For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. vanbaalenii PYR-1 Mvan_0119 (-)

annotation: NAD(P) transhydrogenase, beta subunit
coordinates: 131994 - 133433
length: 479

FTLETAATAAYVVAALLFILALAGLSRHETSRAGNTFGIVGMVVALVATIALALARHIEPLGLALLVGAM
TIGAAIGLWRAKIVEMTGMPELIALLHSFVGLAAVLVGWNGYLHVEGDPGSAEALQLGSEGMLGIHSAEV
VIGVFIGAVTFTGSIVANLKLSARIKSAPLMLPGKNILNVGALVVFIALTVWFVIDPQLWLLVVVTVLAL
ALGWHLVASIGGGDMPVVVSMLNSYSGWAAAAAGFLLGNDLLIVTGALVGSSGAYLSYIMCKAMNRSFIS
VIAGGFGIEAGPAEDKDYGEHREITAEGAAELLASASSVIITPGYGMAVAQAQYGVADLTRKLRDRGVDV
RFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFDGTSVVLVIGANDTVNPAASEDPGSPIAGMP
VLTVWNADNVIVFKRSMASGYAGVQNPLFFRENTQMLFGDAKDRVDAINAALSVAEHV*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_0119--100% (479)NAD(P) transhydrogenase, beta subunit

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0162pntB6e-9642.62% (474) NAD(P) transhydrogenase subunit beta
M. gilvum PYR-GCKMflv_0727-0.094.51% (474) NAD(P) transhydrogenase, beta subunit
M. tuberculosis H37RvRv0157pntB6e-9642.62% (474) NAD(P) transhydrogenase subunit beta
M. leprae Br4923MLBr_02634pntB3e-9442.53% (475) pyridine transhydrogenase subunit beta
M. abscessus ATCC 19977MAB_4577c-3e-9542.92% (473) NAD(P) transhydrogenase, beta subunit PntB
M. marinum MMMAR_0379pntB4e-9743.52% (471) NAD(P) transhydrogenase (subunit beta) PntB
M. avium 104MAV_5140-2e-9342.43% (469) NAD(P) transhydrogenase beta subunit
M. smegmatis MC2 155MSMEG_4108pntB0.089.35% (479) NAD(P) transhydrogenase, beta subunit
M. thermoresistible (build 8)TH_0162pntB1e-10145.20% (469) PROBABLE NAD(P) TRANSHYDROGENASE (SUBUNIT BETA) PNTB
M. ulcerans Agy99MUL_4733pntB4e-9643.31% (471) NAD(P) transhydrogenase (subunit beta) PntB

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_0379|M.marinum_M               -----MNYLVIGLYILAFSLFIYGLMGLTGPKTAVRGNLIAAVGMAIAVA
MUL_4733|M.ulcerans_Agy99           -----MNYLVIGLYILAFSLFIYGLMGLTEPKTAVRGNLIAAVGMAIAVA
MAV_5140|M.avium_104                -----MNYLVIGLYIVSFALFIYGLMGLTGPKTAVRGNLIAAVGMAIAVA
MLBr_02634|M.leprae_Br4923          -----MNYFVIGLYILAFALFITGLMGLTGPRTAVSGNLIAAVGMTIAVA
Mb0162|M.bovis_AF2122/97            ---MNLHYLVEILYIISFSLFIYGLMGLTGPKTAVRGNLIAAAGMTIAVA
Rv0157|M.tuberculosis_H37Rv         ---MNLHYLVEILYIISFSLFIYGLMGLTGPKTAVRGNLIAAAGMTIAVA
TH_0162|M.thermoresistible__bu      -----MNYVVSILYIVSFAMFIYGLMGLTGPKTAVRGNWIAAAGMAVAII
MAB_4577c|M.abscessus_ATCC_199      MSSESLNYIVDVLYIAAFALFIYGLSGLTGPKTAVRGNWIAAVGMGIAVL
Mvan_0119|M.vanbaalenii_PYR-1       --MFTLETAATAAYVVAALLFILALAGLSRHETSRAGNTFGIVGMVVALV
Mflv_0727|M.gilvum_PYR-GCK          --MFTLETAATAAYVVAALLFILALAGLSKHETSRAGNTFGITGMAVALI
MSMEG_4108|M.smegmatis_MC2_155      --MFRLENVATAAYVVAALLFILALAGLSKHETSRAGNTFGIAGMAVALI
                                         :.  .   *: :  :** .* **:  .*:  ** :. .** :*: 

