For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSRDRGGDRDRPWLLEAVRRRRTVFVDAWRSRLWPVPALGVVFAIVAGVALPELDAALDKRMPETLSAYL FGGGADAAREVLGAIATSLITVTSLTFSLTVVTLQLASTQYTPRLLRTFAADPFVQRTLALFLATFVYAL TVLRTVRNDADAGAEFVPQLSVTVAYLLAMVSVLALVLFLGHLVRQIRIETMLDHVSSDIETTARRMLKR LDDTPDHDYTPFPPTDASVVTARSSGFLVEVDEQALFAAAVEADVVVWIDRPVGSDIVSGVPAALCWSTG PPGDPLSGERLSRLREQVRGALSTGLERTAAQDIGYGLRQLTDVVVRALSPGINDPTTAVHGLNSCSATL CELARYRLGRRTLRDDDGVVRVVLARPDLPDLLDMVCDQPQLYGASDPTVLARLVSMLRELAWVVVVPAH REALSDRLRRMERVVAEQDFDSTDRDRLDRLINHVREALDRRWPAT
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_3804 | - | - | 100% (466) | hypothetical protein Mflv_3804 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1321c | - | 1e-54 | 33.64% (428) | hypothetical protein Mb1321c |
| M. tuberculosis H37Rv | Rv1290c | - | 1e-54 | 33.64% (428) | hypothetical protein Rv1290c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2975 | - | 1e-169 | 65.08% (461) | hypothetical protein MMAR_2975 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0986 | - | 0.0 | 73.28% (464) | hypothetical protein Mvan_0986 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3804|M.gilvum_PYR-GCK --------------MSRDRGGD-----------------------RDRPW
Mvan_0986|M.vanbaalenii_PYR-1 ------------MPMSADGNGR-----------------------HGGSR
MMAR_2975|M.marinum_M --------------MSRGGERN-----------------------SGLRG
Mb1321c|M.bovis_AF2122/97 MLQRSLGVNGRKLAMSARSAKRERKNASTAASKCYVVPPSARGWVHAYSV
Rv1290c|M.tuberculosis_H37Rv MLQRSLGVNGRKLAMSARSAKRERKNASTAASKCYVVPPSARGWVHAYSV
**
Mflv_3804|M.gilvum_PYR-GCK LLEAVRRRRTVFVDAWRSRLWPVPALGVVFAIVAGVALPELDAALDKRMP
Mvan_0986|M.vanbaalenii_PYR-1 ILGTVKQRGAVVVDGLRSRLWPVPALGVVAAVLAGISIPELDSAVDAQLP
MMAR_2975|M.marinum_M FLQALTQRRVAIAEGLRSRLWPTPALGVVMAIAVGLALPEVDSAVDPHMP
Mb1321c|M.bovis_AF2122/97 TATSMLNRRKAILDYLQGAVWVLPTFGVAIGLGSGAVLSMIPVKSG----
Rv1290c|M.tuberculosis_H37Rv TATSMLNRRKAILDYLQGAVWVLPTFGVAIGLGSGAVLSMIPVKSG----
:: .* .. : :. :* *::**. .: * :. : .
Mflv_3804|M.gilvum_PYR-GCK ETLSAYLFGGGADAAREVLGAIATSLITVTSLTFSLTVVTLQLASTQYTP
Mvan_0986|M.vanbaalenii_PYR-1 QTLAGYLFGGGADAAREVLGAIATSLITVTSLTFSLTLVTLQLASSQYTP
MMAR_2975|M.marinum_M PALTSYIFGGGADAARELLSAIATSLVTVTSLTFSLTLITLQLASSQYTP
Mb1321c|M.bovis_AF2122/97 TLIDKLMFQGTPGDARGVLIVVSATMITTIGIVFSLTVLSLQIASSQFSV
Rv1290c|M.tuberculosis_H37Rv TLIDKLMFQGTPGDARGVLIVVSATMITTIGIVFSLTVLSLQIASSQFSV
: :* * .. ** :* .::::::*. .:.****:::**:**:*::
Mflv_3804|M.gilvum_PYR-GCK RLLRTFAADPFVQRTLALFLATFVYALTVLRTVRNDADAGAEFVPQLSVT
Mvan_0986|M.vanbaalenii_PYR-1 RLLRTFAADRFVQRTLALFLATFVYALTVLRTVRNDNDGTAEFVPQIAVT
MMAR_2975|M.marinum_M RLLRTFAADHFVQRTLAVFLATFAYALTVLRSVRNKRGEGAEFVPQIAVT
Mb1321c|M.bovis_AF2122/97 RLLRTFLRDVPNQVVLAIFACTFAYSTGGLHTVGEHRD-GGAFIPKVAVT
Rv1290c|M.tuberculosis_H37Rv RLLRTFLRDVPNQVVLAIFACTFAYSTGGLHTVGEHRD-GGAFIPKVAVT
