For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSTLWVYLRIQAMMFVFGIVGPIFLFVYFAVQPDITVRWMYWWGLFITAADILIALVITDATVNRGRELT GAGAARRTPETD
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3275 | - | - | 100% (82) | hypothetical protein Mflv_3275 |
M. gilvum PYR-GCK | Mflv_5073 | - | 7e-17 | 61.02% (59) | hypothetical protein Mflv_5073 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0705 | - | 3e-09 | 43.64% (55) | hypothetical protein Mb0705 |
M. tuberculosis H37Rv | Rv0686 | - | 3e-09 | 43.64% (55) | hypothetical protein Rv0686 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3845c | - | 4e-06 | 35.59% (59) | hypothetical protein MAB_3845c |
M. marinum M | MMAR_0927 | - | 2e-14 | 55.74% (61) | hypothetical protein MMAR_0927 |
M. avium 104 | MAV_4487 | - | 9e-09 | 45.45% (55) | hypothetical protein MAV_4487 |
M. smegmatis MC2 155 | MSMEG_3504 | - | 1e-19 | 65.57% (61) | hypothetical protein MSMEG_3504 |
M. thermoresistible (build 8) | TH_1888 | - | 2e-16 | 57.63% (59) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_0679 | - | 1e-14 | 55.74% (61) | hypothetical protein MUL_0679 |
M. vanbaalenii PYR-1 | Mvan_2994 | - | 8e-28 | 66.67% (81) | hypothetical protein Mvan_2994 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0705|M.bovis_AF2122/97 --MLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITV Rv0686|M.tuberculosis_H37Rv --MLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITV MAV_4487|M.avium_104 --MLARYLKAQLVVLLCGGLVGPIFLVVYFTLGLGSLLQWMFYVGLLITV Mflv_3275|M.gilvum_PYR-GCK MSTLWVYLRIQAMMFVFG-IVGPIFLFVYFAVQPDITVRWMYWWGLFITA Mvan_2994|M.vanbaalenii_PYR-1 MSTLWLYARIQGMALLFG-LVGPIFLFVYFAAQPDPTLRWMYWWGLLITA MSMEG_3504|M.smegmatis_MC2_155 MSVFWRYVRIQLMVFVVG-IVGPIFLLVYFAAQPDPTIKWMYYTGLLLTA MMAR_0927|M.marinum_M MATLRRYIVIQLMVFVIG-IVGPIFLIVFFASPSDPNAKWGFWVGLFITY MUL_0679|M.ulcerans_Agy99 MATLRRYIVIQLMVFVIG-IVGPIFLIVFFASPSDPNAKWGFWVGLFITY TH_1888|M.thermoresistible__bu MSTFWRYLRIQAFILLCG-IVGPLFLAIYFMTGADPTLKWMFWAGLGVTA MAB_3845c|M.abscessus_ATCC_199 MNVVARFLKILAFSLLCG-IVGPIFIVMYYVID-EPATSWMLYSGIGITI . : . :: * :***:*: ::: * : *: :* Mb0705|M.bovis_AF2122/97 ADVLVALALTNYGAKTAAKTAALERSGVLALAQSTGLSETGTRINDQPLV Rv0686|M.tuberculosis_H37Rv ADVLVALALTNYGAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLV MAV_4487|M.avium_104 ADVLIALALANYGAKSSEKLAALEQNGVLALAQITGITETGTWVNNQQVV Mflv_3275|M.gilvum_PYR-GCK ADILIALVITDATVNRG-RELTGAGA-------------------ARRTP Mvan_2994|M.vanbaalenii_PYR-1 ADILIALAVTDSVVSRD-RDIADKAA-------------------RLPRS MSMEG_3504|M.smegmatis_MC2_155 GEILIALNVTEAISRHHPSTDATKGD-------------------THELP MMAR_0927|M.marinum_M ADVMIALALTAAGEDK---------------------------------- MUL_0679|M.ulcerans_Agy99 ADVMIALALTAAGEDK---------------------------------- TH_1888|M.thermoresistible__bu TDVLIALALTSFGTRSAAKKAALERDGVVALARVTHIGRTNTHINNQPLV MAB_3845c|M.abscessus_ATCC_199 GIVVLAFVLTLLFTKNEEARKLLEANGILALADVMAANETGMTVNDQPVI :::*: :: Mb0705|M.bovis_AF2122/97 KVHLHISGPGITPFDTEDRVIASVTRLGNLTARKLVVLVNPATQQYLIDW Rv0686|M.tuberculosis_H37Rv KVHLHISGPGITPFDTEDRVIASVTRLGNLTARKLVVLVNPATQQYLIDW MAV_4487|M.avium_104 KVHLHIAGPGLVPFDSEDRVIASVTRLGNLNARKVVVLLNPTTNEYRIDW Mflv_3275|M.gilvum_PYR-GCK ETD----------------------------------------------- Mvan_2994|M.vanbaalenii_PYR-1 RRD----------------------------------------------- MSMEG_3504|M.smegmatis_MC2_155 LRD----------------------------------------------- MMAR_0927|M.marinum_M -------------------------------------------------- MUL_0679|M.ulcerans_Agy99 -------------------------------------------------- TH_1888|M.thermoresistible__bu KLDLQISGPGIATFTSRDRVLASPDRMPMLNRGQLVALVDPTTREYQIDW MAB_3845c|M.abscessus_ATCC_199 KLTLQVHGDGISPFRAETRARVSVLQVPTLSRGKLVVLVAPGTEQFQIDW Mb0705|M.bovis_AF2122/97 ERSALVNGLVPAQFTVAEDNKTYDLSGQTGPLMEILQILKANNVPLNRMV Rv0686|M.tuberculosis_H37Rv ERSALVNGLVPAQFTVAEDNKTYDLSGQTGPLMEILQILKANNVPLNRMV MAV_4487|M.avium_104 ERSALVNGLVPAQFTVAEDNTTYDLSGQAGPLMEIMQILKANNIPLNRMV Mflv_3275|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2994|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_3504|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_0927|M.marinum_M -------------------------------------------------- MUL_0679|M.ulcerans_Agy99 -------------------------------------------------- TH_1888|M.thermoresistible__bu QRSALIGGPVPATVTLDSDGSTHDLSGQVEPLLEILRILKAHGIAPDGPI MAB_3845c|M.abscessus_ATCC_199 QRSALLNGQVPAKFTSSSQGREYDLTGQAGPLFEIMKVLKANGIGSDGVI Mb0705|M.bovis_AF2122/97 DIRSNPALRQQVQAVVRRAAERQAPAAEPASQG----------------- Rv0686|M.tuberculosis_H37Rv DIRSNPALRQQVQAVVRRAAERQAPAAEPASQG----------------- MAV_4487|M.avium_104 DIRSNPALRAQIQAVVRRAAQQQAPAGQPAPAGQPATGQPSAPVAAPPGP Mflv_3275|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2994|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_3504|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_0927|M.marinum_M -------------------------------------------------- MUL_0679|M.ulcerans_Agy99 -------------------------------------------------- TH_1888|M.thermoresistible__bu DLRDQPAARQQVQAVIRRPVAGAAQATPAPTPAAS-------------AP MAB_3845c|M.abscessus_ATCC_199 DIRSNPVARQQIDAILRKTEAGERSMGAETGNGG---------------- Mb0705|M.bovis_AF2122/97 SIAERLAELESLRASGAVNAAEYESKRAQIISEI Rv0686|M.tuberculosis_H37Rv SIAERLAELESLRASGAVNAAEYESKRAQIISEI MAV_4487|M.avium_104 SIAARLQELNDLHASGALTEQEYNSRRAAIIAEI Mflv_3275|M.gilvum_PYR-GCK ---------------------------------- Mvan_2994|M.vanbaalenii_PYR-1 ---------------------------------- MSMEG_3504|M.smegmatis_MC2_155 ---------------------------------- MMAR_0927|M.marinum_M ---------------------------------- MUL_0679|M.ulcerans_Agy99 ---------------------------------- TH_1888|M.thermoresistible__bu SIGQRLQELESLRADGMITESEYQAKRRQIIAEL MAB_3845c|M.abscessus_ATCC_199 SVADRLAELDRLKLASLISEAEYGDKRTEILRDL