For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSTRGQRILLWTTPAAGALFAVACLLFPVFSPPLSPAMPPEEVAAFFRTNVTGILGVVILCNLIAGSLVP LFAVAAVQISRTATSSSVFTYAYIMCVGVSITAFILADYCWGVAAFRPERDPQLISLLNDMAWFFFIAPV GSIAVQNLCLALSIYLDARPDPIFPRWVAHFNIAIAALLIPGAFSILYKSGPLAWDGAVSFTLRLLVFAT YIVVMFLVLLRIVNRQGSEREVLA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0817 | - | - | 100% (234) | hypothetical protein Mvan_0817 |
M. vanbaalenii PYR-1 | Mvan_4933 | - | 1e-31 | 34.07% (226) | hypothetical protein Mvan_4933 |
M. vanbaalenii PYR-1 | Mvan_0818 | - | 1e-19 | 24.11% (224) | hypothetical protein Mvan_0818 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4573 | - | 1e-103 | 76.62% (231) | hypothetical protein Mflv_4573 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2768 | - | 1e-22 | 26.70% (221) | hypothetical protein MAB_2768 |
M. marinum M | MMAR_4698 | - | 5e-54 | 47.16% (229) | hypothetical protein MMAR_4698 |
M. avium 104 | MAV_0960 | - | 5e-53 | 44.49% (227) | hypothetical protein MAV_0960 |
M. smegmatis MC2 155 | MSMEG_6528 | - | 1e-52 | 43.35% (233) | hypothetical protein MSMEG_6528 |
M. thermoresistible (build 8) | TH_1790 | - | 2e-56 | 45.22% (230) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_0817|M.vanbaalenii_PYR-1 -----------------MSTRGQRILLWTTPAAGALFAVACLLFPVFSPP Mflv_4573|M.gilvum_PYR-GCK --MTTTTAAP----SAAMNTRGQRILLWTVPPAAALFVLAYFLFPVFSAP MSMEG_6528|M.smegmatis_MC2_155 --MQILEQAQ-DLPTAGN-IKAQWVSLWTGPAVGLVLLAAFVAFPGFRPP TH_1790|M.thermoresistible__bu VPVQILEEVQ-DSPKAGN-IKAQWVSLWTGPAVGLVLLTALVSFPGFWPP MMAR_4698|M.marinum_M --MGEVGESQVDARGVRRRTDGELILLWTLPAASVIWIAAFLLFPGFLPP MAV_0960|M.avium_104 --MSDVDGG--HARGPRR-VDGELILFWTLPVALVLWIASFFLFPGFNPP MAB_2768|M.abscessus_ATCC_1997 ----------------MQNRMLERASAWSGLFYLLLFGTGWLLVARFMPP : *: : . . .. * .* Mvan_0817|M.vanbaalenii_PYR-1 LSPAMPPEEVAAFF--RTNVTGILGVVILCNLIAGSLVPLFAVAAVQISR Mflv_4573|M.gilvum_PYR-GCK LSPTMTPEQVAAFF--ADNVTGILGVAILCNLIACSLVPLFAVTAVQISR MSMEG_6528|M.smegmatis_MC2_155 MPPDLPADQVAAFY--AENTAWMRFSQVTFNLCGILVLPFFMVIAVQMKR TH_1790|M.thermoresistible__bu MSPLLSPDQVAAFY--AENTAWIRFSQVTFNLCGIMVLPFFMVIVVQMKR MMAR_4698|M.marinum_M MSPTMPAERVAAFYRDPANLPRIRYSMILFNWFGVCLIPILILLVLQIRR MAV_0960|M.avium_104 MSPSLPADQVAAFYRDPAHLPEIRYSMILFNWFGVCLVPILTLIVLQIRR MAB_2768|M.abscessus_ATCC_1997 IPPSAGPAQVASQF--AQRHAWLMLAAVLMMCSTFALFPVSALLVLIARR :.* . .**: : . . : : :.*. : .: * Mvan_0817|M.vanbaalenii_PYR-1 TATSSSVFTYAYIMCVGVSITAFILADYCWGVAAFRPERDPQLISLLNDM Mflv_4573|M.gilvum_PYR-GCK IGTSSNVFTYAYMLCVGVGLTAFILADYCWAMAAFRTDRDPQLISLLNDM MSMEG_6528|M.smegmatis_MC2_155 MANQTHIFAYCYLTAVVSGATTFALSNILFLVAAFRPGRNPELVMLLNDL TH_1790|M.thermoresistible__bu MRTQSHVFAYCYLTAVVSGATIFALSNIFFLVAAFRPDRSPELIQVLNDL MMAR_4698|M.marinum_M MAHRTPIFSYCMLGCVAGGPTLFLIANVCWLLASFRPERDPQLTQLLNDF MAV_0960|M.avium_104 MAHRTPIFSYAMLGCAAGGPTLFLVANVCWLLAAFRPERSPELTQLLNDF MAB_2768|M.abscessus_ATCC_1997 IERQVGMVTVMMGLTLATYLVMNFYTPFSFGIAAFRTERDPALVQYASDY :.: . : : :*:**. *.* * .* Mvan_0817|M.vanbaalenii_PYR-1 AWFFFIAPVGSIAVQNLCLALSIYLDAR--PDPIFPRWVAHFNIAIAALL Mflv_4573|M.gilvum_PYR-GCK AWFFFIAPVGTIVVANLCLAVSIYLDAR--PEPVFARWVAHFNVATAVLL MSMEG_6528|M.smegmatis_MC2_155 AWIVFIAPIGMVVSQFVMLALAVYFDTKGHGEPILPRWVGHFSLATAVVM TH_1790|M.thermoresistible__bu AWIVFIAPIGMVLAQFILLALAVYFDAG--PEPVFPRWVGHYSLATGLAM MMAR_4698|M.marinum_M AWITFTTVVPFLIGQSVILALAIYFDDP--AHPVLGRWVAHFNIVVAAAL MAV_0960|M.avium_104 GWITFTIVVPFLIGQSVILALAIYFDGQ--PRPVFPRWVAHFNLLVAAAL MAB_2768|M.abscessus_ATCC_1997 GFLQFMGGIPMFLMVWLLSAYAILVLSPR-HDPVVPRWFGYLNLWIAILY .:: * : . : * :: . *:. **..: .: . Mvan_0817|M.vanbaalenii_PYR-1 IPGAFSILYKSGPLAWDGAVSFTLRLLVFATYIVVMFLVLLRIVNRQGSE Mflv_4573|M.gilvum_PYR-GCK VPSAFSLLYKSGPLAWDGAVSFDLRMIVLAVYVAVMFVVLVGVVNRQGAE MSMEG_6528|M.smegmatis_MC2_155 IPAAGAAVFHSGPLAWDGFLSFWMRNGAFAVFVVVMFFVLRRAVIRQAVA TH_1790|M.thermoresistible__bu IPSAGAAVFQSGPLAWDGLLTFWLRNAAFAAFVVVMFFVLRRAVLRQAET MMAR_4698|M.marinum_M TPAAFVGLALTGPLAWDGALSFWLKNIAIVVWIVVMGVVLGRCLYREQAQ MAV_0960|M.avium_104 VPAAFVGVSLTGPLAWDGLLSFWVKNVAIAVWIVVMGVVLGRAIYRERAE MAB_2768|M.abscessus_ATCC_1997 LPELLVFFFHSGPFAWNGVVGFWIPAILFIVYFAISPVILIPLVRKLIAE * . :**:**:* : * : : .:..: .:* : : Mvan_0817|M.vanbaalenii_PYR-1 REVLA------- Mflv_4573|M.gilvum_PYR-GCK RDETV------- MSMEG_6528|M.smegmatis_MC2_155 EGVVAG------ TH_1790|M.thermoresistible__bu DGVLR------- MMAR_4698|M.marinum_M CRQ--------- MAV_0960|M.avium_104 NTGRADELVSA- MAB_2768|M.abscessus_ATCC_1997 STETAVTPVRIS