For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTFDARLASYSSPMLSIFRIMFGVLFTLHGTMKLFGWPLGAAVPVGTWPYWFAGLIEVVCGILITVGFFT RIAAFIAAGHMAVAYFWQHWGIIGGEPKSFWPLGGDAGGNGGELAILYCFAFLLLATLGAGAWSVDGRRQ VAGGSGVRRGRVVTGTAAPPVTAAPAAQPVRRGGLLSRFRRNRY*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_2914 | - | - | 100% (185) | DoxX family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3091c | - | 3e-39 | 52.14% (140) | integral membrane protein |
| M. tuberculosis H37Rv | Rv3064c | - | 4e-39 | 52.14% (140) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1930c | - | 4e-26 | 47.76% (134) | hypothetical protein MAB_1930c |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_4292 | - | 1e-42 | 57.75% (142) | integral membrane protein |
| M. thermoresistible (build 8) | TH_0215 | - | 6e-50 | 63.97% (136) | integral membrane protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_3593 | - | 7e-49 | 62.67% (150) | DoxX family protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3091c|M.bovis_AF2122/97 ------------------------------MVKDLDRRLAGCLPAVLSLF
Rv3064c|M.tuberculosis_H37Rv ------------------------------MVKDLDRRLAGCLPAVLSLF
Mflv_2914|M.gilvum_PYR-GCK ------------------------------MTT-FDARLASYSSPMLSIF
Mvan_3593|M.vanbaalenii_PYR-1 ------------------------------MTTNLDARLTSYSAPVLSIF
MSMEG_4292|M.smegmatis_MC2_155 ------------------------------MTTNLDTRLATYSPVVVAIF
TH_0215|M.thermoresistible__bu LIGPDRSDRIDRTGAAIRRAARPIWLYRLLMTTTVDARLARLSTPALALF
MAB_1930c|M.abscessus_ATCC_199 --------------------------MASSSTPSSVAKLDGATPIVLSLF
. :* . :::*
Mb3091c|M.bovis_AF2122/97 RLVYGLLFAGYGSMILFGWPVT--------SAQPVEFGSWPG-WYAGVIE
Rv3064c|M.tuberculosis_H37Rv RLVYGLLFAGYGSMILFGWPVT--------SAQPVEFGSWPG-WYAGVIE
Mflv_2914|M.gilvum_PYR-GCK RIMFGVLFTLHGTMKLFGWP----------LGAAVPVGTWPY-WFAGLIE
Mvan_3593|M.vanbaalenii_PYR-1 RIVFGLLFTLHGAQKVLAWPTGMQAGPGDFTGPAVPVGTWPY-WWAGLLE
MSMEG_4292|M.smegmatis_MC2_155 RIVFGFLFAVHGASKLFAWPVDS-------GSGAVPVGTWPY-WYAGVIE
TH_0215|M.thermoresistible__bu RIIIGLLFALHGAMKLFGWP----------HGESVPVGTWPV-WWAGLIE
MAB_1930c|M.abscessus_ATCC_199 RIVFGLLFTIHGTAILFRWP---------DLASMPPVESWSLGWWAGAIE
*:: *.**: :*: :: ** . . :*. *:** :*
Mb3091c|M.bovis_AF2122/97 LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQ------PYALWPIGGPP
Rv3064c|M.tuberculosis_H37Rv LVAGLLIATGLFTRAVAFVASGEMAVAYFWMHQ------PYALWPIGGPP
Mflv_2914|M.gilvum_PYR-GCK VVCGILITVGFFTRIAAFIAAGHMAVAYFWQHWGIIGGEPKSFWPLGGDA
Mvan_3593|M.vanbaalenii_PYR-1 IVLGLLITVGLFTRIAAFIAAGQMAVAYFWQHL------PKAFFPIE---
MSMEG_4292|M.smegmatis_MC2_155 LVLGLLIMVGLFTRIAAFIASGHMAVAYFWQHQ------PKGLLPLE---
TH_0215|M.thermoresistible__bu LIVGLLVTVGLFTRISAIIGSGQMAVAYFWMHWPPLEGEPTSFWPVV---
MAB_1930c|M.abscessus_ATCC_199 FLTGVAILFGAGTRIAAFIASGTMAFAYFTQHQ------PEGLLPIE---
.: *: : * ** *::.:* **.*** * * .: *:
Mb3091c|M.bovis_AF2122/97 DGNGGTPAILFCFGFFLLVFTGGGIYSID------------ARRTVTA--
Rv3064c|M.tuberculosis_H37Rv DGNGGTPAILFCFGFFLLVFTGGGIYSID------------ARRTVTA--
Mflv_2914|M.gilvum_PYR-GCK GGNGGELAILYCFAFLLLATLGAGAWSVDGRRQVAGGSGVRRGRVVTGTA
Mvan_3593|M.vanbaalenii_PYR-1 --NGGEPAILFCFGFLLLVAMGAGAWSID---------ALRQGRAVVRS-
MSMEG_4292|M.smegmatis_MC2_155 --NGGEPTVLFCFGFLLLFAIGGGAFALD---------AARAKR------
TH_0215|M.thermoresistible__bu --NGGEPALLYCFGFLLLAATGPGAWALD---------AMMRRRAPATA-
MAB_1930c|M.abscessus_ATCC_199 --NNGELAALFCWGFLLLVFTGGGSLSID---------AALKKKS-----
*.* : *:*:.*:** * * ::* :
Mb3091c|M.bovis_AF2122/97 ---------------------------
Rv3064c|M.tuberculosis_H37Rv ---------------------------
Mflv_2914|M.gilvum_PYR-GCK APPVTAAPAAQPVRRGGLLSRFRRNRY
Mvan_3593|M.vanbaalenii_PYR-1 ---------------------------
MSMEG_4292|M.smegmatis_MC2_155 ---------------------------
TH_0215|M.thermoresistible__bu ---------------------------
MAB_1930c|M.abscessus_ATCC_199 ---------------------------