****** * * .**:* .**.*: *::* :. . . *:*:::**
Mflv_3804|M.gilvum_PYR-GCK VAYLLAMVSVLALVLFLGHLVRQIRIETMLDHVSSDIETTARRMLKRLDD
Mvan_0986|M.vanbaalenii_PYR-1 VAYLLAMASVLALVLFLGHLVRQIRIETMLDHVADDIEQTAGRLLDRIDD
MMAR_2975|M.marinum_M LSYLLAMVSVLALVLFLGHLVRQIRIEMMLGHVSAEATATAHRVLDPLDD
Mb1321c|M.bovis_AF2122/97 GSLALAFVSIAALIYFLHHLMHSIQIDTIMDKVRLRTLGLVDQLYPESDT
Rv1290c|M.tuberculosis_H37Rv GSLALAFVSIAALIYFLHHLMHSIQIDTIMDKVRLRTLGLVDQLYPESDT
: **:.*: **: ** **::.*:*: ::.:* . :: *
Mflv_3804|M.gilvum_PYR-GCK TPDHDYTP-FPPTDASVVTARSSGFLVEVDEQALFAAAVEADVVVWIDRP
Mvan_0986|M.vanbaalenii_PYR-1 HPAGSDVP-VPPADASIVTARSSGFLVSVAERALLEAAVDADVVIWVDRP
MMAR_2975|M.marinum_M DEPDDRIP-SPPTAHSMIVTQASGFLVEVDERAVLAAAVDADAVVWLDRQ
Mb1321c|M.bovis_AF2122/97 ADRQVETPPSPPADAVPLLAPHSGYLQTVDVDDIAELAAASRYTALLVTF
Rv1290c|M.tuberculosis_H37Rv ADRQVETPPSPPADAVPLLAPHSGYLQTVDVDDIAELAAASRYTALLVTF
* **: : : **:* * : *. : . :
Mflv_3804|M.gilvum_PYR-GCK VGSDIVSGVPAALCWSTGPPGDPLSGERLSRLREQVRGALSTGLERTAAQ
Mvan_0986|M.vanbaalenii_PYR-1 VGSDITAGVPVALCWPAQNGDGPLHGDRWISVRDRVAGALTAGNERTATQ
MMAR_2975|M.marinum_M VGSSLIAGVPAAFCWSADP-SCPLDAERLASLRKRVCAAMRTGMERTSTQ
Mb1321c|M.bovis_AF2122/97 VGDYVTAGGLLGWCWRRGTAPGAPGSD----FPQRCLRHVHIGFERTLQQ
Rv1290c|M.tuberculosis_H37Rv VGDYVTAGGLLGWCWRRGTAPGAPGSD----FPQRCLRHVHIGFERTLQQ
**. : :* . ** . .: . .: : * *** *
Mflv_3804|M.gilvum_PYR-GCK DIGYGLRQLTDVVVRALSPGINDPTTAVHGLNSCSATLCELARYRLGRRT
Mvan_0986|M.vanbaalenii_PYR-1 DIGYGFRQLTDVVVRALSPGINDPTTAVHGLNSSSAALCRLARYRLGRRI
MMAR_2975|M.marinum_M DISYGLRQLTDVVIRALSPGINDPTTAVHGLSSCAAVLCDLVNYRLGYRV
Mb1321c|M.bovis_AF2122/97 DIRFGLRQMVDIALRALSPALNDPYTAIQVVHHLSAVESVLASRALPDDV
Rv1290c|M.tuberculosis_H37Rv DIRFGLRQMVDIALRALSPALNDPYTAIQVVHHLSAVESVLASRALPDDV
** :*:**:.*:.:*****.:*** **:: : :*. . *. *
Mflv_3804|M.gilvum_PYR-GCK LRDDDGVVRVVLARPDLPDLLDMVCDQPQLYGASDPTVLARLVSMLRELA
Mvan_0986|M.vanbaalenii_PYR-1 LCDENGAARVVLAQPDLPDLLDLVAGQPLLYGASDPAVLTRLLSMLRELA
MMAR_2975|M.marinum_M LRDDDGAPRVVVAAPDLAALLDVVCTQVQQYGSRDPVVLARLLSLLRELA
Mb1321c|M.bovis_AF2122/97 RRDRAGELLFWLPYPSFATYLHVGCAQIRRYGSREPLVLTALLQLLSAVA
Rv1290c|M.tuberculosis_H37Rv RRDRAGELLFWLPYPSFATYLHVGCAQIRRYGSREPLVLTALLQLLSAVA
* * . :. *.:. *.: . * **: :* **: *:.:* :*
Mflv_3804|M.gilvum_PYR-GCK WVVVVPAHREALSDRLRRMERVVAEQDFDSTDRDRLDRLINHVREALDRR
Mvan_0986|M.vanbaalenii_PYR-1 WVVVLPEHHRAIADRLRRLERAVAEQDFDPVERQRLDQLARNVREALGRR
MMAR_2975|M.marinum_M WTARLPVHRRAVAGRLVRVQQAIAEQGFDASVSAQLDALAGEVRAAMDRR
Mb1321c|M.bovis_AF2122/97 QNCVDPSRRVAVQTQIALVVRAAQREFADESDRAMVLGAAARATEVVERP
Rv1290c|M.tuberculosis_H37Rv QNCVDPSRRVAVQTQIALVVRAAQREFADESDRAMVLGAAARATEVVERP
* :: *: :: : :. .: * : .. .: *
Mflv_3804|M.gilvum_PYR-GCK WPAT--------------------------
Mvan_0986|M.vanbaalenii_PYR-1 WPPG--------------------------
MMAR_2975|M.marinum_M WSPAIGTST---------------------
Mb1321c|M.bovis_AF2122/97 GTLAPPPSTFGQVAAAQAAASTIRSADRDG
Rv1290c|M.tuberculosis_H37Rv GTLAPPPSTFGQVAAAQAAASTIRSADRDG
.