For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GCRGNWYSGAARPVEPALGGGSGRADGDRDGSWTSDCAHRAGRTADETGEPPRGRPCPACSNPQAARTRP AGHRQHGERLGRRPASVIGYLDTSAFVPLLIDEPASVACRRFWDDADAIVSSRLLYVETAAALAQAGRIG RLTEGEHLQARRRLGQMWSEMDVIEVDEQIVTRAADLAHRLSLRGYDAVHAASAEQLDDDDVAAASGDQR LLSAWMDLGMAIYDTNQKATPEPE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3210 | - | - | 100% (235) | PilT domain-containing protein |
M. gilvum PYR-GCK | Mflv_3018 | - | 3e-18 | 43.44% (122) | hypothetical protein Mflv_3018 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3206c | - | 5e-18 | 42.62% (122) | hypothetical protein Mb3206c |
M. tuberculosis H37Rv | Rv3180c | - | 5e-18 | 42.62% (122) | hypothetical protein Rv3180c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_3166 | - | 2e-16 | 41.80% (122) | hypothetical protein MMAR_3166 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3491 | - | 2e-14 | 39.34% (122) | hypothetical protein MUL_3491 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb3206c|M.bovis_AF2122/97 -------------------------------------------------- Rv3180c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_3166|M.marinum_M -------------------------------------------------- MUL_3491|M.ulcerans_Agy99 -------------------------------------------------- Mflv_3210|M.gilvum_PYR-GCK MGCRGNWYSGAARPVEPALGGGSGRADGDRDGSWTSDCAHRAGRTADETG Mb3206c|M.bovis_AF2122/97 ------------------------------------MPLVYFDASAFVKL Rv3180c|M.tuberculosis_H37Rv ------------------------------------MPLVYFDASAFVKL MMAR_3166|M.marinum_M ------------------------------------MPLVYFDASAFVKL MUL_3491|M.ulcerans_Agy99 ------------------------------------MPLVYFDASAFVKL Mflv_3210|M.gilvum_PYR-GCK EPPRGRPCPACSNPQAARTRPAGHRQHGERLGRRPASVIGYLDTSAFVPL : *:*:**** * Mb3206c|M.bovis_AF2122/97 LTTETGSSLASALWDGCDAALSSRLAYPEVRAALAAAARNHDLTESELAD Rv3180c|M.tuberculosis_H37Rv LTTETGSSLASALWDGCDAALSSRLAYPEVRAALAAAARNHDLTESELAD MMAR_3166|M.marinum_M LTTETGSSLASALWDGCDAALSSRLAYPEVRAALAAAARNHDLTESELAD MUL_3491|M.ulcerans_Agy99 LTTETGGSLASVPWDGCDAALSARLAYPEVRAALAAAARNHDLTESELAE Mflv_3210|M.gilvum_PYR-GCK LIDEPASVACRRFWDDADAIVSSRLLYVETAAALAQAGRIGRLTEGEHLQ * *... . **..** :*:** * *. **** *.* ***.* : Mb3206c|M.bovis_AF2122/97 AERDWEDFWAATRPVELTATVEQHAGHLARAHALRGADAVHLASALAVGD Rv3180c|M.tuberculosis_H37Rv AERDWEDFWAATRPVELTATVEQHAGHLARAHALRGADAVHLASALAVGD MMAR_3166|M.marinum_M AERDWEDFWAATRPIELTATVEQHAGRLARAHALREADAVHLASALAVGE MUL_3491|M.ulcerans_Agy99 AERDWEDFWTATRPVEHTTTVEHHADHLARAHALRGAQAVHMASALAVGA Mflv_3210|M.gilvum_PYR-GCK ARRRLGQMWSEMDVIEVDEQIVTRAADLAHRLSLRGYDAVHAASAEQLDD *.* ::*: :* : :* **: :** :*** *** :. Mb3206c|M.bovis_AF2122/97 PGLVVAVWDRRLHTGAHAAGCRVAP----AQLDP- Rv3180c|M.tuberculosis_H37Rv PGLVVAVWDRRLHTGAHAAGCRVAP----AQLDP- MMAR_3166|M.marinum_M PGLIVAVWDRRLHAGAQAAGCRLAP----AQLDP- MUL_3491|M.ulcerans_Agy99 PGLIIAAWDRRLHTGAQAARCRVAP----AQLDP- Mflv_3210|M.gilvum_PYR-GCK DDVAAASGDQRLLSAWMDLGMAIYDTNQKATPEPE .: * *:** :. : * :*