For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SVPSASPSSPPPADREPAVEPLPADYMTYEEFGRRFFETAVSEQRVASAIGAIAGDEFEMGPMAQGPGRI AKVTARVRIQQPRVNRELGELITFAIRIPLEIDMVVDLRIDKPKFMVFGEISLRATAKAAEPLLLILDVE KPRSADISIHVTSKTLRAEVVRIIGGIDAEIKRFIAMHVAGEIDSPGSQKAKVINVAETIDEAWTGI*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_3430 | - | - | 100% (208) | hypothetical protein Mflv_3430 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1809 | - | 9e-66 | 64.29% (182) | hypothetical protein Mb1809 |
| M. tuberculosis H37Rv | Rv1780 | - | 9e-66 | 64.29% (182) | hypothetical protein Rv1780 |
| M. leprae Br4923 | MLBr_01380 | - | 2e-60 | 58.89% (180) | hypothetical protein MLBr_01380 |
| M. abscessus ATCC 19977 | MAB_2384 | - | 2e-58 | 55.85% (188) | hypothetical protein MAB_2384 |
| M. marinum M | MMAR_2661 | - | 4e-65 | 63.39% (183) | hypothetical protein MMAR_2661 |
| M. avium 104 | MAV_2940 | - | 7e-64 | 62.64% (182) | hypothetical protein MAV_2940 |
| M. smegmatis MC2 155 | MSMEG_3683 | - | 3e-80 | 78.69% (183) | hypothetical protein MSMEG_3683 |
| M. thermoresistible (build 8) | TH_0702 | - | 1e-79 | 79.67% (182) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_3096 | - | 2e-63 | 62.84% (183) | hypothetical protein MUL_3096 |
| M. vanbaalenii PYR-1 | Mvan_3184 | - | 7e-88 | 81.25% (192) | hypothetical protein Mvan_3184 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_2661|M.marinum_M MQN---------------------HDYVSYEDFGRRFFEVAVTPDRVAAA
MUL_3096|M.ulcerans_Agy99 MQN---------------------HDYVSYEDFGRRFFEVAVTPDRVAAA
MAV_2940|M.avium_104 MSN---------------------HDYVTYEEFGRRFFEVAVTPERVAAA
Mb1809|M.bovis_AF2122/97 MQN---------------------HDYVTYEEFGRRFFEVAVTPDRVAAA
Rv1780|M.tuberculosis_H37Rv MQN---------------------HDYVTYEEFGRRFFEVAVTPDRVAAA
MLBr_01380|M.leprae_Br4923 MQN---------------------YDYLTYEEFGRKFFEVAVTPARVAAA
MAB_2384|M.abscessus_ATCC_1997 MDSE-----------------PVDHQYLTYEEFGRAFFEIAVSEARVRAA
Mflv_3430|M.gilvum_PYR-GCK MSVPSASPSSPPPADREPAVEPLPADYMTYEEFGRRFFETAVSEQRVASA
Mvan_3184|M.vanbaalenii_PYR-1 MS--------------DSASEPVPAEFLTYETFGRRFFEIAVTEERVGAA
TH_0702|M.thermoresistible__bu MN---------------------GHQYMTYEEFGRRFFEVAVTEKRVGDA
MSMEG_3683|M.smegmatis_MC2_155 MA---------------------DHDYITYEEFGRRFFEVAVSEDRVGDA
* ::::** *** *** **: ** *
MMAR_2661|M.marinum_M FADIAGSEFAMEPIAQGPGGIAKVSAKVKIQDPRVTRKLGDLITFVIHIP
MUL_3096|M.ulcerans_Agy99 FADIAGSEFAMEPIAQGPGGIAKVSAKVEIQDPRVTRKLGDLITFVIHIP
MAV_2940|M.avium_104 FADIAGSEFAMEPIAQGPGKIAKVSANVKIHEPRVTRRLGDTITFVIHIP
Mb1809|M.bovis_AF2122/97 FADIAGSEFAMEPISQGPGGIAKVSANVKIREPRVTRKLGDLITFVIHIP
Rv1780|M.tuberculosis_H37Rv FADIAGSEFAMEPISQGPGGIAKVSANVKIREPRVTRKLGDLITFVIHIP
MLBr_01380|M.leprae_Br4923 FADIAGNEFSMEPIGQGPGKIAKVSAKVKLREPRVTRHLGDNITFVIRIP
