For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SDERDGVSSADTDNGTETDDGDNRGQTAVVTRPQRPTGKRSRRAVEADDDADESPETDSSGSGSKDDDGR GPKARKKTSKRPKDQPSRNPIAFVINYLKEVLGELRKVIWPNRKEMIAYTTTVLFFLIFMVAMIGGVDLG LARLITWIFA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_5118 | secE | - | 100% (151) | preprotein translocase subunit SecE |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0657 | secE | 9e-34 | 50.93% (161) | preprotein translocase subunit SecE |
| M. tuberculosis H37Rv | Rv0638 | secE | 9e-34 | 50.93% (161) | preprotein translocase subunit SecE |
| M. leprae Br4923 | MLBr_01907 | secE | 9e-31 | 47.74% (155) | preprotein translocase subunit SecE |
| M. abscessus ATCC 19977 | MAB_3895c | secE | 3e-29 | 45.33% (150) | preprotein translocase subunit SecE |
| M. marinum M | MMAR_0971 | secE | 4e-35 | 47.31% (167) | preprotein translocase (tail-anchored membrane protein), |
| M. avium 104 | MAV_4523 | secE | 4e-35 | 48.68% (152) | preprotein translocase subunit SecE |
| M. smegmatis MC2 155 | MSMEG_1344 | secE | 3e-42 | 57.62% (151) | preprotein translocase subunit SecE |
| M. thermoresistible (build 8) | TH_3296 | - | 2e-34 | 54.49% (156) | PUTATIVE translocase |
| M. ulcerans Agy99 | MUL_0724 | secE | 3e-35 | 47.31% (167) | preprotein translocase subunit SecE |
| M. vanbaalenii PYR-1 | Mvan_1233 | secE | 1e-64 | 80.13% (151) | preprotein translocase subunit SecE |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_5118|M.gilvum_PYR-GCK MSDERDGVSSADTDNG---TETDDGDNRGQTAVVT----RPQRPTGKRSR
Mvan_1233|M.vanbaalenii_PYR-1 MSDERDGVSSADTDSG---GQTDDGD-RGQTAVVT----RPLRPTGKRSR
MSMEG_1344|M.smegmatis_MC2_155 MSDEREGAGSADDTGT---DTDGTGETRGQTAVVT----RPLRPTGKRAR
TH_3296|M.thermoresistible__bu VSDERDPTGSAADPATGDADNDTTASNRGQTAVAA----RPLRPTGKRAR
MMAR_0971|M.marinum_M MSDEGDAANDATSDGG---ATEDDRASGGRTALVTKSAARPQRPTGKRSR
MUL_0724|M.ulcerans_Agy99 MSDEGDAANDATSDGG---ATEDDRASGGRTALVTKSAARPQRPTGKRSR
MAV_4523|M.avium_104 MSDEGDVANDAASDGA---DTTDDRAGGGRTAVVT----RPQRPTGKRSR
MLBr_01907|M.leprae_Br4923 MSDE----RYAASDGG---GTEVGSGTRGRTTVVTKPATRPQRPTGKRSR
Mb0657|M.bovis_AF2122/97 MSDEGDVADEAVADGA---ENADSRGSGGRTALVTKPVVRPQRPTGKRSR
Rv0638|M.tuberculosis_H37Rv MSDEGDVADEAVADGA---ENADSRGSGGRTALVTKPVVRPQRPTGKRSR
MAB_3895c|M.abscessus_ATCC_199 MSDELDEPDIGTADSD-------------RAVTST----KPLRPTGKRTR
:*** . ::. : :* ******:*
