For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTHVATPAYPRRFMEGERRNRRMGRPLRILTRTVRLDPELTALIGKRLMHRDEVGAALVAAMKPDEADRP GRVSMGQFKQALEHGVEAVPDCPAPLREFFSVVENTPAWVDFDLVNRGAAAYRRLGTNAADVMLQLSLIG GYRFGGPTDLLVETGGLTGRTTVRRLAETQKWAVAVSQPDAMRRDGEGFKLTVHVRLMHALVNHQFERNG RWDIDRWGLPINQTDQAATLGLFNGALLLGVRMLGVRVSPEESRAIMHMWKYVGWLMGVDEDWLCDTEAQ QHRLNYHLLVTQSTVSEAGPALANAIVDAQRLLHYRNAPGLRGAYHRARLLSMLRYFLRAEGMDDLQLPR ALPWAVLPVFARNTVRYQVLSRTRHGRAYLERWGRRSSDRLLDKYFGEQQHDVGRLPC*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0954 | - | - | 100% (409) | hypothetical protein Mvan_0954 |
| M. vanbaalenii PYR-1 | Mvan_0167 | - | 7e-09 | 28.71% (202) | hypothetical protein Mvan_0167 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1995 | - | 3e-50 | 35.44% (364) | hypothetical protein Mflv_1995 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3301 | - | 2e-31 | 32.15% (311) | hypothetical protein MAB_3301 |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_6811 | - | 2e-55 | 37.26% (365) | hypothetical protein MSMEG_6811 |
| M. thermoresistible (build 8) | TH_1405 | - | 9e-51 | 35.18% (361) | conserved hypothetical protein |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_6811|M.smegmatis_MC2_155 -----MSVTIPTRHPDRPRPIPAGIRAIATALAIRQPTPQEWHILGERLT
TH_1405|M.thermoresistible__bu -----MGVPIPTRHPDRPRPIPAGVRATATALAIKNPTPQQWQLLGERLT
Mflv_1995|M.gilvum_PYR-GCK -----MSVPVPKRHPDRPRPIPAGVRALATALAIRNPDPQQWQDLGERLT
Mvan_0954|M.vanbaalenii_PYR-1 MVTHVATPAYPRRFMEGERRNRRMGRPLRILTRTVRLDPELTALIGKRLM
MAB_3301|M.abscessus_ATCC_1997 MGSKMASNWQKLPNPPQLREFPFNVFARFLPGRDIRATAEQRESFRRFAH
* . . .: : .
MSMEG_6811|M.smegmatis_MC2_155 VGDEPMDRLVEWMAATGMEQTR----PLFERALRDGIASVPDAPEPLREF
TH_1405|M.thermoresistible__bu VGDEPMDRVVEWMVATGTEQAR----MLFDRALSDGIQSVPDAPELLRGF
Mflv_1995|M.gilvum_PYR-GCK VGDGPMDRLVEWMAATGMEQTR----PLFDRALHGGIASVPDAPAPLREF
Mvan_0954|M.vanbaalenii_PYR-1 HRDEVGAALVAAMKPDEADRPGRVSMGQFKQALEHGVEAVPDCPAPLREF
MAB_3301|M.abscessus_ATCC_1997 AGDPLADAVVAMFARFPVGQGR----RMFETAIEEGIDAVENPPEELVAF
* :* : : *. *: *: :* : * * *
MSMEG_6811|M.smegmatis_MC2_155 FGTYETLPAWVDMETVRKGQRALRRGGADGMYIAR-DVSLLGGYQFSGFN
TH_1405|M.thermoresistible__bu FETYEPLPDWVDLDVVRKGQRALRRGGADGMYIAR-DVSLLGGYQFSGFN
Mflv_1995|M.gilvum_PYR-GCK FESVEVLPDWVDLALLRKGQRALRRGGADGMYVAR-DVSLLGGYQFSGFN
Mvan_0954|M.vanbaalenii_PYR-1 FSVVENTPAWVDFDLVNRGAAAYRRLGTNAADVML-QLSLIGGYRFGGPT
MAB_3301|M.abscessus_ATCC_1997 FEQIDARPYWLDDKKLELAARVSMRTGVVGLGLALPGLALTGGYLSSRAD
* : * *:* :. . . * *. . : ::* *** .