MMAR_0379|M.marinum_M               ATLVKIRHTD----QWVLIIAGLVVGVALGVPPARLTKMTAMPQLVAFFN
MUL_4733|M.ulcerans_Agy99           ATLVKIRHTD----QWVLIIVGLVVGVALGVPPARLTKMTAMPQLVAFFN
MAV_5140|M.avium_104                ATLIKIRHTD----QWVLIIAGLVVGVVLGVPPARYTKMTAMPQLVAFFN
MLBr_02634|M.leprae_Br4923          ATLVKIRHTE----QWVLIIAALVVGIVLGFPPARLTKVTAMPQLVAFFN
Mb0162|M.bovis_AF2122/97            ATLVMIRHTS----QWPLIIAGLVVGVVLGVPPARLTKMTAMPQLVAFFN
Rv0157|M.tuberculosis_H37Rv         ATLVMIRHTS----QWPLIIAGLVVGVVLGVPPARLTKMTAMPQLVAFFN
TH_0162|M.thermoresistible__bu      ATLILIRDTD----NWPLIIAGLLIGVVLGVPPARMTKMTAMPQLVALFN
MAB_4577c|M.abscessus_ATCC_199      ATLIKVSESATT-LDWILIGAGLGIGVVLGIPPALKTKMTAMPQLVALFN
Mvan_0119|M.vanbaalenii_PYR-1       ATIALALARHIEPLGLALLVGAMTIGAAIGLWRAKIVEMTGMPELIALLH
Mflv_0727|M.gilvum_PYR-GCK          ATVALAIARDIEPLGLALLFAAMAIGAAIGLWRAKIVEMTGMPELIALLH
MSMEG_4108|M.smegmatis_MC2_155      ATIVLAIHGRIEPLGLGLLIGAMIIGALIGLWRARVVEMTGMPELIALLH
                                    **:              *:  .: :*  :*.  *  .::*.**:*:*:::

MMAR_0379|M.marinum_M               GVGGGTVALIALSEFIETKG----FSAFQHGESPTVHIVVASLFA-AIIG
MUL_4733|M.ulcerans_Agy99           GVGGGTVALIALSEFIETKG----FSAFQHGESPTVHIVVASLFA-AIIG
MAV_5140|M.avium_104                GVGGGTVALIALSEFIETSG----FSAFQHGESPTVHIVVASLFA-AIIG
MLBr_02634|M.leprae_Br4923          GVGGGTVALIALSEFIETSG----FSEFQHHESPTVHIVVASLFA-AIIG
Mb0162|M.bovis_AF2122/97            GVGGGTVALIALSEFIDTTG----FSAFQHGESPTVHIVVASLFA-AIIG
Rv0157|M.tuberculosis_H37Rv         GVGGGTVALIALSEFIDTTG----FSAFQHGESPTVHIVVASLFA-AIIG
TH_0162|M.thermoresistible__bu      GVGGGTVALIALAEFMDTEG----FSAFKHGEEPTVHIVVGSLFA-AIIG
MAB_4577c|M.abscessus_ATCC_199      GVGGGTVALIAWSEFIETKG----FSEFKPDQSPTVALVVGSLFA-AIIG
Mvan_0119|M.vanbaalenii_PYR-1       SFVGLAAVLVGWNGYLHVEGDPGSAEALQLGSEGMLGIHSAEVVIGVFIG
Mflv_0727|M.gilvum_PYR-GCK          SFVGLAAVLVGWNGYLHVEGDPGGAEAAHLASEGMLGIHSGEVVIGVFIG
MSMEG_4108|M.smegmatis_MC2_155      SFVGLAAVLVGWNGYLHVEHELDGAEAAKLAGEGMSGIHSAEVFIGVFIG
                                    .. * :..*:.   ::..       .  :   .    :  ..:.  .:**

