For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GALRPAAVAGAFAAGLATGVLTRSQRNTHAGQDELPESAASAAPEPAEAEKVDAPPADDPAKPESPTDLT RPSWLFVLRKTAREFTHDQCTDLAAALTYYAVLSLFPALVVVMSLLGVIGQSERTADAVLGIVDDVSPGA AVDVLREPIQQLVNAPSAGLTLVLGIVGALWSASGFVGAFGRAMNRIYEVEEGRPGWKLRLQQLFLTLVG LIVAATAALLLAVSGPVAEAVGGYLGVGATGLTVWNIARWPLLLVLVVFGVAMLYYVSPNVRQPKFRWIS VGAAIAIVTWVCASLGFGFYVANFGNYNKTFGTLAGVIVFLLWLWLTNLALLFGAEVDAELERGRQLQAG IRAEDTLKLPLRDTSLIEKNKAKEHETRLRGRVLRRSRGRHDGFGDDPQG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3869 | - | - | 100% (401) | putative ribonuclease BN |
M. gilvum PYR-GCK | Mflv_3945 | - | 2e-12 | 26.33% (281) | ribonuclease BN |
M. gilvum PYR-GCK | Mflv_3865 | - | 2e-09 | 26.74% (258) | ribonuclease BN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2726 | - | 3e-15 | 25.64% (273) | hypothetical protein Mb2726 |
M. tuberculosis H37Rv | Rv2707 | - | 3e-15 | 25.64% (273) | hypothetical protein Rv2707 |
M. leprae Br4923 | MLBr_01017 | - | 3e-14 | 24.64% (276) | hypothetical protein MLBr_01017 |
M. abscessus ATCC 19977 | MAB_3025 | - | 6e-16 | 27.50% (280) | ribonuclease BN |
M. marinum M | MMAR_2006 | - | 2e-17 | 26.41% (284) | hypothetical protein MMAR_2006 |
M. avium 104 | MAV_3600 | - | 6e-16 | 26.86% (283) | hypothetical protein MAV_3600 |
M. smegmatis MC2 155 | MSMEG_2755 | - | 1e-11 | 23.72% (333) | hypothetical protein MSMEG_2755 |
M. thermoresistible (build 8) | TH_1245 | - | 3e-20 | 27.22% (327) | conserved hypothetical proline rich protein |
M. ulcerans Agy99 | MUL_3347 | - | 2e-17 | 26.41% (284) | hypothetical protein MUL_3347 |
M. vanbaalenii PYR-1 | Mvan_2454 | - | 4e-15 | 26.64% (304) | ribonuclease BN |
CLUSTAL 2.0.9 multiple sequence alignment Mb2726|M.bovis_AF2122/97 -------------------------------------------------- Rv2707|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2006|M.marinum_M -------------------------------------------------- MUL_3347|M.ulcerans_Agy99 -------------------------------------------------- MLBr_01017|M.leprae_Br4923 -------------------------------------------------- MAV_3600|M.avium_104 -------------------------------------------------- MSMEG_2755|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_2454|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3025|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1245|M.thermoresistible__bu MPDGIGLSVGATTLAAVVVGRTALTRTPVLTRYPHRPPEVGVPSENPQLT Mflv_3869|M.gilvum_PYR-GCK -------------------------------------------------- Mb2726|M.bovis_AF2122/97 -------------------------------------------------- Rv2707|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2006|M.marinum_M -------------------------------------------------- MUL_3347|M.ulcerans_Agy99 -------------------------------------------------- MLBr_01017|M.leprae_Br4923 -------------------------------------------------- MAV_3600|M.avium_104 -------------------------------------------------- MSMEG_2755|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_2454|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3025|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1245|M.thermoresistible__bu ERGLIITDFVDRVGDPVGIVAPDGSTHPGEAVLADALHALWRTVAPLGSP Mflv_3869|M.gilvum_PYR-GCK -------------------------------------------------- Mb2726|M.bovis_AF2122/97 -------------------------------------------------- Rv2707|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2006|M.marinum_M -------------------------------------------------- MUL_3347|M.ulcerans_Agy99 -------------------------------------------------- MLBr_01017|M.leprae_Br4923 -------------------------------------------------- MAV_3600|M.avium_104 -------------------------------------------------- MSMEG_2755|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_2454|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3025|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1245|M.thermoresistible__bu DDPIGVAHPAHWQPVAVEALRGRLAAQRDQAPVLAQAPLVSDAEAALTAL Mflv_3869|M.gilvum_PYR-GCK -------------------------------------------------- Mb2726|M.bovis_AF2122/97 -------------------------------------------------- Rv2707|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2006|M.marinum_M -------------------------------------------------- MUL_3347|M.ulcerans_Agy99 -------------------------------------------------- MLBr_01017|M.leprae_Br4923 -------------------------------------------------- MAV_3600|M.avium_104 -------------------------------------------------- MSMEG_2755|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_2454|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3025|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1245|M.thermoresistible__bu QADPGLPTSGIVALCDFGGTGTSLTIADAADGYRPVAPTLRHLDLSGELI Mflv_3869|M.gilvum_PYR-GCK -------------------------------------------------- Mb2726|M.bovis_AF2122/97 -------------------------------------------------- Rv2707|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2006|M.marinum_M -------------------------------------------------- MUL_3347|M.ulcerans_Agy99 -------------------------------------------------- MLBr_01017|M.leprae_Br4923 -------------------------------------------------- MAV_3600|M.avium_104 -------------------------------------------------- MSMEG_2755|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_2454|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3025|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1245|M.thermoresistible__bu DQALLRHVLADLTEAGVVDASGTSAIGSLSRLRAQCRTAKERLSTTAVTT Mflv_3869|M.gilvum_PYR-GCK -------------------------------------------------- Mb2726|M.bovis_AF2122/97 -------------------------------------------------- Rv2707|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2006|M.marinum_M -------------------------------------------------- MUL_3347|M.ulcerans_Agy99 -------------------------------------------------- MLBr_01017|M.leprae_Br4923 -------------------------------------------------- MAV_3600|M.avium_104 -------------------------------------------------- MSMEG_2755|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_2454|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3025|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1245|M.thermoresistible__bu LTAEAPGRPHELRLTRDELDAVLRPPLDEFLTAVQYTLDRNGIRPSDLTA Mflv_3869|M.gilvum_PYR-GCK -------------------------------------------------- Mb2726|M.bovis_AF2122/97 -------------------------------------------------- Rv2707|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2006|M.marinum_M -------------------------------------------------- MUL_3347|M.ulcerans_Agy99 -------------------------------------------------- MLBr_01017|M.leprae_Br4923 -------------------------------------------------- MAV_3600|M.avium_104 -------------------------------------------------- MSMEG_2755|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_2454|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3025|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1245|M.thermoresistible__bu VATVGGGARIPLITAALSERFRVPVVTTPQPELTAAIGAGLTAVRALQAG Mflv_3869|M.gilvum_PYR-GCK ----------------------------------MGALRPAAVAGAFAAG Mb2726|M.bovis_AF2122/97 ----------------------------------------------MSDQ Rv2707|M.tuberculosis_H37Rv ----------------------------------------------MSDQ MMAR_2006|M.marinum_M ----------------------------------------------MSDQ MUL_3347|M.ulcerans_Agy99 ----------------------------------------------MSEQ MLBr_01017|M.leprae_Br4923 ----------------------------------------------MSGQ MAV_3600|M.avium_104 ----------------------------------------------MSDQ MSMEG_2755|M.smegmatis_MC2_155 ----------------------------------------------MTGQ Mvan_2454|M.vanbaalenii_PYR-1 ----------------------------------------------MDDQ MAB_3025|M.abscessus_ATCC_1997 ----------------------------------------------MSEK TH_1245|M.thermoresistible__bu PADEATQWAAAVPDQADTQLWDGADQPGSDQLGADPTGAAPALAWSQADD Mflv_3869|M.gilvum_PYR-GCK LATGVLTRSQRNTHAGQDELPESAASAAPEPAEAEKVDAPPADDPAKPES . Mb2726|M.bovis_AF2122/97 VP-------------------KPHRHHIWRITRRTLSKSWDDSIFSESAQ Rv2707|M.tuberculosis_H37Rv VP-------------------KPHRHHIWRITRRTLSKSWDDSIFSESAQ MMAR_2006|M.marinum_M VP-------------------RPSRHHIWRISLRTLSKSWDDSIFSESAQ MUL_3347|M.ulcerans_Agy99 VP-------------------RPSRHHIWRISLRTLSKSWDDSIFSESAQ MLBr_01017|M.leprae_Br4923 VY-------------------KPTRQHIWRISLRTLSKSWDDSIFSESAQ MAV_3600|M.avium_104 VA-------------------KPSRHHIWRITLRTLSKSWDDSIFSESAQ MSMEG_2755|M.smegmatis_MC2_155 P--------L---------PVPPSRHHIRHIAKRTLSKSWDDSIFSESAQ Mvan_2454|M.vanbaalenii_PYR-1 SERPDVRPTQ---------RARPSRHHIRHITIRALSKSWDDSIFSESAQ MAB_3025|M.abscessus_ATCC_1997 PR------------------HVSFGRDVLHVMRRTAVKSWDDSIFAQSAQ TH_1245|M.thermoresistible__bu VPEVSDVYAPXXXXRSLYARCPAPVRHAWRLTDRTVRAASADRVPGLAAE Mflv_3869|M.gilvum_PYR-GCK PT-------------------DLTRPSWLFVLRKTAREFTHDQCTDLAAA : :: * :* Mb2726|M.bovis_AF2122/97 AAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTAHSFFSPS Rv2707|M.tuberculosis_H37Rv AAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTAHSFFSPS MMAR_2006|M.marinum_M AGFWSALSLPPLLLGMLGSLAYVAPLFGQDTLPAIEKTIISMTHRFFSPS MUL_3347|M.ulcerans_Agy99 AGFWSALSLPPLLLGMLGSLAYVAPLFGQDTLPAIEKTIISMTHRFFSPS MLBr_01017|M.leprae_Br4923 AAFWSALSLPPLVLGMLGSLAYVAPLFGEDTLPTIERRVISMAHSFFSPS MAV_3600|M.avium_104 AGFWSALSLPPLLLGLLGTLAYVAPLFGPDMLPSILRQLISTAHSVFSPS MSMEG_2755|M.smegmatis_MC2_155 AAFWCALSLPPLLLGMLGSLAYIAPLFGPETLPTIQNQLITAANSFFSPN Mvan_2454|M.vanbaalenii_PYR-1 AAFWCALSLPPLLLGMLGSLAYVAPLFGPDTLVTIQSQLVSLAGRFFSPN MAB_3025|M.abscessus_ATCC_1997 AAFWQVLSLPPLLLGILGSLTFVGPLFGPDTLPEIQERLVRVANSVFSKS TH_1245|M.thermoresistible__bu AALFTLISLPALLLAVFGSLGYIAEALGPDGTEGLRRLVLDVPQSFLTEE Mflv_3869|M.gilvum_PYR-GCK LTYYAVLSLFPALVVVMSLLGVIG------QSERTADAVLGIVDDVSPGA : :** . :: ::. * :. : . . Mb2726|M.bovis_AF2122/97 VVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQ Rv2707|M.tuberculosis_H37Rv VVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQ MMAR_2006|M.marinum_M VVDEIIEPTIRDITANARGEVVSVGFLISLWAGSSAISSYVDAIVEAHDQ MUL_3347|M.ulcerans_Agy99 VVDEIIEPTIRDITANARGEVVSVGFLISLWAGSSAISSYVDAIVEAHDQ MLBr_01017|M.leprae_Br4923 VVNEIIEPTISDVNNGARGEVVSLGFLISLWAGSSAISAFVDAVVKAHDQ MAV_3600|M.avium_104 VVNEIIEPTVRDIANNARGEVVSLGFLISLWAGSSAISAFVDSVVEAHDQ MSMEG_2755|M.smegmatis_MC2_155 VVNEIIEPTIRDIVKGARGEVVSIGFVISLWAGSSAVSAFVDSIVEAHDQ Mvan_2454|M.vanbaalenii_PYR-1 VVSEIIEPTVRDIVRGARGEVVSLGFVISLWAGSSAISAFVDSITEAHDQ MAB_3025|M.abscessus_ATCC_1997 VVTEIIEPTIIDIMRDGRGEVVSIGFVISLWAGSSAISSFVDSVVEAHDQ TH_1245|M.thermoresistible__bu TFG-FYAVMVEDVLTRRRGSVVSIGLLLSLWTGSRAVNRYLETITIAYGV Mflv_3869|M.gilvum_PYR-GCK AVDVLREPIQQLVNAPSAGLTLVLGIVGALWSASGFVGAFGRAMNRIYEV .. : : * . :*:: :**:.* :. : :: : Mb2726|M.bovis_AF2122/97 TPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVG---PRKVSEHIP---- Rv2707|M.tuberculosis_H37Rv TPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVG---PRKVSEHIP---- MMAR_2006|M.marinum_M TPLRHPVRQRFFALFLYVVGLLFIVISAPVAVMG---PRKVSEHIP---- MUL_3347|M.ulcerans_Agy99 TPLRHPVRQRFFALFLYVVGLLFIVISAPVAVMG---PRKVSEHIP---- MLBr_01017|M.leprae_Br4923 TLLRHPVKQRLFALFLYIAMLAFVVATAPLVVVG---PRKVTKLIP---- MAV_3600|M.avium_104 TPLRHPVRQRFFALFLYVVMLVGVVATAPLVVVG---PRKVGEHIP---- MSMEG_2755|M.smegmatis_MC2_155 TPLRHPVRQRFYALGLYVVMLVGAIAAAPLVALG---PRKIAEQLP---- Mvan_2454|M.vanbaalenii_PYR-1 TPLRHPVRQRFYALGLYVVMLVGAIVAAPFLALG---PRKVAEFIP---- MAB_3025|M.abscessus_ATCC_1997 TPLRHPVRQRFFALGLYVAALAMAVVTLPMVALG---PKRIAEVVP---- TH_1245|M.thermoresistible__bu AP-RPVWRRRLIALGLTAGGLVGAAAVLPPLVVG---PQLVQELAPPAMR Mflv_3869|M.gilvum_PYR-GCK EEGRPGWKLRLQQLFLTLVGLIVAATAALLLAVSGPVAEAVGGYLG--VG * : *: * * * .:. .. : Mb2726|M.bovis_AF2122/97 ESLANLLRYGYYPALILGLTVGVILLYRVALPVPLP-THRLVLGAVLAIA Rv2707|M.tuberculosis_H37Rv ESLANLLRYGYYPALILGLTVGVILLYRVALPVPLP-THRLVLGAVLAIA MMAR_2006|M.marinum_M DNMSNLMHYGYYPALIAVLTVGVIILYRVSLPVPLP-THRLILGAVLAMA MUL_3347|M.ulcerans_Agy99 DSMSNLMHYGYYPALIAVLTVGVIILYRVSLPVPLP-THRLILGAVLAMA MLBr_01017|M.leprae_Br4923 HSWANMLHLGYYPAVIVSLLVAVMILYRVALPIPLP-THRLVFGAILATA MAV_3600|M.avium_104 LGLSNVLRYGYYPALIVGLTIAVMILYRVALPEPLP-SHRLILGAMLATT MSMEG_2755|M.smegmatis_MC2_155 DSWDNALHYGYYPALFFAVALFVTVLYRVSLPEPLP-THRLLLGTVLATV Mvan_2454|M.vanbaalenii_PYR-1 DSWDSALQFAYYPVLFVALVVSVNLLYRVSLPKPLP-SHRLLLGSVLAAA MAB_3025|M.abscessus_ATCC_1997 DSWNSLLRYGYFPLLGIALVALVTLLYRVSLPRPLP-SHRLWIGALLAVT TH_1245|M.thermoresistible__bu AATVQMLDAMFWPALILAILVGLVSFYHFGVPWQTP-WRRDLPGAVLAMV Mflv_3869|M.gilvum_PYR-GCK ATGLTVWNIARWPLLLVLVVFGVAMLYYVSPNVRQPKFRWISVGAAIAIV :* : : : :* .. * : *: :* . Mb2726|M.bovis_AF2122/97 VFLIATLGLRVYLAWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELN Rv2707|M.tuberculosis_H37Rv VFLIATLGLRVYLAWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELN MMAR_2006|M.marinum_M VFLIATLGLRFYLGWITHTGYTYGALSTPIAFLLFAFFGGFAVMIGAELN MUL_3347|M.ulcerans_Agy99 VFLIATLGLRFYLGWITHTGYTYGALSTPIAFLLFAFFGGFAVMIGAELN MLBr_01017|M.leprae_Br4923 VFVITTLGLRIYLKWITGTGYTYGALTTPIAFLLFAFFGGFAIMLGAEFN MAV_3600|M.avium_104 VFVTATLGLRFYLRWITSTGYTYGALSTPIAFLLFAFFGGFAIMLGAELN MSMEG_2755|M.smegmatis_MC2_155 VFLVTTVGLRVYLTWITSTGYTYGALATPIAFLLFAFFLGFAIMIGAELN Mvan_2454|M.vanbaalenii_PYR-1 VFLIATWGLRVYLTWITSTGYTYGALATPIAFLLFAFFLGFAIMIGAELN MAB_3025|M.abscessus_ATCC_1997 FFAIASLGLRFYLNWITGTGYTYGALATPIAFLLFAFMLGFAIVLGAELN TH_1245|M.thermoresistible__bu LWLLASAGLRAYLAVSVRDEAVYAQLAVPIAVVLWLYVTAFAVLVGAEFN Mflv_3869|M.gilvum_PYR-GCK TWVCASLGFGFYVANFGNYNKTFGTLAGVIVFLLWLWLTNLALLFGAEVD : :: *: *: .:. *: *..:*: :. :*::.***.: Mb2726|M.bovis_AF2122/97 AAVQEE------WPAPATHAHRLGNWLKARIGVG----TTTYSSTAQHSA Rv2707|M.tuberculosis_H37Rv AAVQEE------WPAPATHAHRLGNWLKARIGVG----TTTYSSTAQHSA MMAR_2006|M.marinum_M AAIQEE------WPAPATHAHRLRNWLRARTAAA----TGSADSESPQSN MUL_3347|M.ulcerans_Agy99 AAIQEE------WPAPATHAHRLRNWLRARTAAA----TGSADSESPQSN MLBr_01017|M.leprae_Br4923 ASIQEK------FPAPKTHTHRLHNWLTSRLHTDPGRNTVTTQTTQHRSG MAV_3600|M.avium_104 AAVQEE------FPAPKTHAHRLRTWLFSRSPALARTVQTLASPIANPAT MSMEG_2755|M.smegmatis_MC2_155 AAIQEE------WPAADTHATRVRKWIETRTRNG-GAEEPVRD--EPDPV Mvan_2454|M.vanbaalenii_PYR-1 AAIEEE------FPAPDTHAKRFRWWLEAKAESLNGTTSPTAAPGEPRAA MAB_3025|M.abscessus_ATCC_1997 AAIEEN------WPAGATHARQLREWLSPQNGQN-----GRDDGTPTQSP TH_1245|M.thermoresistible__bu AEIERM------WPHDR-YPWRLRRRRDRRSRDG-----------SARMG Mflv_3869|M.gilvum_PYR-GCK AELERGRQLQAGIRAEDTLKLPLRDTSLIEKNKAKEHETRLRGRVLRRSR * ::. . . Mb2726|M.bovis_AF2122/97 VAAE--PPS---- Rv2707|M.tuberculosis_H37Rv VAAE--PPS---- MMAR_2006|M.marinum_M TAVD--PPS---- MUL_3347|M.ulcerans_Agy99 TAVD--PPS---- MLBr_01017|M.leprae_Br4923 RAAELINPS---- MAV_3600|M.avium_104 QRREVAPAEPRG- MSMEG_2755|M.smegmatis_MC2_155 PG---AAEEPSAS Mvan_2454|M.vanbaalenii_PYR-1 AGGPVATSDAATS MAB_3025|M.abscessus_ATCC_1997 EGC---------- TH_1245|M.thermoresistible__bu R------------ Mflv_3869|M.gilvum_PYR-GCK GRHDGFGDDPQG-