MAB_2384|M.abscessus_ATCC_1997 VASIAGEPFEVGPMAQGPGKIAKVTAKVQILDPIVTRNDGETITFDIQVP
Mflv_3430|M.gilvum_PYR-GCK IGAIAGDEFEMGPMAQGPGRIAKVTARVRIQQPRVNRELGELITFAIRIP
Mvan_3184|M.vanbaalenii_PYR-1 IGEIAGEAFEMGPIAQGPGRLAKVTAKVNIQQPRVSRQLGELITFAIRIP
TH_0702|M.thermoresistible__bu IAEIAGEAFELGPIAQGPGRIAKVSAKVRIQTPQVGRQVGDTITFAIRIP
MSMEG_3683|M.smegmatis_MC2_155 IGAIAGDEFEIGPIAQGPGKIAKVTARVKIQKPRVSREIGETIVFTIRIP
.. ***. * : *:.**** :***:*.*.: * * *. *: *.* *::*
MMAR_2661|M.marinum_M LSIDLLLDLRLDKQRFSVTGDIALRATARAAEPLLLIVDVSKPRPSDITV
MUL_3096|M.ulcerans_Agy99 LSIDLLLDLRLDKQRFSVTGDIALRATARAAEPLLLIVDVSKPRPSDITV
MAV_2940|M.avium_104 LSIDLLVDLWLDKQRFVVSGDIALRATARAAEPLLLIVDVAKPRPSDITV
Mb1809|M.bovis_AF2122/97 LSIDLLLDLRLDKQRFMVAGDIALRATARAAEPLLLIVDVAKPRPSDITV
Rv1780|M.tuberculosis_H37Rv LSIDLLLDLRLDKQRFMVAGDIALRATARAAEPLLLIVDVAKPRPSDITV
MLBr_01380|M.leprae_Br4923 LSIDLLVDLRLDKQRFTVAGDIALRATARAAKPLLLMVNVEKPLPSDITV
MAB_2384|M.abscessus_ATCC_1997 LAIDLLIDLKLDKSRFKVAGNIALKATARAAAPLQLVIDVAPPGPSDITV
Mflv_3430|M.gilvum_PYR-GCK LEIDMVVDLRIDKPKFMVFGEISLRATAKAAEPLLLILDVEKPRSADISI
Mvan_3184|M.vanbaalenii_PYR-1 LEIDMVVDLRIDKPKFIVFGEIALRATAKAAEPLLLILDVQKPRPADIAI
TH_0702|M.thermoresistible__bu LEIDMVVDLRIDKPKFMVHGEIALRATALAAEPLLLILDVEKPRPSDISI
MSMEG_3683|M.smegmatis_MC2_155 LEIDMVIDLRIDRPRFMVFGEIALRAHALAAKPLLLILDVKKPRPSDIAI
* **:::** :*: :* * *:*:*:* * ** ** *:::* * .:**::
MMAR_2661|M.marinum_M NVSSKSIRGEVLRILAGVDGEIRRFIAQYVADEIDAPHSQAAQIIDVATQ
MUL_3096|M.ulcerans_Agy99 NVSSKSIRGEVLRILAGVDGEIRRFIAQYVADEIDAPHSQAAQIIDVATQ
MAV_2940|M.avium_104 NVSSKSIRGEVLRILAGVDGEIRRFIAQYVADEIDAPHSQAAQVIDVAQQ
Mb1809|M.bovis_AF2122/97 NVSSKSIRGEVLRILAGVDGEIRRFIAQYVSAEIDSPKSQAAQVINVAEQ
Rv1780|M.tuberculosis_H37Rv NVSSKSIRGEVLRILAGVDGEIRRFIAQYVSAEIDSPKSQAAQVINVAEQ
MLBr_01380|M.leprae_Br4923 NVSSKSIRGEVLRMLAGIDDEIRRFVAQYVTAEIDSPQSQAAQVIDVTHQ
MAB_2384|M.abscessus_ATCC_1997 DVSSNTIRGELLRILAGVDQLISRFIANYVAHEVDNPKAMAARTIDVAHR
Mflv_3430|M.gilvum_PYR-GCK HVTSKTLRAEVVRIIGGIDAEIKRFIAMHVAGEIDSPGSQKAKVINVAET
Mvan_3184|M.vanbaalenii_PYR-1 HVTSKSLRAEVVRIIGGVDAEIKRFIALHVAGEIDSPASQKAKIIDVAER
TH_0702|M.thermoresistible__bu HVTSKTLRAELVRILGGVDAEIKRFIAAHVAGEIDSPQARQAKIIPVADM
MSMEG_3683|M.smegmatis_MC2_155 HVTSKSLRAEVLRILAGVDAEIKRFIAAHVAGEIDSPESEKAKVIDVAEE
.*:*:::*.*::*::.*:* * **:* :*: *:* * : *: * *:
MMAR_2661|M.marinum_M LDDAWTGI
MUL_3096|M.ulcerans_Agy99 LDDASTGI
MAV_2940|M.avium_104 LEQAWPG-
Mb1809|M.bovis_AF2122/97 LDSTWSGP
Rv1780|M.tuberculosis_H37Rv LDSTWSGP
MLBr_01380|M.leprae_Br4923 LEATWADP
MAB_2384|M.abscessus_ATCC_1997 LDEAWTGV
Mflv_3430|M.gilvum_PYR-GCK IDEAWTGI
Mvan_3184|M.vanbaalenii_PYR-1 LDEAWTGV
TH_0702|M.thermoresistible__bu IDEAWTGI
MSMEG_3683|M.smegmatis_MC2_155 LDSSWTGI
:: : ..