For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSTLHKVKAYFGMAPMDEYEDDYYEDDDRGPAPRGYRRPREDRFEDEGYAPRGYDGHPEDRRRDYDEPPA YRAGLAGGMPGGFDDARFEARMRAPREFDRTPPRFGAMRGSTRGALAMDPRGMAELFEAGSPLAKITTLR PKDYSEARTIGERFRDGTPVIMDLVSMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVTAE QRRRIAEAGFYSYQ
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_2994 | - | - | 100% (224) | hypothetical protein Mflv_2994 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2171c | - | 4e-78 | 69.36% (235) | hypothetical protein Mb2171c |
| M. tuberculosis H37Rv | Rv2147c | - | 4e-78 | 69.36% (235) | hypothetical protein Rv2147c |
| M. leprae Br4923 | MLBr_00920 | - | 3e-74 | 69.87% (229) | hypothetical protein MLBr_00920 |
| M. abscessus ATCC 19977 | MAB_2012 | - | 1e-79 | 71.24% (226) | hypothetical protein MAB_2012 |
| M. marinum M | MMAR_3187 | - | 6e-78 | 69.07% (236) | hypothetical protein MMAR_3187 |
| M. avium 104 | MAV_2343 | - | 1e-68 | 66.98% (215) | hypothetical protein MAV_2343 |
| M. smegmatis MC2 155 | MSMEG_4219 | - | 4e-99 | 82.74% (226) | hypothetical protein MSMEG_4219 |
| M. thermoresistible (build 8) | TH_2375 | - | 2e-92 | 76.86% (229) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_3495 | - | 9e-78 | 69.33% (238) | hypothetical protein MUL_3495 |
| M. vanbaalenii PYR-1 | Mvan_3517 | - | 1e-108 | 88.39% (224) | hypothetical protein Mvan_3517 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2171c|M.bovis_AF2122/97 MNSHCSHTFITDNRSPRARRGHAMSTLHKVKAYFGMAPMEDYDDEYYDDR
Rv2147c|M.tuberculosis_H37Rv MNSHCSHTFITDNRSPRARRGHAMSTLHKVKAYFGMAPMEDYDDEYYDDR
MAV_2343|M.avium_104 --------------------------------------MDDYEDEYYDDR
MMAR_3187|M.marinum_M -----------------------MSTLHKVKAYFGMAPMEDYDDEYYDDR
MUL_3495|M.ulcerans_Agy99 -----------------------MSTLHKVKAYFGMAPMEDYDDEYYDDR
MLBr_00920|M.leprae_Br4923 -----------------------MSTLHKVKAYFGMAPMEDYDDEYYDDR
Mflv_2994|M.gilvum_PYR-GCK -----------------------MSTLHKVKAYFGMAPMDEYEDDYYEDD
Mvan_3517|M.vanbaalenii_PYR-1 -----------------------MSTLHKVKAYFGMAPMDDYEDDYYEDD
MSMEG_4219|M.smegmatis_MC2_155 -----------------------MSTLHKVKAYFGMAPMDDYEDEYYEDD
TH_2375|M.thermoresistible__bu -----------------------MSTLHKVKAYFGMAPLDDYEDEYYEDD
MAB_2012|M.abscessus_ATCC_1997 -----------------------MSTLHKVKAYFGMAPMDDYDDEYYDDV
:::*:*:**:*
Mb2171c|M.bovis_AF2122/97 A----PSRGYARPRFDDDYGRYDGRDYDDARSDS----RGDLRGEPADYP
Rv2147c|M.tuberculosis_H37Rv A----PSRGYARPRFDDDYGRYDGRDYDDARSDS----RGDLRGEPADYP
MAV_2343|M.avium_104 A----PSRGFPRPRFDDGYGRYDGDDYDDPRR------------EPADYP
MMAR_3187|M.marinum_M G----PSRGYSRPRFEDDYGRYEGRDFEDPRRDPRADMRADLRGEPADYP
MUL_3495|M.ulcerans_Agy99 G----PSRGYSRPRFEDDYGRYEGRDFEDPRRDPRAGMRADLRGEPADYP
MLBr_00920|M.leprae_Br4923 S----PTHGYGRSRFEEGYGRYEGRDYSDLRG------------DPTGYL
Mflv_2994|M.gilvum_PYR-GCK D----RGPAPRGYRR-PREDRFEDEGYAPRGYDGHPEDRRRDYDEPPAYR
Mvan_3517|M.vanbaalenii_PYR-1 D----RVPA-RGYRR-PREDRFEDEAY-PRGYD----DRAREYDEPAGYR
MSMEG_4219|M.smegmatis_MC2_155 D----RGARAGGYSRRPREDRFEEEAY---GYEG------HEYDEGPAYR
TH_2375|M.thermoresistible__bu E----RGPSRGGYARRPRAERFEDDEY--GPVDG------RDYD-GPDYE
MAB_2012|M.abscessus_ATCC_1997 DAPAPRRAPVEDRRYPRRGERFADDAE-------------YGYD-EPGYR
*: . *
Mb2171c|M.bovis_AF2122/97 PP---GYRGGYADEPRF-----RPREFDRA-EMTRPRFGSWLRN-STRGA
