For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGFCVFCGGELTDTMRCTSCGAVNVGGTWHESAYVVPGDASVGAGAGWHPDPTGRHEGRYFVGGQPTDLI RDGGVEALDPMGKQQLELAGAEPVSTPVTARTGPRWWIVTAAVLALLALVGAGVGAYAYLNRDRTTVDER YLVALKQSGFSGDFNSDANAVAHGKQVCRTLEDGGPQQGMPADEVAVQHFCPQFVEGFHVLQTATISGSF TLNDEDPNPYFPAIEVDGSSCVGAGGYSDVNPGTPVTVKNGKGEILTTTYLEEGKGGRFRCTFGFTFDVT EGQDRYVVAVGKRGELSYSFDELRAGGVALVLG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1129 | - | - | 100% (313) | hypothetical protein Mvan_1129 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0638 | - | 1e-113 | 59.12% (318) | hypothetical protein Mb0638 |
M. gilvum PYR-GCK | Mflv_5183 | - | 1e-156 | 84.35% (313) | hypothetical protein Mflv_5183 |
M. tuberculosis H37Rv | Rv0622 | - | 1e-113 | 59.12% (318) | hypothetical protein Rv0622 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_2908 | - | 5e-05 | 39.13% (69) | hypothetical protein MAV_2908 |
M. smegmatis MC2 155 | MSMEG_6737 | - | 1e-74 | 47.59% (311) | hypothetical protein MSMEG_6737 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_1129|M.vanbaalenii_PYR-1 MG-------FCVFCGGELTDTMRCTSCG-AVNVGGTWHESAYVVPGDASV Mflv_5183|M.gilvum_PYR-GCK MG-------FCVFCGGALTDAMRCHSCG-AVNIAGTWHESAYSG------ Mb0638|M.bovis_AF2122/97 MS-------FCVYCGAELADPTRCGACG-AYKIGSTWHRTTTPTVG--AA Rv0622|M.tuberculosis_H37Rv MS-------FCVYCGAELADPTRCGACG-AYKIGSTWHRTTTPTVG--AA MSMEG_6737|M.smegmatis_MC2_155 MATDGGSGRQSTYANHAGGMPMSCPYCGFEVAADGTCSRCGRAESS---- MAV_2908|M.avium_104 -------------------------------------------------- Mvan_1129|M.vanbaalenii_PYR-1 GAGAGWHPDPTGRHEGRYFVGGQPTDLIRDGGVEALDPMGKQQLELAGAE Mflv_5183|M.gilvum_PYR-GCK GTGGGWQPDPTGRHEGRYFVGGQPTDLIRDGGVEALDPMGRQQLEPAVVE Mb0638|M.bovis_AF2122/97 TTATGWRPDPTGRHEGRYFVAGQPTDLVREGDAEAVDPLGQQQLDQSGAV Rv0622|M.tuberculosis_H37Rv TTATGWRPDPTGRHEGRYFVAGQPTDLVREGDAEAVDPLGQQQLDQSGAV MSMEG_6737|M.smegmatis_MC2_155 VSLSGWRPDPTARYEGRYYTAGRPTNRVRNGKHEASDPTGGQMLP----D MAV_2908|M.avium_104 -------------------------------------------------- Mvan_1129|M.vanbaalenii_PYR-1 PVSTPVT---ARTGPRW-WIVTAAVLALLALVGAGVGAYAYLNRDRTTVD Mflv_5183|M.gilvum_PYR-GCK HLSVPE----GRRGRRR-WMVAAAVAAVLAIAGAGVGAYAYVNRDRTTVD Mb0638|M.bovis_AF2122/97 GVSPSAVSGWVRSGHRRLWWALAGVVAFLGLVGAGVVGTLFLNRDRESID Rv0622|M.tuberculosis_H37Rv GVSPSAVSGWVRSGHRRLWWALAGVVAFLGLVGAGVVGTLFLNRDRESID MSMEG_6737|M.smegmatis_MC2_155 YVELPAS----RSSIRTTWITTGAVTAIIVMAAAMAWGLLVAHRRPPPPP MAV_2908|M.avium_104 -----------------MMKRLLAALGASAMIGATIGLAAPAHADPPPVP .. . : .* : . Mvan_1129|M.vanbaalenii_PYR-1 ER----YLVALKQSGFSGDFNSDANAVAHGKQVCRTLEDGGPQQGMPADE Mflv_5183|M.gilvum_PYR-GCK DR----YLVAIKQSGFAGEFNSDANAVAHGKQVCRALEGGGPQQGMPADE Mb0638|M.bovis_AF2122/97 DK----YLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQGMPVDQ Rv0622|M.tuberculosis_H37Rv DK----YLAALRRSGLTGEFNSDANAIARGKQVCRQLQDGGEQQGMPVDQ MSMEG_6737|M.smegmatis_MC2_155 ETG---YLAALRDTGLMNQFNSDANAIAHGHQVCRRLEDGEPQQGQPADK MAV_2908|M.avium_104 DGDDGGFVAALQQAGFS--FSSPGSAVAAGRAVCSCLNNGEP-------- : ::.*:: :*: *.* ..*:* *: ** *:.* Mvan_1129|M.vanbaalenii_PYR-1 VAVQHFCPQFVEGFHVLQTATISGSFTLNDEDPNPYFPAIEVDGSSCVGA Mflv_5183|M.gilvum_PYR-GCK VAVQYFCPQFVEGFHVLETATISGSFTLNDEDPNPYSPAIEVDGSSCVGA Mb0638|M.bovis_AF2122/97 VAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGS Rv0622|M.tuberculosis_H37Rv VAVQYYCPQFSDGFHILETITVTGSFTLKDESPNVYAPAITVSGSGCSGS MSMEG_6737|M.smegmatis_MC2_155 IAVDTFCPHFAQGFHVLDTVKVSGIFVLTDSLG---AEGIAVDGSSCTGN MAV_2908|M.avium_104 ------------GLEVVHDVKTH--------------------------- *:.::. . Mvan_1129|M.vanbaalenii_PYR-1 GGYSDVNPGTPVTVKNGKGEILTTTYLEEGKGGRFRCTFGFTFDVTEGQD Mflv_5183|M.gilvum_PYR-GCK GGYSDVNPGTPVTVKNGKGEILTTTYLEDGRGGRFRCTFGFTFEVTEGQD Mb0638|M.bovis_AF2122/97 AGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGED Rv0622|M.tuberculosis_H37Rv AGYADIDRGTQVTVKNGQGDILATAFLQAGQGGRFLCTFPFSFEITEGED MSMEG_6737|M.smegmatis_MC2_155 SGYSDIGPDTDVTVKNGKGEILTTTTLGRGTGGSAECRFTFAFPVTEGED MAV_2908|M.avium_104 ------NPGMDMEMASN------FALLS----AKYYCPHQLSKA------ . . : : .. : * . * . :: Mvan_1129|M.vanbaalenii_PYR-1 RYVVAVGKRGELSYSFDELRAGGVALVLG- Mflv_5183|M.gilvum_PYR-GCK RYVVAVGRRGELSYSFDELRAGGVSLVLG- Mb0638|M.bovis_AF2122/97 RYVVSVSRRGEMSYSFADLKANGLSLVLG- Rv0622|M.tuberculosis_H37Rv RYVVSVSRRGEMSYSFADLKANGLSLVLG- MSMEG_6737|M.smegmatis_MC2_155 LYIVSVGRRGEFRYSFDQLRSRGVQVHLGT MAV_2908|M.avium_104 ------------------------------