For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_3930 (-)

annotation: nucleic acid binding, OB-fold, tRNA/helicase-type
coordinates: 4192298 - 4192708
length: 136

QPQRLSRRSGEAMATAEGYLRRLTRRLTEDPEQLDVDELSNEAANTGAQKAIDCQRGQEVTMIGTLRSVE
CNGKSCAGGVKAELFDGTDSVMLVWLGQRRIPGIESGRTLKVHGRVGKLDNGSKAIYNPHYEIQK*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_3930--100% (136)nucleic acid binding, OB-fold, tRNA/helicase-type

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2713c-2e-5378.33% (120) hypothetical protein Mb2713c
M. tuberculosis H37RvRv2694c-1e-5378.33% (120) hypothetical protein Rv2694c
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2997c-2e-5073.98% (123) hypothetical protein MAB_2997c
M. marinum MMMAR_2020-4e-5882.68% (127) hypothetical protein MMAR_2020
M. avium 104MAV_3585-4e-5380.17% (116) OB-fold nucleic acid binding domain-containing protein
M. smegmatis MC2 155MSMEG_2768-8e-6188.62% (123) OB-fold nucleic acid binding domain-containing protein
M. thermoresistible (build 8)TH_2215-5e-5782.93% (123) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99MUL_3332-6e-5783.33% (120) hypothetical protein MUL_3332
M. vanbaalenii PYR-1Mvan_2470-2e-6595.93% (123) nucleic acid binding, OB-fold, tRNA/helicase-type

CLUSTAL 2.0.9 multiple sequence alignment


Mb2713c|M.bovis_AF2122/97           --------------MGAQGYLRRLTRRLTEDLEQRDVEELSDEVLNAGAQ
Rv2694c|M.tuberculosis_H37Rv        --------------MGAQGYLRRLTRRLTEDLEQRDVEELSDEVLNAGAQ
MMAR_2020|M.marinum_M               ---------MSGEAMGAEGYLRRLTRRLTEDPEQRDVEELSDEVVNTGAQ
MUL_3332|M.ulcerans_Agy99           --------------MGAEGYLRRLTRRLTEDPEQRDVEELSDEVVNTGAQ
MAV_3585|M.avium_104                --------------------MCRLTRRLTEDPEQRDSEELSDEVASTGAQ
MSMEG_2768|M.smegmatis_MC2_155      -------------MATAERYLRRLTRRLTEDPEQLDVEELSEEAAITGAQ
Mvan_2470|M.vanbaalenii_PYR-1       -----MAEGQERPMATAEGYLRRLTRRLTEDPERLDVEELSEEAAGTGAQ
Mflv_3930|M.gilvum_PYR-GCK          MQPQRLSRRSGEAMATAEGYLRRLTRRLTEDPEQLDVDELSNEAANTGAQ
TH_2215|M.thermoresistible__bu      -------------MATAEGYLRRLTRRLTADPEEIDAAELTDEAENTGAQ
MAB_2997c|M.abscessus_ATCC_199      -------------MATTGGYLRRLTRRLTEDLEQVDAEKIGDDAAATGAQ
                                                        : ******* * *. *  :: ::.  :***

Mb2713c|M.bovis_AF2122/97           RAIDCQRGQEVTVVGTLRSVETNGKGCSGGVSAELFDGSDTVTLVWLGQR
Rv2694c|M.tuberculosis_H37Rv        RAIDCQRGQEVTVVGTLRSVETNGKGCSGGVRAELFDGSDTVTLVWLGQR
MMAR_2020|M.marinum_M               RAIDCQRGQEVTMVGTLRSVETNGKGCSGGVRAELFDGSDTVTLVWLGQR
MUL_3332|M.ulcerans_Agy99           RAIDCQRGQEVTMVGTLRSVETNGKGCSGGVRAELFDGSDTVTLVWLGQR
MAV_3585|M.avium_104                RAIDCERGQEVTMVGTLRSVECNGRACAGGVRAELFDGSDTVTLVWLGQR
MSMEG_2768|M.smegmatis_MC2_155      KAIDCQRGQEVTMVGTLRSVECNTKACSGGVKAELFDGTDTVVLVWLGQR
Mvan_2470|M.vanbaalenii_PYR-1       KAIDCQRGQEVTMIGTLRSVECNGKSCAGGVKAELFDGTDTVMLVWLGQR
Mflv_3930|M.gilvum_PYR-GCK          KAIDCQRGQEVTMIGTLRSVECNGKSCAGGVKAELFDGTDSVMLVWLGQR
TH_2215|M.thermoresistible__bu      RAIDCRRGQEVTMIGTLRSVETGGKACAGGVRAELYDGTDSVMLVWLGQR
MAB_2997c|M.abscessus_ATCC_199      RVIDCQRGQEVTMCGTLRTVETNSKGCVAGVKAELFDGTDTVMLVWLGQR
                                    :.***.******: ****:** . :.* .** ***:**:*:* *******

Mb2713c|M.bovis_AF2122/97           RIPGIDTGRTLRVRGRLGKLENGTKAIYNPHYEIQR
Rv2694c|M.tuberculosis_H37Rv        RIPGIDTGRTLRVRGRLGKLENGTKAIYNPHYEIQR
MMAR_2020|M.marinum_M               RIPGIDSGRTLRVRGRLGKLENGSKAIYNPHYEIQR
MUL_3332|M.ulcerans_Agy99           RIPGIDSGRTLRVRGRLGKLENGSKAIYNPHYEIQR
MAV_3585|M.avium_104                RIPGIDSGRTLRVRGRLGKLENGTKAIYNPHYEIQR
MSMEG_2768|M.smegmatis_MC2_155      RIPGIEQGRTLRVHGRVGKLENGAKAIYNPHYEIQK
Mvan_2470|M.vanbaalenii_PYR-1       RIPGIESGRTLKVHGRVGKLDNGSKAIYNPHYEIQK
Mflv_3930|M.gilvum_PYR-GCK          RIPGIESGRTLKVHGRVGKLDNGSKAIYNPHYEIQK
TH_2215|M.thermoresistible__bu      RIPGIEPGRKLRVRGRVGELDNGAKAIYNPHYEIQK
MAB_2997c|M.abscessus_ATCC_199      RIPGIESGRTLLVRGRLGKLENGGKVIHNPYYEIQR
                                    *****: **.* *:**:*:*:** *.*:**:****: