For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTELLRRLKALWQYAVPHLYGEPGESRSARVWRRIRIGIVVAACLVTLQSVLLVLGAWRNDRQIERHLGV AEATVLDAGQRRSTIEFVTPDRITYRPELGVLYPSELEDGMRIYVEYDTNNPDLVRVQHRNAALAIIPAG SIAVVGWLVAGGALGGTALIERRGRRRAAV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0976 | - | - | 100% (170) | putative transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0571 | - | 1e-49 | 67.13% (143) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_5262 | - | 2e-72 | 79.19% (173) | hypothetical protein Mflv_5262 |
| M. tuberculosis H37Rv | Rv0556 | - | 5e-50 | 62.89% (159) | transmembrane protein |
| M. leprae Br4923 | MLBr_02271 | - | 1e-46 | 59.35% (155) | hypothetical protein MLBr_02271 |
| M. abscessus ATCC 19977 | MAB_3932c | - | 2e-50 | 70.50% (139) | hypothetical protein MAB_3932c |
| M. marinum M | MMAR_0902 | - | 7e-50 | 67.81% (146) | hypothetical protein MMAR_0902 |
| M. avium 104 | MAV_4587 | - | 2e-46 | 63.40% (153) | hypothetical protein MAV_4587 |
| M. smegmatis MC2 155 | MSMEG_1110 | - | 1e-66 | 77.07% (157) | transmembrane protein |
| M. thermoresistible (build 8) | TH_1120 | - | 9e-68 | 74.52% (157) | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_0655 | - | 1e-47 | 69.92% (133) | hypothetical protein MUL_0655 |
CLUSTAL 2.0.9 multiple sequence alignment
MLBr_02271|M.leprae_Br4923 -------------MILSKSLLR-----------ILIHGRSDEPPSTRARV
MAV_4587|M.avium_104 -------------------MLH-----------ILIHGRSDPPETTRGRI
Mb0571|M.bovis_AF2122/97 -------------MISPKPLLH-----------ILIHGRSDELPDTRGRI
Rv0556|M.tuberculosis_H37Rv -------------MISPKPLLH-----------ILIHGLSDELPDTRGRI
MMAR_0902|M.marinum_M -------------MTSPKKLLR-----------ILIHGTTEEMPDTPART
MUL_0655|M.ulcerans_Agy99 -------------MTSPKKLLR-----------ILIHGTTEEMPDTPART
MAB_3932c|M.abscessus_ATCC_199 -------------------------------------------MNRRARV
Mvan_0976|M.vanbaalenii_PYR-1 ---------MTELLRRLKALW-----------QYAVPHLYGEPGESRSAR
Mflv_5262|M.gilvum_PYR-GCK -------MTATDVLDRGRARWR-------AVRPYLTAFLFGAGGDTRRAK
MSMEG_1110|M.smegmatis_MC2_155 ----------MPVADRVRAAAR-----------VVLPHLYGEPGETRRQR
TH_1120|M.thermoresistible__bu VTRGPKTDGVTGAADRARAALEVLGARARAVWAVVMPHLYGEPGETRSQR
MLBr_02271|M.leprae_Br4923 IMRWGRIAVLIVTGLITLQSVLLVAGAWRNDLTIQHNMGVAQAEVLSAGP
MAV_4587|M.avium_104 ALRWARIAVLIVTGLVTLQSVLLVAGAWRNDLAITHNMGVAQAEVLSAGP
Mb0571|M.bovis_AF2122/97 VLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGP
Rv0556|M.tuberculosis_H37Rv VLRWLRIAVLIVTGLVTLQSVLLVAGAWRNDIAIQRNMGVAQAEVLSAGP
MMAR_0902|M.marinum_M VVRWIRISVLILTGLVTLQSILLVAGAWRNDLAIDRNMGVAQAEVLSAGP
MUL_0655|M.ulcerans_Agy99 VVHWIRISVLILTGLVTLQSILLVAGAWRIDLAIDRNMGVAQAEVLSAGP