MSMEG_6811|M.smegmatis_MC2_155 KTLLRTGALE-KGSNKRFAETMQWAMDVIAEGGLEPLGVGYRSTIHVRLI
TH_1405|M.thermoresistible__bu KTLLRTGALE-KGSNKRFAETMQWALDVIAEGGLEPLGVGYRSTLRVRLI
Mflv_1995|M.gilvum_PYR-GCK KTLLRTGALE-KGSNKRFAETMQWAMDVISEGGLEGRGIGYRSTIRVRLI
Mvan_0954|M.vanbaalenii_PYR-1 DLLVETGGLTGRTTVRRLAETQKWAVAVSQPDAMRRDGEGFKLTVHVRLM
MAB_3301|M.abscessus_ATCC_1997 KPLVGTGNLQ-AMAPRRLNETAQWLIDVTSPGGLDRFSPGFKGIPRVRLM
. *: ** * : :*: ** :* : * ..: . *:: :***:
MSMEG_6811|M.smegmatis_MC2_155 HSFVRRHVSAMPDWRADEWGLPVNQTDMAATLVGALVAPAVGVAGMGVVL
TH_1405|M.thermoresistible__bu HSFVRRHVSAMPDWRADEWGVPINQTDMAATLVGALVAPAVGAIGMGVVL
Mflv_1995|M.gilvum_PYR-GCK HSFVRRHVAAMPDWRPEEWGLPVNQTDMAATLVGALVAPAVGAMGMGVVL
Mvan_0954|M.vanbaalenii_PYR-1 HALVNHQFERNGRWDIDRWGLPINQTDQAATLGLFNGALLLGVRMLGVRV
MAB_3301|M.abscessus_ATCC_1997 HALVRAAMNRRDDWDYEAWDSPVNQIQLAGTLMLFSLANLAGCQAMGMSF
*::*. . * : *. *:** : *.** * * :*: .
MSMEG_6811|M.smegmatis_MC2_155 SPSEYRAVAHLTRYVGWLIGVEDRWLPTSFRDSVRVLAHTLSALAEPDES
TH_1405|M.thermoresistible__bu SPSEYDAVAHLTRYVGWLMGVEDRWLPRNFRDAIRVLAHTLSALAEPDES
Mflv_1995|M.gilvum_PYR-GCK SPSEYNAVAHLTRYVGWLIGVEDAWLPQDFRDSVRVLAHTLSALAAPDES
Mvan_0954|M.vanbaalenii_PYR-1 SPEESRAIMHMWKYVGWLMGVDEDWLCDTEAQQHRLNYHLLVTQSTVSEA
MAB_3301|M.abscessus_ATCC_1997 SDSERESVFHFWRYVGLLMGIHPELVPTSEEDTWRLFWLEADTEFLPDDD
* .* :: *: :*** *:*:. : : *: : .:
MSMEG_6811|M.smegmatis_MC2_155 SRQLAAPMVQDPLTWHYDTLPGLRRRLARAQHLSITSAFLGRRTQSALGL
TH_1405|M.thermoresistible__bu SRQLAAPMVDDPLRWHYDTLPGLRRRFARAQHLSIASAFLGPRTVRELGL
Mflv_1995|M.gilvum_PYR-GCK SRQLAAPMIDDPLAWHYDTLTGVRRRLARAQHLSITSAFLGRRAVASLGL
Mvan_0954|M.vanbaalenii_PYR-1 GPALANAIVDAQRLLHYRNAPGLRGAYHRARLLSMLRYFLRAEGMDDLQL
MAB_3301|M.abscessus_ATCC_1997 SYALTQALHAS------IPGEPVFMRLSRTYLSSYSRLILGKTNADRLGL
. *: .: : *: * :* * *
MSMEG_6811|M.smegmatis_MC2_155 PTHALPWYPLLRLPVNVTRSVAALALPGGVEKADLRGQREHRKLLRTMIG
TH_1405|M.thermoresistible__bu PYYAPPWYPMLRLPLNLARSVAALTLPGGLERADQRGRRQHQKLLRTMIG
Mflv_1995|M.gilvum_PYR-GCK PSHGLPWYPLLRLPVNLARSAAALTLPGGIDRADQRGRREHAKLMRTMIG
Mvan_0954|M.vanbaalenii_PYR-1 P-RALPWAVLPVFARNTVRYQVLSRTRHGRAYLERWGRRSSDRLLDKYFG
MAB_3301|M.abscessus_ATCC_1997 PDNKPMQAAVVGTSVMNWFFERRNVLPGMTRISEEIGQFARRQIVSQGMS
* : . : *: ::: :.
MSMEG_6811|M.smegmatis_MC2_155 EQAEATIGESAQHVGRVA
TH_1405|M.thermoresistible__bu ADAEATIGESAAHVSQVA
Mflv_1995|M.gilvum_PYR-GCK VDGSATIGESAAHVSRVA
Mvan_0954|M.vanbaalenii_PYR-1 EQQHDVGRLPC-------
MAB_3301|M.abscessus_ATCC_1997 QSGGDRTYRRHDNLATAS
.