For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
IGSIVKTPQIVSAQDWDTARSEMLVREKEFTKARDAMAALRRRMPWTLVEREYRFEGPEGPATLLDLFAG RKQLIVYRAFMDPGVSGWPEHGCVGCSLMADHIPNLSHLNARDTTLVYTSRAPQADLARIQRQMGWNIPW YTMVPGDGNWFDADFGVDEWHGTNAFIRLDGQVFRTYFVDGRGDEAFVNTWNFLDITALGRQEKWEDSPP GYPQTAPYQWWRHHDSYDTAESCGGHCADR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0692 | - | - | 100% (241) | protein of unknown function DUF899, thioredoxin family protein |
M. vanbaalenii PYR-1 | Mvan_4382 | - | 4e-54 | 47.32% (224) | protein of unknown function DUF899, thioredoxin family protein |
M. vanbaalenii PYR-1 | Mvan_2972 | - | 2e-30 | 33.92% (227) | protein of unknown function DUF899, thioredoxin family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2284 | - | 2e-56 | 48.66% (224) | protein of unknown function DUF899, thioredoxin family protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2013c | - | 2e-95 | 69.16% (227) | hypothetical protein MAB_2013c |
M. marinum M | MMAR_2919 | - | 1e-27 | 33.80% (216) | hypothetical protein MMAR_2919 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_4966 | - | 4e-54 | 46.93% (228) | CalU12 protein |
M. thermoresistible (build 8) | TH_0930 | arcA | 1e-14 | 32.89% (152) | PROBABLE ARGININE DEIMINASE ARCA (ADI) (AD) (ARGININE |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_0692|M.vanbaalenii_PYR-1 -----------------------MIGSIVKTPQIVSAQDWDTARSEMLVR MAB_2013c|M.abscessus_ATCC_199 ----------------------------MKTPAIVSAQEWETAHRAMLVE Mflv_2284|M.gilvum_PYR-GCK ------------------------MEPAKALPPVVSRAEWEAARAELLVR MSMEG_4966|M.smegmatis_MC2_155 --------------------------MTSGLPPIVSRAEWEARRAELLVR MMAR_2919|M.marinum_M ---------------------MAKALPAS-----VDHLTWRAALDELRER TH_0930|M.thermoresistible__bu LGLDSEVGRLRVIIVHRPGAELMRLTPQNSDALLFDGLPWVSKAQEEHDE .. * : . Mvan_0692|M.vanbaalenii_PYR-1 EKEFTKAR-----------------------DAMAALR--RRMPWTLVER MAB_2013c|M.abscessus_ATCC_199 EKALTRAR-----------------------DALAAKR--RRMPWTEVDT Mflv_2284|M.gilvum_PYR-GCK EKELFRLK-----------------------DAVSAAR--RRLPMVAVDT MSMEG_4966|M.smegmatis_MC2_155 EKELTRLK-----------------------DAVSAAR--RRMPMVDITE MMAR_2919|M.marinum_M EKAATR-----------------------ELDAIAAQR--RRL------- TH_0930|M.thermoresistible__bu FTALLRSRGVEVLLLADLLTEALGHSGAARMHGIGAAVDPRRLGIPLSQE . : ..:.