Mflv_5118|M.gilvum_PYR-GCK RAV---EADDDADESPETDSSGSGSKDDDGRGP------KARKKTSKRPK
Mvan_1233|M.vanbaalenii_PYR-1 RAG---EAG-DADKAPEADSSGS--KDDDGSGP------KAKKKTAKKPK
MSMEG_1344|M.smegmatis_MC2_155 RGV---AESTDEPETAAEAAAAV---EAGGKAK------KVKKDASGP--
TH_3296|M.thermoresistible__bu RAA---VED----ETAQGATETT---DDGGKNG------KAKTAKGGDR-
MMAR_0971|M.marinum_M QRAT-AAEDADDEQSSTEPQASEEGAKKD-AKKETSKAAKDKKPKTASKP
MUL_0724|M.ulcerans_Agy99 QRAT-AAEDADDEQSSTEPQASEEGAKKD-AKKQTSKAAKDKKPKTASKP
MAV_4523|M.avium_104 QRT---AGDADAEPSDEAEVSAPEKAEKA-KRK---KAAKPKKS------
MLBr_01907|M.leprae_Br4923 QRAA-NASNTGANVEVEESSTQAAIAKEG-KVK------KPKKS------
Mb0657|M.bovis_AF2122/97 SRAAGADADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAKKAS---KP
Rv0638|M.tuberculosis_H37Rv SRAAGADADVDVEEPSTAASEATGVAKDDSTTKAVSKAARAKKAS---KP
MAB_3895c|M.abscessus_ATCC_199 RAD---ATEAVTEGSEASASETGEVKKKAGKKS--------RKPANKKDK
. :.
Mflv_5118|M.gilvum_PYR-GCK DQPSRNPIAFVINYLKEVLGELRKVIWPNRKEMIAYTTTVLFFLIFMVAM
Mvan_1233|M.vanbaalenii_PYR-1 DGPSRNPLVFVINYLKEVVGELRKVIWPNRKEMATYTTVVLLFLVFMVAL
MSMEG_1344|M.smegmatis_MC2_155 ---SRNPIMFVVNYLKQVVAELRKVIWPNRKQMVSYTTVVLVFLVFMVAL
TH_3296|M.thermoresistible__bu ---PRNPFRFVITYLQQVVAELRKVIWPNRKQMSTYTTVVLAFLAFMVAL
MMAR_0971|M.marinum_M AARAASPFVFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLVFLAFMVAL
MUL_0724|M.ulcerans_Agy99 AARAASPFVFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLVFLAFMVAL
MAV_4523|M.avium_104 ADTRANPFVFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVAL
MLBr_01907|M.leprae_Br4923 ADRSANPIVFIYNYLKQVVGEMRKVIWPNRKQMLTYTSVVLAFLAFMVAL
Mb0657|M.bovis_AF2122/97 KARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVAL
Rv0638|M.tuberculosis_H37Rv KARSVNPIAFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVAL
MAB_3895c|M.abscessus_ATCC_199 SGPSRNPLVQLWVFLQQVVAELRKVIWPNRKQMVSYTSVVLVFLVFMVTL
.*: : :*::*:.*:*********:* :**:.** ** ***::
Mflv_5118|M.gilvum_PYR-GCK IGGVDLGLARLITWIFA-
Mvan_1233|M.vanbaalenii_PYR-1 IGGVDLGLGKLVTWIFA-
MSMEG_1344|M.smegmatis_MC2_155 IAGADYGLARLVSLVFGT
TH_3296|M.thermoresistible__bu IAGADWGLAWVISWAFGN
MMAR_0971|M.marinum_M VGSADLGLSKLMLLVFG-
MUL_0724|M.ulcerans_Agy99 VGSADLGLSKLMLLVFG-
MAV_4523|M.avium_104 VGLADFGLTKLVLLVFG-
MLBr_01907|M.leprae_Br4923 VGLADFGLAKLVLLVFG-
Mb0657|M.bovis_AF2122/97 VAGADLGLTKLVMLVFG-
Rv0638|M.tuberculosis_H37Rv VAGADLGLTKLVMLVFG-
MAB_3895c|M.abscessus_ATCC_199 IGVIDLGLARLVMLVFG-
:. * ** :: *.