For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRLVVDLNRCQGYAQCVPLAPEVLKMLGEEALAYDPNPDVSQRQRVLRAAASCPVQAIVVEADPPEDRDS L
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0399 | - | - | 100% (71) | ferredoxin reductase |
M. vanbaalenii PYR-1 | Mvan_1849 | - | 8e-10 | 45.90% (61) | hypothetical protein Mvan_1849 |
M. vanbaalenii PYR-1 | Mvan_0009 | - | 7e-09 | 40.32% (62) | hypothetical protein Mvan_0009 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3533c | fdxD | 5e-05 | 35.00% (60) | ferredoxin FdxD |
M. gilvum PYR-GCK | Mflv_2417 | - | 3e-05 | 34.92% (63) | putative ferredoxin |
M. tuberculosis H37Rv | Rv3503c | fdxD | 5e-05 | 35.00% (60) | ferredoxin FdxD |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2932 | - | 2e-31 | 84.29% (70) | ferredoxin reductase FdxD |
M. avium 104 | MAV_0848 | - | 4e-07 | 41.54% (65) | hypothetical protein MAV_0848 |
M. smegmatis MC2 155 | MSMEG_6694 | - | 7e-11 | 49.18% (61) | hypothetical protein MSMEG_6694 |
M. thermoresistible (build 8) | TH_1940 | fdxD | 5e-05 | 35.00% (60) | PROBABLE FERREDOXIN FDXD |
M. ulcerans Agy99 | MUL_0334 | - | 2e-06 | 36.51% (63) | ferredoxin |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_0399|M.vanbaalenii_PYR-1 -------------------------------MRLVVDLNRCQGYAQCVPL MMAR_2932|M.marinum_M -------------------------------MRLVVDLNKCQGYAQCVPL MSMEG_6694|M.smegmatis_MC2_155 -------------------------------MRVSVDLNRCQDHGQCVIA MAV_0848|M.avium_104 -------------------------------MRVRVDPRLCEAHALCVEI Mb3533c|M.bovis_AF2122/97 -------------------------------MRVIVDRDRCEGNAVCLGI Rv3503c|M.tuberculosis_H37Rv -------------------------------MRVIVDRDRCEGNAVCLGI TH_1940|M.thermoresistible__bu MAMRRGGGPAGRILTIIRGCTDGNREGKEVAMRVEVDRDRCEGNAICVGI Mflv_2417|M.gilvum_PYR-GCK -------------------------------MRVAVDQDKCVSSGQCVLN MUL_0334|M.ulcerans_Agy99 -------------------------------MKVIVDENICASSGNCVMN *:: ** * . *: Mvan_0399|M.vanbaalenii_PYR-1 APEVLKMLGEEALAYDPNPDV--SQRQRVLRAAASCPVQAIVVEAD-PPE MMAR_2932|M.marinum_M APEVFKLVGEEALAYDPNPDD--SQRQRVLRAVASCPVQAIILEVD-PPA MSMEG_6694|M.smegmatis_MC2_155 APSVFSMTDDGVLEYISTPSE--SERFAVEEAADVCPLQAITIED----- MAV_0848|M.avium_104 APEVFR-LDDDTASCADDPAE--SLRHSVQAAVAACPRQAISVLTEQPPY Mb3533c|M.bovis_AF2122/97 APDIFDLDDEDYAVVKTDPIP-VDQEDLAEQAIAECPRAALSRGE----- Rv3503c|M.tuberculosis_H37Rv APDIFDLDDEDYAVVKTDPIP-VDQEDLAEQAIAECPRAALSRGE----- TH_1940|M.thermoresistible__bu SPEIFELDDDDYAVVKLDPIP-AELEQKALQAIDECPRAALNRRD----- Mflv_2417|M.gilvum_PYR-GCK AMEVFDQRDDDGVVELLNPEPGPEYAQQTRNAAAACPAMAIHIEE----- MUL_0334|M.ulcerans_Agy99 APEIFDQRDEDGVVVLLNANPPAELAEGARRAAASCPAMAIKIEE----- : .:: .: . . . * ** *: Mvan_0399|M.vanbaalenii_PYR-1 DRDSL- MMAR_2932|M.marinum_M DRDTK- MSMEG_6694|M.smegmatis_MC2_155 ------ MAV_0848|M.avium_104 APDEGN Mb3533c|M.bovis_AF2122/97 ------ Rv3503c|M.tuberculosis_H37Rv ------ TH_1940|M.thermoresistible__bu ------ Mflv_2417|M.gilvum_PYR-GCK ------ MUL_0334|M.ulcerans_Agy99 ------