* **: Mvan_0692|M.vanbaalenii_PYR-1 E------------------------------------------------- MAB_2013c|M.abscessus_ATCC_199 S------------------------------------------------- Mflv_2284|M.gilvum_PYR-GCK P------------------------------------------------- MSMEG_4966|M.smegmatis_MC2_155 KA------------------------------------------------ MMAR_2919|M.marinum_M -------------------------------------------------- TH_0930|M.thermoresistible__bu LSSYLRTLEPAELAHVLIAGMTFDELPFGPGELSLVRRMHHGGDFVIEPL Mvan_0692|M.vanbaalenii_PYR-1 ---------------------YRFEGPEGPATLLDLFAGR---------- MAB_2013c|M.abscessus_ATCC_199 ---------------------YRFEGPDGAVSLLDLFQGR---------- Mflv_2284|M.gilvum_PYR-GCK ---------------------YTFDTEAGPLTLLDLFDGR---------- MSMEG_4966|M.smegmatis_MC2_155 ------------------AGDYVFDTETGPVSLLDLFDGR---------- MMAR_2919|M.marinum_M --------------PMVRLADYTLIGADGPVRLVDVFDGR---------- TH_0930|M.thermoresistible__bu PNLVFTRDSSFWIGPRVAITSLALPARSRETSLTDVIYAHHPRFLGVRRA : * *:: .: Mvan_0692|M.vanbaalenii_PYR-1 ----------KQLIVYRAFMDPGVSGWPEHGCVGCSLMADHIPNLSHLNA MAB_2013c|M.abscessus_ATCC_199 ----------RQLIVYRAFVDPGTGDWPEHGCIGCSLMADHIGNLAHLNA Mflv_2284|M.gilvum_PYR-GCK ----------SQLIVQHFMFGS---DWDEG-CSGCSMMADHIGPLSHLYA MSMEG_4966|M.smegmatis_MC2_155 ----------RQLIVQHFMFHP---DWAEG-CVGCSMMADHVGPLSHLHA MMAR_2919|M.marinum_M ----------AQLIVYHHMWTDG----AEWQCGGCTGFTSQFTRLEFLAH TH_0930|M.thermoresistible__bu YESRSAPVEGGDVLLXXHMWADG----AEWQCGGCTWFTSQFTRLEFLDN :::: : * * **: ::.:. * .* Mvan_0692|M.vanbaalenii_PYR-1 RDTTLVYTSRAPQADLARIQRQMGWNIPWYTMVPGDGNW-FDADFGVDEW MAB_2013c|M.abscessus_ATCC_199 RDTTLVYVSRGRQTDLQRIKTRMGWQIPWYTMVPESS---FDRDFGVQDW Mflv_2284|M.gilvum_PYR-GCK KDTSLVLVSRAPVGKLVAFKDRMGWDLPWVSSGRSTFNEDFHTTVDGEEH MSMEG_4966|M.smegmatis_MC2_155 KDTSFALVSRAPVGALLAFRDRMGWDLPWVSSGATTFNEDFHVTVDDEEH MMAR_2919|M.marinum_M YDARFVIVTTGPINDALAYKHKVGNRMPWYSSSESSFAADLDAPAGGG-- TH_0930|M.thermoresistible__bu YDARFVVVTNGPIDEALAYREKVGNRMAWYSSADSPFGADVDAPPGGG-- *: :. .: . : ::* :.* : .. . Mvan_0692|M.vanbaalenii_PYR-1 HGTNAFIR-----LDGQVFRTYFVDGRGDEAFVNTWNFLDITALGRQEKW MAB_2013c|M.abscessus_ATCC_199 HGHNAFIR-----DRDRVYRTYFINNRGDEAFNNTWTFLDMTALGRQETW Mflv_2284|M.gilvum_PYR-GCK HSISAFLR-----DGDRVFHTWQTFDRGEEPFMMVFDLLDLTAYGRQESW MSMEG_4966|M.smegmatis_MC2_155 HGISVFLR-----DGQRVFHTYSTYRRGEEPFMVVFDLLDLTPYGRQETW MMAR_2919|M.marinum_M FAVNVLLR----DG-DTVYRTWHTTGRGTEQLSYMFGLIDLLPWGRQEQW TH_0930|M.thermoresistible__bu FAVNVFLRATAADGTDAVFRTWHTDGRGTEQLSHVFALLDILPWGRQEEW .. ..::* *::*: ** * : : ::*: . **** * Mvan_0692|M.vanbaalenii_PYR-1 EDSPPGYPQTAPYQWWRHHDSYDTAES---CGGHCADR----------- MAB_2013c|M.abscessus_ATCC_199 EDSPEGYPQSPAYEWWDWHDQYGTHEPSRWFGEPDPDDPYDPRPTKACH Mflv_2284|M.gilvum_PYR-GCK EDSPPGWPQRPPYEWFRLHDAY--------------------------- MSMEG_4966|M.smegmatis_MC2_155 EDSPQGWPQRPPYEWMRLHDAY--------------------------- MMAR_2919|M.marinum_M QDSPAGWPSRPTYSGWLGSREIALAYGPGDTAGP--------------- TH_0930|M.thermoresistible__bu QDSPDGWPRWPTYSGWPDSPDIARWYGPAPR------------------ :*** *:* ..*.