MMAR_0379|M.marinum_M               SISFWGSIIAFGKLQELISG----APIGFGKAQQPVNLLLLVGAVVAAVV
MUL_4733|M.ulcerans_Agy99           SISFWGSIIAFGKLQELISG----APIGFGKAQQPVNLLLLVGAVVAAVV
MAV_5140|M.avium_104                SISFWGSIIAFGKLQEVISG----APIGFGKAQQPINLLLLAGAVAAAVV
MLBr_02634|M.leprae_Br4923          SISFWGSIIAFGKLQETISG----FPIGFGKVQQPINLLLLVGAIVAAVV
Mb0162|M.bovis_AF2122/97            SISFWGSIVAFGKLQEIISG----RPIGLGKAQQPINLLLLAVAVAAAVV
Rv0157|M.tuberculosis_H37Rv         SISFWGSIVAFGKLQEIISG----RPIGLGKAQQPINLLLLAVAVAAAVV
TH_0162|M.thermoresistible__bu      SISFWGSLIAFGKLQEILPG----RPIGFGKVQQPFNILLLIGSVAACVV
MAB_4577c|M.abscessus_ATCC_199      SVSFWGSLVAFAKLQESIPKNVEKRLVASAKLFQASNIVLLLAAVGTAVY
Mvan_0119|M.vanbaalenii_PYR-1       AVTFTGSIVANLKLSARIKS---APLMLPGKNILNVGALVVFIALTVWFV
Mflv_0727|M.gilvum_PYR-GCK          AVTFTGSIVANLKLSAKMKS---APMMLPGKNFLNVGALVVFAALTVWFV
MSMEG_4108|M.smegmatis_MC2_155      AVTFTGSIVANLKLSARIKS---APLMLPGKNLLNIGALIVFAVLTVWFV
                                    :::* **::*  **.  :        :  .*     . :::   : . . 

MMAR_0379|M.marinum_M               IGLDAHPGSGGVSLWWMIGLLAAAGVLGLMVVLPIGGADMPVVISLLNAM
MUL_4733|M.ulcerans_Agy99           IGLDAYPGSGGVSLWWMIGLLAAAGVLGLMVVLPIGGADMPVVISLLNAM
MAV_5140|M.avium_104                IGLHAHPGSGGVSLWWMIGLLAAAGVLGLMVVLPIGGADMPVVISLLNAM
MLBr_02634|M.leprae_Br4923          IGLHAQPGSAGASLWWMIGLLVAAGVLGLMVVLSIGGADMPVVISLLNAM
Mb0162|M.bovis_AF2122/97            IGLHAHPGSGGVALWWMIGLLVAAGVLGLMVVLPIGGADMPVVISMLNAM
Rv0157|M.tuberculosis_H37Rv         IGLHAHPGSGGVALWWMIGLLVAAGVLGLMVVLPIGGADMPVVISMLNAM
TH_0162|M.thermoresistible__bu      IGLDAHPGTGGASLWWMIAVLVLAGVLGLMVVLPIGGADMPVVISMLNAL
MAB_4577c|M.abscessus_ATCC_199      IGLHP-----GLPVWWIVAVLVFAGVMGLFVVFPIGGADMPVVISLLNAM
Mvan_0119|M.vanbaalenii_PYR-1       I---------DPQLWLLVVVTVLALALGWHLVASIGGGDMPVVVSMLNSY
Mflv_0727|M.gilvum_PYR-GCK          I---------DPALWLLIVVTVLALLLGWHLVASIGGGDMPVVVSMLNSY
MSMEG_4108|M.smegmatis_MC2_155      I---------DPQLWLLVVVTVLALLLGWHLVASIGGGDMPVVVSMLNSY
                                    *         .  :* :: : . *  :*  :* .***.*****:*:**: 

MMAR_0379|M.marinum_M               TGLSAAAAGLALNNTAMIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGG
MUL_4733|M.ulcerans_Agy99           TGLSAAAAGLALNNTAMIGAGMIVGASGSILTNLMAKAMNRSIPAIVAGG
MAV_5140|M.avium_104                TGLSAAAAGLALNNTAMIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGG
MLBr_02634|M.leprae_Br4923          TGLSAAATGLALNNTAIIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGG
Mb0162|M.bovis_AF2122/97            TGLSAAAAGLALNNTAMIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGG
Rv0157|M.tuberculosis_H37Rv         TGLSAAAAGLALNNTAMIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGG
TH_0162|M.thermoresistible__bu      TGLSAAAAGMALNNQAMIVAGMLVGASGSILTNLMAKAMNRSIPAIVAGG
MAB_4577c|M.abscessus_ATCC_199      TGLSAAAAGLALNNTAMIVAGMIVGASGSILTNLMAVAMNRSIPAIVFGS
Mvan_0119|M.vanbaalenii_PYR-1       SGWAAAAAGFLLGNDLLIVTGALVGSSGAYLSYIMCKAMNRSFISVIAGG
Mflv_0727|M.gilvum_PYR-GCK          SGWAAAAAGFLLGNDLLIVTGALVGSSGAYLSYIMCKAMNRSFISVIAGG
MSMEG_4108|M.smegmatis_MC2_155      SGWAAAASGFLLGNDLLIITGALVGSSGAYLSYIMCKAMNRSFISVIAGG
                                    :* :***:*: *.*  :* :* :**:**: *: :*. *****: ::: *.

MMAR_0379|M.marinum_M               FGGGGVSPSADGGGDKHVKATSAADAAIQMAYANQVIVVPGYGLAVAQAQ
MUL_4733|M.ulcerans_Agy99           FGGGGVSPSADGGGDKHVKATSAADAAIQMAYANQVIVVPGYGLAVAQAQ
MAV_5140|M.avium_104                FGGGGVAPGGGDGGDKHVKSTSAADAAIQMAYANQVIVVPGYGLAVAQAQ
MLBr_02634|M.leprae_Br4923          FGSGGVAPSRD--GDKQVKSTSAADAAIQMAYANQVIVVPGYGLAVAQAQ
Mb0162|M.bovis_AF2122/97            FGGGGVAPSGG-GDDKHVKATSAADAAIQMAYANQVIVVPGYGLAVAQAQ
Rv0157|M.tuberculosis_H37Rv         FGGGGVAPSGG-GDDKHVKATSAADAAIQMAYANQVIVVPGYGLAVAQAQ
TH_0162|M.thermoresistible__bu      FGGGGGVGGDGDSGEKVVKSTSAADAAIQMAYANQVIIVPGYGLAVAQAQ
MAB_4577c|M.abscessus_ATCC_199      FGGSDAGAAGGAAEQGTVKATSASDAAIQMAYANQVIVVPGYGLAVAQAQ
Mvan_0119|M.vanbaalenii_PYR-1       FG-IEAGPAED-KDYGEHREITAEGAAELLASASSVIITPGYGMAVAQAQ
Mflv_0727|M.gilvum_PYR-GCK          FG-IEAGPAED-KDYGEHREITADGAAELLASASSVIITPGYGMAVAQAQ
MSMEG_4108|M.smegmatis_MC2_155      FG-IEAGPAED-KDYGEHREITAEGAAELLAHADSVIITPGYGMAVAQAQ
                                    **      . .       :  :* .**  :* *..**:.****:******

MMAR_0379|M.marinum_M               HAVKDMASLLEDKGVAVKYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMD
MUL_4733|M.ulcerans_Agy99           HAVKDMASLLEDKGVAVKYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMD
MAV_5140|M.avium_104                HAVKDMAALLEEKGVPVKYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMD
MLBr_02634|M.leprae_Br4923          HVVKDMASLLENKGVPVSYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMD
Mb0162|M.bovis_AF2122/97            HAVKDLATLLEDRGVPVKYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMD
Rv0157|M.tuberculosis_H37Rv         HAVKDLATLLEDRGVPVKYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMD
TH_0162|M.thermoresistible__bu      HAVKDLSTLLESRGVPVKFGIHPVAGRMPGHMNVLLAEAEVDYDAMKDMD
MAB_4577c|M.abscessus_ATCC_199      HTVKEMADLLESKGVEVKYAIHPVAGRMPGHMNVLLAEADVEYDAMKEMD
Mvan_0119|M.vanbaalenii_PYR-1       YGVADLTRKLRDRGVDVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMD
Mflv_0727|M.gilvum_PYR-GCK          YGVADLTRKLRERGVDVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMD
MSMEG_4108|M.smegmatis_MC2_155      YGVADLTRKLRERGVNVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMD
                                    : * :::  *..:** * :.*******:***********.* ** : :**

MMAR_0379|M.marinum_M               DINDEFARTDVAIVIGANDVTNPAARNDASSPIYGMPILNVDKAKSVIVL
MUL_4733|M.ulcerans_Agy99           DINDEFARTDVAIVIGANDVTNPAARNDASSPIYGMPILNVDKAKSVIVL
MAV_5140|M.avium_104                DINDEFARTDVAIVIGANDVTNPAARNEASSPIYGMPILNVDKAKSVIVL
MLBr_02634|M.leprae_Br4923          DINDEFARTDVVIVIGANDVTNPAARNETASPIYGMPILNVDKAKSVIVL
Mb0162|M.bovis_AF2122/97            DINDEFARTDVTIVIGANDVTNPAARNETSSPIYGMPILNVDKSRSVIVL
Rv0157|M.tuberculosis_H37Rv         DINDEFARTDVTIVIGANDVTNPAARNETSSPIYGMPILNVDKSRSVIVL
TH_0162|M.thermoresistible__bu      EINDEFARTDVTVVIGANDVTNPAARNDPSSPIHGMPILNVDQSKSVIVL
MAB_4577c|M.abscessus_ATCC_199      DINGEFNRTDVTIVIGANDVTNPAARNDPSSPIHGMPILNVDESRSVIVL
Mvan_0119|M.vanbaalenii_PYR-1       EINDDFDGTSVVLVIGANDTVNPAASEDPGSPIAGMPVLTVWNADNVIVF
Mflv_0727|M.gilvum_PYR-GCK          EINDDFDGTSVVLVIGANDTVNPAASEDPSSPIAGMPVLTVWNADNVIVF
MSMEG_4108|M.smegmatis_MC2_155      EINDDFDGTSVVLVIGANDTVNPAAAEDPGSPIAGMPVLQVWNADNVIVF
                                    :**.:*  *.*.:******..**** ::..*** ***:* * :: .***:

MMAR_0379|M.marinum_M               KRSMNSGFAGIDNPLFYGEGTTMLFGDAKKSVTEVAEELKAL---
MUL_4733|M.ulcerans_Agy99           KRSMNSGFAGIDNPLFYGEGTTMLFGDAKKSVTEVAEELKAL---
MAV_5140|M.avium_104                KRSMNSGFAGIDNPLFYAEGTTMLFGDAKKSVTEVAEELKAL---
MLBr_02634|M.leprae_Br4923          KRSMNSGFAGIDNRLFYADGTTMLFGDAKQSVTEVTEELKVL---
Mb0162|M.bovis_AF2122/97            KRSMNSGFAGIDNPLFYADGTTMLFGDAKKSVTEVSEELKAL---
Rv0157|M.tuberculosis_H37Rv         KRSMNSGFAGIDNPLFYADGTTMLFGDAKKSVTEVSEELKAL---
TH_0162|M.thermoresistible__bu      KRSMSSGFAGIDNPLFYAEGTTMLFGDAKKSVTEVIEELKAL---
MAB_4577c|M.abscessus_ATCC_199      KRSMSSGYAGIENPLFFQPQTSMLFGDAKKSVSAVIEELKAL---
Mvan_0119|M.vanbaalenii_PYR-1       KRSMASGYAGVQNPLFFRENTQMLFGDAKDRVDAINAALSVAEHV
Mflv_0727|M.gilvum_PYR-GCK          KRSMASGYAGVQNPLFFRENTQMLFGDAKDRVDAINAALSETAKV
MSMEG_4108|M.smegmatis_MC2_155      KRSMASGYAGVQNPLFFRENTQMLFGDARDRVNDILAALPAPERV
                                    **** **:**::* **:   * ******:. *  :   *