Rv2147c|M.tuberculosis_H37Rv PP---GYRGGYADEPRF-----RPREFDRA-EMTRPRFGSWLRN-STRGA
MAV_2343|M.avium_104 PPA--GYRGGYAEESRYGA--VHPREFERP-EMGRPRFGSWLRN-STRGA
MMAR_3187|M.marinum_M PPG--GYRGGYPDEARF-----QPREFDRA-DMARPRFGSWLRN-PTRGS
MUL_3495|M.ulcerans_Agy99 PPG--GYRGGYPDEARF-----QPREFDRA-DMARPRFGSWLRN-PTRGS
MLBr_00920|M.leprae_Br4923 PL---GYRGGYGDEHRF-----RPREFDRP-DLSRPRLGSWLRN-STRGA
Mflv_2994|M.gilvum_PYR-GCK AGLAGGMPGGFDD-ARFEARMRAPREFDR----TPPRFGAMRG--STRGA
Mvan_3517|M.vanbaalenii_PYR-1 --------GGFDD-ARFEPRLRGPREFDR----TPPRFGGLRG--STRGA
MSMEG_4219|M.smegmatis_MC2_155 ----GGYAERFADEPRFEGRMRAPREFDRP---APARLGAMRG--STRGA
TH_2375|M.thermoresistible__bu AP---GYRGGYHDDPRFEPRMRAPREFDRPHDMGRPRFAPLRG--ATRGA
MAB_2012|M.abscessus_ATCC_1997 ----AGGPAGYADEDRFVSRHAPSREFDRP----APRLGSLRGSAPTRGA
: : *: .***:* .*:. .***:
Mb2171c|M.bovis_AF2122/97 LAMDPRRMAMMFEDGHPLSKITTLRPKDYSEARTIGERFRDGSPVIMDLV
Rv2147c|M.tuberculosis_H37Rv LAMDPRRMAMMFEDGHPLSKITTLRPKDYSEARTIGERFRDGSPVIMDLV
MAV_2343|M.avium_104 LAMDPRRMAMMFEEGHPLSKITTLRPKDYSEARTIGERFRDGTPVIMDLV
MMAR_3187|M.marinum_M LAMDPRRMAMMFEEGHPLSKITTLRPKDYSEARTIGERFRDGTPVIMDLV
MUL_3495|M.ulcerans_Agy99 LAMDPRRMAMMFEEGHPLSKITTLRPKDYSEARTIGERFRDGTPVIMDLV
MLBr_00920|M.leprae_Br4923 LAMDPRRMAMLFDEGSPLSKITTLRPKDYSEARTIGERFRDGTPVIIDLV
Mflv_2994|M.gilvum_PYR-GCK LAMDPRGMAELFEAGSPLAKITTLRPKDYSEARTIGERFRDGTPVIMDLV
Mvan_3517|M.vanbaalenii_PYR-1 LAMDPRGMAELFEAGSPLAKITTLRPKDYSEARTIGERFRDGTPVIMDLV
MSMEG_4219|M.smegmatis_MC2_155 LAMDPRGMAELFEAGSPLAKITTLRPKDYSEARTIGERFRDGTPVIMDLV
TH_2375|M.thermoresistible__bu LAMDPRRMAELFDAGSPLSKITTLRPKDYSEARTIGERFRDGNPVIMDLV
MAB_2012|M.abscessus_ATCC_1997 LAMDPR-RAAIFDEGSPLSKITTLRPKDYSEARTIGERFRDGTPVIMDLV
****** * :*: * **:***********************.***:***
Mb2171c|M.bovis_AF2122/97 SMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVSPEERRRI
Rv2147c|M.tuberculosis_H37Rv SMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVSPEERRRI
MAV_2343|M.avium_104 SMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVSPEERRRI
MMAR_3187|M.marinum_M SMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVTPEERRRI
MUL_3495|M.ulcerans_Agy99 SMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVTPEERRRI
MLBr_00920|M.leprae_Br4923 SMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVSPEERRRI
Mflv_2994|M.gilvum_PYR-GCK SMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVTAEQRRRI
Mvan_3517|M.vanbaalenii_PYR-1 SMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVTAEQRRRI
MSMEG_4219|M.smegmatis_MC2_155 SMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVTAEERRRI
TH_2375|M.thermoresistible__bu AMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVTAEERRRI
MAB_2012|M.abscessus_ATCC_1997 SMDNADAKRVVDFAAGLAFALRGSFDKVATKVFLLSPADIDVSAEERRRI
:********:*****************************:**:.*:****
Mb2171c|M.bovis_AF2122/97 AETGFYAYQ
Rv2147c|M.tuberculosis_H37Rv AETGFYAYQ
MAV_2343|M.avium_104 AETGFYAYQ
MMAR_3187|M.marinum_M AETGFYAYQ
MUL_3495|M.ulcerans_Agy99 AETGFYAYQ
MLBr_00920|M.leprae_Br4923 AETGFYAYQ
Mflv_2994|M.gilvum_PYR-GCK AEAGFYSYQ
Mvan_3517|M.vanbaalenii_PYR-1 AEAGFYSYQ
MSMEG_4219|M.smegmatis_MC2_155 AEAGFYSYR
TH_2375|M.thermoresistible__bu AEAGFYSYQ
MAB_2012|M.abscessus_ATCC_1997 AESGFYSYQ
**:***:*: