For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AERSTDFRPGLPSQRQVVELLDGEFARAGYDIEDVVIDAATRPPRIVVIADGDRGLDLDAVAELSRLASE QLDTLDTPPYVLEVTSPGVDRPLTEEKHYRRAQGRLAEVTLADGSTLTGRIGAVQNATVALVVREARSNL TVRDIALDAVVKAVVQVEFSPPSPRELELAGVSGKET*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4042 | - | - | 100% (178) | hypothetical protein Mflv_4042 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2867c | - | 7e-53 | 65.66% (166) | hypothetical protein Mb2867c |
| M. tuberculosis H37Rv | Rv2842c | - | 7e-53 | 65.66% (166) | hypothetical protein Rv2842c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3136c | - | 1e-38 | 50.57% (176) | hypothetical protein MAB_3136c |
| M. marinum M | MMAR_1891 | - | 8e-55 | 68.71% (163) | hypothetical protein MMAR_1891 |
| M. avium 104 | MAV_3696 | - | 1e-55 | 68.05% (169) | hypothetical protein MAV_3696 |
| M. smegmatis MC2 155 | MSMEG_2624 | - | 3e-57 | 67.66% (167) | hypothetical protein MSMEG_2624 |
| M. thermoresistible (build 8) | TH_1293 | - | 3e-53 | 62.64% (174) | conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_2119 | - | 4e-54 | 68.10% (163) | hypothetical protein MUL_2119 |
| M. vanbaalenii PYR-1 | Mvan_2311 | - | 2e-74 | 79.66% (177) | hypothetical protein Mvan_2311 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4042|M.gilvum_PYR-GCK --MAERSTDFRPGLPSQRQVVELLDGEFARAGYDIEDVVID---AATRPP
Mvan_2311|M.vanbaalenii_PYR-1 --MAERST----GLPSQRQVVELLDGEFTRAGYDLEDVVID---AASRPP
Mb2867c|M.bovis_AF2122/97 -----MTT----GLPSQRQVIELLGADFACAGYEIEDVVID---ARARPP
Rv2842c|M.tuberculosis_H37Rv -----MTT----GLPSQRQVIELLGADFACAGYEIEDVVID---ARARPP
MMAR_1891|M.marinum_M -----MTT----GLPSQTQVIELLGGEFARAGYEIEDVVID---HRARPP
MUL_2119|M.ulcerans_Agy99 -----MTT----GLPSQTQVIELLGGEFARAGYEIEDVVID---HRARPP
MAV_3696|M.avium_104 -----MTT----GLPSQTQVIELLGGEFARAGYEIEDVVID---AHARPP
TH_1293|M.thermoresistible__bu -------------------VIELLGGEFARAGYDVEDVVIH---ADARPP
MSMEG_2624|M.smegmatis_MC2_155 --MAPDPKLPSADLPSQKQVIELLDGEFARAGYEIDDVVVN---AATRPA
MAB_3136c|M.abscessus_ATCC_199 MPDPLDPSDSSTGLPSDDQVLELLAPEFSRSGVEIESVVVSDGGVAGRPS
*:*** :*: :* :::.**: **.
Mflv_4042|M.gilvum_PYR-GCK RIVVIADGDRGLDLDAVAELSRLASEQLDTLD-----TPPYVLEVTSPGV
Mvan_2311|M.vanbaalenii_PYR-1 RITVVTDSDHGLDLDSVAELSRIASELLDGLD-----SAPYVLEVTSPGV
Mb2867c|M.bovis_AF2122/97 RIAVIADGDAPLDLDTIAALSRRASALLDGLDGANKIRGRYLLEVSSPGV
Rv2842c|M.tuberculosis_H37Rv RIAVIADGDAPLDLDTIAALSRRASALLDGLDGANKIRGRYLLEVSSPGV
MMAR_1891|M.marinum_M RITVVADGDTTLDLDTIAVLSRSASSLLDSLD---NIGDSYVLEVSSPGI
MUL_2119|M.ulcerans_Agy99 RITVVADGDTTLDLDTIAVLSRSASSLLDSLD---NIGDSYVLEVSSPGI
MAV_3696|M.avium_104 RITVIADGDDGLDLDAAATLSRSASALLDKLD---TIEDHYVLEVSSPGV
TH_1293|M.thermoresistible__bu RIIVVADSDDGPDLDAIAELSRLASELLDRIDPDPGGGARYLLEVTTPGV
MSMEG_2624|M.smegmatis_MC2_155 RITIVADGDKGLDLDAVAMLSRLASGLLDTVD---TGDTPYVLEVTSPGV
MAB_3136c|M.abscessus_ATCC_199 RIAVVVDSDTPVDLDAVAGLSRTASALLDEAD---TGWQAYELEITTPGV
** ::.*.* ***: * *** ** ** * * **:::**:
Mflv_4042|M.gilvum_PYR-GCK DRPLTEEKHYRRAQGRLAEVTLADGSTLTGRIGAVQNATVALVVREA---
Mvan_2311|M.vanbaalenii_PYR-1 DRPLTTEKHYRRARGRLAEITLTDGSVLTGRIGGVADGTVGVVVREG---
Mb2867c|M.bovis_AF2122/97 ERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMRAGTVALVIRED---
Rv2842c|M.tuberculosis_H37Rv ERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMRAGTVALVIRED---
MMAR_1891|M.marinum_M DRPLTSEKHFRRARGRKVELTLADGSQLTGRIGALQSGSLDLVVRAG---
MUL_2119|M.ulcerans_Agy99 DRPLTSEKHFRRARGPKVELTLADGSQLTGRIGALQSGSLDLVVRAG---
MAV_3696|M.avium_104 DRPLRTPKHFRRARGRKVDVVLSDNSTVTGRVGETGDDTVALVVRAG---
TH_1293|M.thermoresistible__bu DRPLVHAKHYRRARGRKVEVTLTDGSRLTGRLGELVDDTVRLVVQEGGRS
MSMEG_2624|M.smegmatis_MC2_155 DRPLTTEKHFRRARGRKAELSLADGSSLTARLGGTDGDQVNVVVAQG---
MAB_3136c|M.abscessus_ATCC_199 DRPLTTVAHFRRAHLRLAQIRLTNGEDLLGRIGITHDDGVQVVLRKP---
:*** *:***: .:: *::.. : .*:* : :*:
Mflv_4042|M.gilvum_PYR-GCK ------RSN-LTVRDIALDAVVKAVVQVEFSPPSPRELELAGVS------
Mvan_2311|M.vanbaalenii_PYR-1 ------RSN-LSVREIALNAIAKAVVQVEFSPPSPRELELAGVS------
Mb2867c|M.bovis_AF2122/97 ------RG--WAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMGLAR
Rv2842c|M.tuberculosis_H37Rv ------RG--WAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMGLAR
MMAR_1891|M.marinum_M ------RE--WKVREIPLAEVEKAVVQVEFSPPNPAELELATT---GRAA
MUL_2119|M.ulcerans_Agy99 ------RE--WKVREIPLAEVEKAVVQVEFSPPNPAELELATT---GRAA
MAV_3696|M.avium_104 ------RD--WAIREIPLGDVVKAVVQVEFSPPAQAELELAGVG--GTDK
TH_1293|M.thermoresistible__bu RDAKGGRGR-YAVRELPLSGIAKAVVQVEFSPPDRRELELAGQ------S
MSMEG_2624|M.smegmatis_MC2_155 ------KD--FAVRQIPLREITKAVVQVEFSPPNRRELELAEQT------
MAB_3136c|M.abscessus_ATCC_199 -----IKGTGWTVRDLAFSDIESAVVQVEFNTPNPQELNLAGAA------
: :*::.: : .*******..* **:**
Mflv_4042|M.gilvum_PYR-GCK GKET--
Mvan_2311|M.vanbaalenii_PYR-1 RKEARA
Mb2867c|M.bovis_AF2122/97 GTEAGA
Rv2842c|M.tuberculosis_H37Rv GTEAGA
MMAR_1891|M.marinum_M GTEVEA
MUL_2119|M.ulcerans_Agy99 GTEVEA
MAV_3696|M.avium_104 TEERRK
TH_1293|M.thermoresistible__bu SKEGGA
MSMEG_2624|M.smegmatis_MC2_155 GKGARA
MAB_3136c|M.abscessus_ATCC_199 ETGGGA