For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KRWVSALRLEATLQVRQRFVHAAVISGMLWLVVLLPMPQHLRSIVEPYVLIGDITIVGFFFIGGAVFFEK QERTLGAVICSPLRFIEYLSVKILVLTGVSLFIAVVVTLATHGTDFRPGFLVAGVVLGTLVMLLVGFISA LPFDSVSDWFLSTVVPLLILSLPVMYMLGVWTNPAFYLVPTQGPLLMFLAVFDQVSLAPWQVGYAVLYPL ICAAGLYRLARVMFGRYVVERSGVA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0775 | - | - | 100% (236) | putative antibiotic-transport integral membrane leucine and valine rich protein ABC transporter |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2706c | - | 1e-89 | 65.68% (236) | antibiotic ABC transporter transmembrane protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2687c | - | 1e-89 | 65.68% (236) | antibiotic ABC transporter transmembrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1859 | - | 2e-78 | 59.40% (234) | antibiotic ABC transporter membrane protein |
M. marinum M | MMAR_2027 | - | 5e-81 | 60.26% (234) | antibiotic-transport integral membrane leucine and valine rich |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_1503 | - | 7e-83 | 61.02% (236) | antibiotic ABC transporter transmembrane protein |
M. thermoresistible (build 8) | TH_1291 | cydB | 4e-06 | 26.00% (200) | Probable integral membrane cytochrome D ubiquinol oxidase |
M. ulcerans Agy99 | MUL_3325 | - | 8e-72 | 61.35% (207) | antibiotic-transport integral membrane leucine and valine rich |
CLUSTAL 2.0.9 multiple sequence alignment Mb2706c|M.bovis_AF2122/97 MTRLVPALRLELTLQVRQKFLHAAVFSGLIWLAVLLPMPVSLRPVAEP-- Rv2687c|M.tuberculosis_H37Rv MTRLVPALRLELTLQVRQKFLHAAVFSGLIWLAVLLPMPVSLRPVAEP-- MSMEG_1503|M.smegmatis_MC2_155 MTRLWAALRLELTVQTRQKFLHAAVFSGLIWLAVLLPLPHSVRPVVEP-- MMAR_2027|M.marinum_M MSRLSTALRLELTLQNRQRFLHAAVFSGLIWLAVLLPMPADLRSVAEP-- MUL_3325|M.ulcerans_Agy99 MSRLSTALRLELTLQNRQRFLHAAVFSGLIWLAVLLPMPADLRSVAEP-- MAB_1859|M.abscessus_ATCC_1997 MNRFSQALRLELTLQVRQKFLHAAVFSGFIWLAVLLPMSRSLRSAAEP-- Mvan_0775|M.vanbaalenii_PYR-1 MKRWVSALRLEATLQVRQRFVHAAVISGMLWLVVLLPMPQHLRSIVEP-- TH_1291|M.thermoresistible__bu --VISVGLQELWFILIAALFLGFLVLEGFDFGVGMLMGPLGAAGEGDPEP .*: : *: *:.*: : . :* . :* Mb2706c|M.bovis_AF2122/97 ------------------YVLVGDIAIIGFFFVGGTVFFEKQERTIGAIV Rv2687c|M.tuberculosis_H37Rv ------------------YVLVGDIAIIGFFFVGGTVFFEKQERTIGAIV MSMEG_1503|M.smegmatis_MC2_155 ------------------YVLIGDVAIIGFFFIGGAVFFEKQERTLGAII MMAR_2027|M.marinum_M ------------------YVLSGDITIIGFFFVAGTVFFEKQERTLSAVI MUL_3325|M.ulcerans_Agy99 ------------------YVLSGDITIIGFFFAAGTVFFEKQERTLSAVI MAB_1859|M.abscessus_ATCC_1997 ------------------YILIGDISIIGFFFIAGTVFFEKQEHTLGAVI Mvan_0775|M.vanbaalenii_PYR-1 ------------------YVLIGDITIVGFFFIGGAVFFEKQERTLGAVI TH_1291|M.thermoresistible__bu RRRAVLNTIGPVWDANEVWLITAGASMFAAFPNWYATLFSALYLPLLAIL ::: .. ::.. * :.:*. .: *:: Mb2706c|M.bovis_AF2122/97 S------------------------------------------------- Rv2687c|M.tuberculosis_H37Rv S------------------------------------------------- MSMEG_1503|M.smegmatis_MC2_155 S------------------------------------------------- MMAR_2027|M.marinum_M A------------------------------------------------- MUL_3325|M.ulcerans_Agy99 A------------------------------------------------- MAB_1859|M.abscessus_ATCC_1997 C------------------------------------------------- Mvan_0775|M.vanbaalenii_PYR-1 C------------------------------------------------- TH_1291|M.thermoresistible__bu FGMIVRIVGIEWRGKIDDERWRKWADAGIAVGSWLPAVLWGVAFAILLRG Mb2706c|M.bovis_AF2122/97 -------------TPLRFWEYLAAKLTVLLAISLFVAVVVATIVHGLGYH Rv2687c|M.tuberculosis_H37Rv -------------TPLRFWEYLAAKLTVLLAISLFVAVVVATIVHGLGYH MSMEG_1503|M.smegmatis_MC2_155 -------------TPLRFAEYLTAKLTVLAAISLFVAVVVATITHGLTYH MMAR_2027|M.marinum_M -------------TPLRFGEYLAAKLAVLLMVSVGVAVVVATIAHGLSYS MUL_3325|M.ulcerans_Agy99 -------------TPLRFGEYLAAKLAVLLMVSVGVAVVVATIAHGFSYS MAB_1859|M.abscessus_ATCC_1997 -------------TPLRFREYLSAKLVVLLAISLVVGVGVSTVANGFHYR Mvan_0775|M.vanbaalenii_PYR-1 -------------SPLRFIEYLSVKILVLTGVSLFIAVVVTLATHGTDFR TH_1291|M.thermoresistible__bu LPIDADGRAHPGLTDVLNGYTLLGGLATASLFAFYGAVFVALKTAGSVRA : : * : . .:. .* *: . * Mb2706c|M.bovis_AF2122/97 LLPLVAGIVLGTLLMLLVGFSSSLPFASVTDWFLAAV-IPLAIMLAPPVV Rv2687c|M.tuberculosis_H37Rv LLPLVAGIVLGTLLMLLVGFSSSLPFASVTDWFLAAV-IPLAIMLAPPVV MSMEG_1503|M.smegmatis_MC2_155 AAALIGGVLLGTLLMLVVGFISSLPFASVSDWAMATV-IPLAVMLVPPIL MMAR_2027|M.marinum_M AAPMIVAVALGTLLMLLVGFISSLPFASISDWFLVAT-IPLAVMNLP-VL MUL_3325|M.ulcerans_Agy99 AAPMIVAVALGTLLMLLVGFISSLPFASISDWFLVAT-IPLAVMNLP-VL MAB_1859|M.abscessus_ATCC_1997 PLPLLVGVVLGSLLMLLSGFLTSLPFASISDWFLAAT-IPLAILTLP-IL Mvan_0775|M.vanbaalenii_PYR-1 PGFLVAGVVLGTLVMLLVGFISALPFDSVSDWFLSTV-VPLLILSLP-VM TH_1291|M.thermoresistible__bu DAFRFAKWLSAPVIVLAGGFGLWTQLAHGTDWTWVALGVAVVALLVAVGL . ..:::* ** : :** : :.: : . : Mb2706c|M.bovis_AF2122/97 HYSG---LWPNPVLYLIPTQGPLLLLGAAFD------------------- Rv2687c|M.tuberculosis_H37Rv HYSG---LWPNPVLYLIPTQGPLLLLGAAFD------------------- MSMEG_1503|M.smegmatis_MC2_155 HYSG---VWTHPVLYAAPMQGPMLLLGAAFD------------------- MMAR_2027|M.marinum_M YYSG---VWPHPVLYAIPTQGPLLLLGAAFG------------------- MUL_3325|M.ulcerans_Agy99 YYSG---VWPHPVLYAIPTQGPLLLLGAAFG------------------- MAB_1859|M.abscessus_ATCC_1997 GFSG---LWNTPGLYVVPTYGPLLLFGAAFG------------------- Mvan_0775|M.vanbaalenii_PYR-1 YMLG---VWTNPAFYLVPTQGPLLMFLAVFD------------------- TH_1291|M.thermoresistible__bu MWAGRREGWAFFNTVVVITAVTVLIFGAMYPNLLPSTLNPEWSVTIYNGS * * .:*:: * : Mb2706c|M.bovis_AF2122/97 ----QVSLAPWQVGYAVVYPIVCAAGLCRAAKALFGRYVVQRSGVL-- Rv2687c|M.tuberculosis_H37Rv ----QVSLAPWQVGYAVVYPIVCAAGLCRAAKALFGRYVVQRSGVL-- MSMEG_1503|M.smegmatis_MC2_155 ----QSVLNAWQIGYAVAYPLACLAGLWWAAHAMFDHYVVERSGVL-- MMAR_2027|M.marinum_M ----QLTLAPWQIGYALLYPSVCVGVLYRVAEASFARYVVAAAGSW-- MUL_3325|M.ulcerans_Agy99 ----QLTLAPWQIGYALF---VSVGVCRGAVSSG-------------- MAB_1859|M.abscessus_ATCC_1997 ----QVELTPWLAVYAVGYPVLGIAGLSWLCKIAFGKYVVAQSGGMS- Mvan_0775|M.vanbaalenii_PYR-1 ----QVSLAPWQVGYAVLYPLICAAGLYRLARVMFGRYVVERSGVA-- TH_1291|M.thermoresistible__bu STPYTLQIMSWAALTLLPLVLGYQAWTYWVFRKRISTDAIPPPIGLPR : .* : .