For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VDEVLARAAIFQDVDPGAVAALCSQLQKVSFPRGHRVFNEGDLGDTLYIITSGRAKIGCTSPDGRESLLT LMGPSDMFGELAIFDPGPRTSSVTALTALHAVMMDRDALRFWIAERPEIAEQLLRVLARRLRRTNDALSD LIFTDVPGRVAKQLLDLARRFGVQQEGSLRVDHGLTQEEIAQLAGSSRETINKALADFVQRGWIEQRGRT TIIHDPARLARRAQQ
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4388 | - | - | 100% (225) | CRP/FNR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_1371 | - | 1e-89 | 72.77% (224) | CRP/FNR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_1915 | - | 1e-08 | 27.56% (127) | cyclic nucleotide-binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3700 | - | 2e-90 | 72.77% (224) | CRP/FNR family transcriptional regulator |
M. tuberculosis H37Rv | Rv3676 | - | 2e-90 | 72.77% (224) | CRP/FNR family transcriptional regulator |
M. leprae Br4923 | MLBr_02302 | - | 1e-91 | 73.66% (224) | putative Crp/Fnr-family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_0416c | - | 1e-90 | 73.21% (224) | Crp/Fnr family transriptional regulator |
M. marinum M | MMAR_5164 | - | 2e-91 | 73.66% (224) | regulatory protein |
M. avium 104 | MAV_0453 | - | 1e-90 | 73.21% (224) | transcriptional regulator, Crp/Fnr family protein |
M. smegmatis MC2 155 | MSMEG_6189 | - | 6e-91 | 74.11% (224) | transcriptional regulator, Crp/Fnr family protein |
M. thermoresistible (build 8) | TH_2129 | - | 1e-91 | 74.55% (224) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY |
M. ulcerans Agy99 | MUL_4250 | - | 5e-91 | 73.21% (224) | regulatory protein |
M. vanbaalenii PYR-1 | Mvan_5435 | - | 2e-90 | 73.21% (224) | CRP/FNR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MLBr_02302|M.leprae_Br4923 MDEILARAGIFQGVEPSAVAALTKQLQPVDFPRGHTVFTEGEPGDRLYII MAV_0453|M.avium_104 MDEILARAGIFQGVEPSAVTALTKQLQPVDFPRGHTVFAEGEPGDRLYII MMAR_5164|M.marinum_M MDEILARAGIFQGVEPGAVAALTKQLQPVDFPRGHTVFAEGEPGDRLYII MUL_4250|M.ulcerans_Agy99 MDEILARAGIFQGVEPGAVAALTKQLQPVDFPRGHTVFAEGEPGDRLYII MAB_0416c|M.abscessus_ATCC_199 MDEILARAGIFQGVEPSAVSALTKQLQPVDFPRGHTVFAEGEPGDRLYII Mvan_5435|M.vanbaalenii_PYR-1 MDEILARAGIFQGVEPSAVSALTKQLQPVDFPRGHTVFAEGEPGDRLYII MSMEG_6189|M.smegmatis_MC2_155 MDEILARAGIFQGVEPTAVAALTKQLQPVDFPRGHTVFAEGEPGDRLYII Mb3700|M.bovis_AF2122/97 MDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYII Rv3676|M.tuberculosis_H37Rv MDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYII TH_2129|M.thermoresistible__bu VDEILARAGIFQGVEPSAVAALTKQLQPVDFPRGHTVFAEGEPGDRLYII Mflv_4388|M.gilvum_PYR-GCK MDEVLARAAIFQDVDPGAVAALCSQLQKVSFPRGHRVFNEGDLGDTLYII :**:****.***.*:* *::** .*** *.***** ** **: ** **** MLBr_02302|M.leprae_Br4923 VSGKVKIGRRSPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVR MAV_0453|M.avium_104 VSGKVKIGRRSPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVR MMAR_5164|M.marinum_M VAGKVKIGRRSPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVR MUL_4250|M.ulcerans_Agy99 VAGKVKIGRRSPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVR MAB_0416c|M.abscessus_ATCC_199 ITGKVKIGRRSPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVR Mvan_5435|M.vanbaalenii_PYR-1 ISGKVKIGRRSPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVR MSMEG_6189|M.smegmatis_MC2_155 ISGKVKIGRRSPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVR Mb3700|M.bovis_AF2122/97 ISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVR Rv3676|M.tuberculosis_H37Rv ISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVR TH_2129|M.thermoresistible__bu ISGKVKIGRRSPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVR Mflv_4388|M.gilvum_PYR-GCK TSGRAKIGCTSPDGRESLLTLMGPSDMFGELAIFDPGPRTSSVTALTALH :*:.*** :*****.***:**********:**********.*::* :: MLBr_02302|M.leprae_Br4923 AVSMDRDALRAWIADRPEIAEQLLRVLARRLRRTNNNLADLIFTDVPGRV MAV_0453|M.avium_104 AVSMDRDALRAWIADRPEIAEQLLRVLARRLRRTNNNLADLIFTDVPGRV MMAR_5164|M.marinum_M AVSMDRDALRAWIADRPEIAEQLLRVLARRLRRTNNNLADLIFTDVPGRV MUL_4250|M.ulcerans_Agy99 AVSMDRDALRAWIADRPEIAEQLLRVLARRLRRTSNNLADLIFTDVPGRV MAB_0416c|M.abscessus_ATCC_199 AVSMDRDALRAWIADRPEIAEQLLRVLARRLRRTNNNLADLIFTDVPGRV Mvan_5435|M.vanbaalenii_PYR-1 AVSMDREALRAWIADRPEIAEQLLRVLARRLRRTNNNLADLIFTDVPGRV MSMEG_6189|M.smegmatis_MC2_155 AVSMDRDALRAWIADRPEIAEQLLRVLARRLRRTNNNLADLIFTDVPGRV Mb3700|M.bovis_AF2122/97 AVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRV Rv3676|M.tuberculosis_H37Rv AVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRV TH_2129|M.thermoresistible__bu AVSMDRDALRGWIKDRPEIAEQLLRVLARRLRRTNNALADLIFTDVPGRV Mflv_4388|M.gilvum_PYR-GCK AVMMDRDALRFWIAERPEIAEQLLRVLARRLRRTNDALSDLIFTDVPGRV ** ***:*** ** :****:**************.: *:*********** MLBr_02302|M.leprae_Br4923 AKQLLQLAQRFGTQEGGAMRVTHDLTQEEIAQLVGASRETVNKALADFAH MAV_0453|M.avium_104 AKQLLQLAQRFGTQEGGAMRVTHDLTQEEIAQLVGASRETVNKALADFAH MMAR_5164|M.marinum_M AKQLLQLAQRFGTQEGGAMRVTHDLTQEEIAQLVGASRETVNKALADFAH MUL_4250|M.ulcerans_Agy99 AKQLLQLAQRFGTQEGGAMRVTHDLTQEEIAQLVGASRETVNKALADFAH MAB_0416c|M.abscessus_ATCC_199 AKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAH Mvan_5435|M.vanbaalenii_PYR-1 AKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAH MSMEG_6189|M.smegmatis_MC2_155 AKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAH Mb3700|M.bovis_AF2122/97 AKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAH Rv3676|M.tuberculosis_H37Rv AKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAH TH_2129|M.thermoresistible__bu AKQLLQLAQRFGTQEGGMLRVTHDLTQEEIAQLVGASRETVNKALADFAQ Mflv_4388|M.gilvum_PYR-GCK AKQLLDLARRFGVQQEGSLRVDHGLTQEEIAQLAGSSRETINKALADFVQ *****:**:***.*: * :** *.*********.*:****:*******.: MLBr_02302|M.leprae_Br4923 RGWIRLDGKSVLISDSERLARRAR- MAV_0453|M.avium_104 RGWIRLEGKSVLISDSERLARRAR- MMAR_5164|M.marinum_M RGWIRLEGKSVLISDSERLARRAR- MUL_4250|M.ulcerans_Agy99 RGWIRLEGKSVLISDSERLARRAR- MAB_0416c|M.abscessus_ATCC_199 RGWIRLEGKSVLISDSERLARRAR- Mvan_5435|M.vanbaalenii_PYR-1 RGWIRLEGKSVLISDSERLARRAR- MSMEG_6189|M.smegmatis_MC2_155 RGWIRLEGKSVLISDSERLARRAR- Mb3700|M.bovis_AF2122/97 RGWIRLEGKSVLISDSERLARRAR- Rv3676|M.tuberculosis_H37Rv RGWIRLEGKSVLISDSERLARRAR- TH_2129|M.thermoresistible__bu RGWIRLEGKSVLISDSERLARRAR- Mflv_4388|M.gilvum_PYR-GCK RGWIEQRGRTTIIHDPARLARRAQQ ****. *::.:* *. ******: