AERAK------
Mflv_5164|M.gilvum_PYR-GCK ARHPT------
Mb1923c|M.bovis_AF2122/97 AVRAKDD----
Rv1890c|M.tuberculosis_H37Rv AVRAKDD----
MAV_2813|M.avium_104 AVHAKDRAEDR
MMAR_2781|M.marinum_M AVRAKNG----
MUL_2966|M.ulcerans_Agy99 AVRAKNG----
MSMEG_0101|M.smegmatis_MC2_155 ATHRAAR----
MAB_3086|M.abscessus_ATCC_1997 GRRPGA-----
. :