MAB_3932c|M.abscessus_ATCC_199 ITR-VRIGVLILAGLMTLQSLLLVAGAWRNDKAIERDMGVALAEVLSAGP
Mvan_0976|M.vanbaalenii_PYR-1 VWRRIRIGIVVAACLVTLQSVLLVLGAWRNDRQIERHLGVAEATVLDAGQ
Mflv_5262|M.gilvum_PYR-GCK VFRRIRIGIIVLACLVTLQSVLLVLGAWRNDRQIERHLGVAEATVLDAGP
MSMEG_1110|M.smegmatis_MC2_155 IIRRVRIGIVIAACLVTLQSVLLVLGAWRNDRQIERNMGVAAAEVLSAGP
TH_1120|M.thermoresistible__bu ILRRVRIGLVIAACVITLQSVLLVVGAWRNDRQIERNMGVAEALVLDAGP
: **.::: : ::****:*** **** * * :.:*** * **.**
MLBr_02271|M.leprae_Br4923 RRSTIEFVTPERVTYRPELGVLYLSELSTGMRIYVEYNKNDPNLVRVRHR
MAV_4587|M.avium_104 RRSTIEFVTPERVTYRPELGVLYPSHLATGMRIYVEYNKNDPNLVRVQHR
Mb0571|M.bovis_AF2122/97 RRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHR
Rv0556|M.tuberculosis_H37Rv RRSTIEFVTPDRITYRPQLGVLYPSELSTGMRIYVEYNKRDPNLVRVQHR
MMAR_0902|M.marinum_M RRSTIEFVTPDRVTYRPELGVLYPSELATGMRIYVEYNKRDPNLVRVQHR
MUL_0655|M.ulcerans_Agy99 RRSTIEFVTPDRVTYRPELGVLYPSELATGMRIYVEYNKRDPNLVRVQHR
MAB_3932c|M.abscessus_ATCC_199 RRSTIEFVTPERVTYRPELGVLYPSELSPGMRIYVEYDKSNPDLVRVQGR
Mvan_0976|M.vanbaalenii_PYR-1 RRSTIEFVTPDRITYRPELGVLYPSELEDGMRIYVEYDTNNPDLVRVQHR
Mflv_5262|M.gilvum_PYR-GCK RRSTIEFVTPDRITYRPELGVLYPSELENGMRIYVEYDVNNPDLVRVQHR
MSMEG_1110|M.smegmatis_MC2_155 RRSTIEFVTPDRVTYRPELGVLYPSELDTGMRIYVEYDKNNPELVRVRDR
TH_1120|M.thermoresistible__bu RRSTIEFVTPERVTYRPELGVLYPSELDTGMRIYVEYDVNDPELVRVQDR
**********:*:****:***** *.* ********: :*:****: *
MLBr_02271|M.leprae_Br4923 NAGLAIIPAGSIAVVCWLAATVVLVALAVLDKRLDRHTESSAVPSQPTS-
MAV_4587|M.avium_104 NAGLAIIPAGSIAVVGWLGAAVLLVLLALADKWLDRRGKG-AGPADFA--
Mb0571|M.bovis_AF2122/97 NAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG-----
Rv0556|M.tuberculosis_H37Rv NAGLAIIPAGSIAVVAWLIAAAALVVLAVLDKRLERRENSASATG-----
MMAR_0902|M.marinum_M NAGLAIIPAGSIAVVAWLVATVALVGLALLDRRLDKRPDQRADTMSTP--
MUL_0655|M.ulcerans_Agy99 NAGLAIIPAGSIAAVAWLVTTVALVGLALLDRRLDKRPDQRADTMSTP--
MAB_3932c|M.abscessus_ATCC_199 NASLSIIPAGSIIVVVWTVTGTVLLGLAWLRRRGPAPAHA----------
Mvan_0976|M.vanbaalenii_PYR-1 NAALAIIPAGSIAVVGWLVAGGALGGTALIERRGRRRAAV----------
Mflv_5262|M.gilvum_PYR-GCK NAALAIIPAGSIAVVGWLVAAAALGATALIERRTQRPVSV----------
MSMEG_1110|M.smegmatis_MC2_155 NAALAIIPAGSIAVVGWMIAGAALVGLWLLQRRT----------------
TH_1120|M.thermoresistible__bu NALLAIVPAGSIAVLGWIVVGAALVGLAFLQRRLESRTPTPAEPARTHTS
** *:*:***** .: * . * :
MLBr_02271|M.leprae_Br4923 -
MAV_4587|M.avium_104 -
Mb0571|M.bovis_AF2122/97 -
Rv0556|M.tuberculosis_H37Rv -
MMAR_0902|M.marinum_M -
MUL_0655|M.ulcerans_Agy99 -
MAB_3932c|M.abscessus_ATCC_199 -
Mvan_0976|M.vanbaalenii_PYR-1 -
Mflv_5262|M.gilvum_PYR-GCK -
MSMEG_1110|M.smegmatis_MC2_155 -
TH_1120|M.thermoresistible__bu G