For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TMFEVDGLGSAERAGSGVRVSAEVVHSYDLTVIAADVDGVVASAGGWLCDRVRAGWQVTVLVAAGADTGA LTVLGVRDETLDSAAAALRRPTAAVAVDTRVLTHDDNARTEVLRLLDSGRTEVTVWGTPSPVTSELLSDA RFDTVCHRASAAARAFKAGALRTCGHDATGPSVETFISAGLWYPPDGGDLVPVSGT*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4090 | - | - | 100% (197) | hypothetical protein Mflv_4090 |
M. gilvum PYR-GCK | Mflv_2448 | - | 5e-25 | 46.51% (172) | hypothetical protein Mflv_2448 |
M. gilvum PYR-GCK | Mflv_4089 | - | 4e-19 | 36.36% (165) | hypothetical protein Mflv_4089 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4738 | - | 8e-20 | 44.85% (136) | hypothetical protein MMAR_4738 |
M. avium 104 | MAV_5125 | - | 2e-20 | 43.17% (139) | hypothetical protein MAV_5125 |
M. smegmatis MC2 155 | MSMEG_4830 | - | 4e-21 | 41.04% (173) | hypothetical protein MSMEG_4830 |
M. thermoresistible (build 8) | TH_0257 | - | 1e-22 | 44.25% (174) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_1047 | - | 3e-16 | 40.00% (125) | hypothetical protein MUL_1047 |
M. vanbaalenii PYR-1 | Mvan_2254 | - | 7e-53 | 55.90% (195) | hypothetical protein Mvan_2254 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4830|M.smegmatis_MC2_155 --------------------------MRYRLDVVAPCVIDAVRYAGGWLV TH_0257|M.thermoresistible__bu --------------------------MRYRLDVVAHDVVDVVRNAGGWIV MMAR_4738|M.marinum_M --------------------------MRYRLDVVASTVIDVVRYAGGWLF MAV_5125|M.avium_104 ---MVAPTFDISKSSAARVTRANDEGLRYRLDVVAASAVDVVQSAGGWLY MUL_1047|M.ulcerans_Agy99 ---------------------------------MAASVIDVVQAAGGWLC Mflv_4090|M.gilvum_PYR-GCK MTMFEVDGLGSAERAGSGVRVSAEVVHSYDLTVIAADVDGVVASAGGWLC Mvan_2254|M.vanbaalenii_PYR-1 --MFGVDDLAHFDRKGSGVRISGETLHTYDLRVVAGDVGGVVAAAGGWLC :* . ..* ****: MSMEG_4830|M.smegmatis_MC2_155 DRVMAGWDVTVLIDRDEDVRPLEILGVEAMDLESVLRSWQDRPHPQTVAV TH_0257|M.thermoresistible__bu DRVMAGWDVTVLTEDRADIRPLQILGVATLPLEDVLASWEGRPHPQTVAV MMAR_4738|M.marinum_M DRAMAGWDVTVLVADHLDDRPLHILGAQTLDLECALASVATRPRPQALAA MAV_5125|M.avium_104 DRAMAGWEVTVLLPHGCNTRSLRILGVRAADLDSGLAGLG--QGAAGLAV MUL_1047|M.ulcerans_Agy99 DRVMAGWQVRVLVPGGDDIRPLQILGATAMDLEAGLTGRA--PMGHSLAV Mflv_4090|M.gilvum_PYR-GCK DRVRAGWQVTVLVAAGADTGALTVLGVRDETLDS-AAAALRR-PTAAVAV Mvan_2254|M.vanbaalenii_PYR-1 DRVRAGWKVTVLVPPGHDVRALTILGVGVDAGES-AAEEPGLDSAAAIAV **. ***.* ** : .* :**. : :*. MSMEG_4830|M.smegmatis_MC2_155 AADLLNTDKRVRHGVLGALEQGLTEVTLWGD----ECPADLR--VCPAHH TH_0257|M.thermoresistible__bu AADLFDRDPRVRRGVLGALEQGHTEVTLWGD----RWPAELSDGIGAVQH MMAR_4738|M.marinum_M GADLFGCDPRVRRGVLQAIDHGVTEVTLWGE----SWPAELEASVSRVLH MAV_5125|M.avium_104 SADAFTADARVRDTVLESLHNRLTAVALWGD----GWPLGVSRATTRAQH MUL_1047|M.ulcerans_Agy99 GAAAFAADERVRAKLTEALQCRWTEVALWGQ----GWPLGVDRAIAPVQH Mflv_4090|M.gilvum_PYR-GCK DTRVLTHDDNARTEVLRLLDSGRTEVTVWGTPSPVTSELLSDARFDTVCH Mvan_2254|M.vanbaalenii_PYR-1 DARVLSGDEQLREDVLRLVDAARAEITVWGG----SALFGSDGRFGRVRH : : * . * : :. : :::** . * MSMEG_4830|M.smegmatis_MC2_155 ELSAAARAFKAQALTAANHPDAGSVGSTEAFRTGTMLSRSVPADLITAS- TH_0257|M.thermoresistible__bu QLSAAARAFKAQALAAANDLEADFVTGTETFRSGVMTRLPMVSDLIPAS- MMAR_4738|M.marinum_M PLSAAARTFKAAALAAA-AAAPGAVDGSEIFRSGLVARDSVAADLVPA-- MAV_5125|M.avium_104 LLSGAARRFKGYALAAEGISDGGIAPAESLLCDVCSAADSELVRLD---- MUL_1047|M.ulcerans_Agy99 VLSAAALAFKR--------------------------------------- Mflv_4090|M.gilvum_PYR-GCK RASAAARAFKAGALRTCGHDATGPS--VETFISAGLWYPPDGGDLVPVSG Mvan_2254|M.vanbaalenii_PYR-1 RLSAAARAFKARALEATGQPTPDLA--VEEFVSAALWYPTDGADLVPHQ- *.** ** MSMEG_4830|M.smegmatis_MC2_155 - TH_0257|M.thermoresistible__bu - MMAR_4738|M.marinum_M - MAV_5125|M.avium_104 - MUL_1047|M.ulcerans_Agy99 - Mflv_4090|M.gilvum_PYR-GCK T Mvan_2254|M.vanbaalenii_PYR-1 -