For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ASPSWNLKAFQRFLVKGTENLVFNEAPKIVRQLQRSDTLQRGIAQGIRIGLDVLSGPAPSNTPALPAGRP VSRNFVPTAHRARKVSYSPDLDGRADPGEIVWTWVAFEDDPTRGKDRPVLVVGRDGRVLLGLMLSSQDHH RGDPQWVGIGSGTWDYEGRSSWVRLDRVLDVPEEGIRREGAILAREVFDVVAARLRAEYSWS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_2672 | - | - | 100% (203) | hypothetical protein Mflv_2672 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2428 | - | 1e-71 | 67.55% (188) | hypothetical protein Mb2428 |
| M. tuberculosis H37Rv | Rv2405 | - | 1e-71 | 67.55% (188) | hypothetical protein Rv2405 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1639c | - | 1e-69 | 64.92% (191) | hypothetical protein MAB_1639c |
| M. marinum M | MMAR_3725 | - | 1e-69 | 64.43% (194) | hypothetical protein MMAR_3725 |
| M. avium 104 | MAV_1777 | - | 3e-74 | 67.69% (195) | hypothetical protein MAV_1777 |
| M. smegmatis MC2 155 | MSMEG_4558 | - | 5e-84 | 73.91% (207) | hypothetical protein MSMEG_4558 |
| M. thermoresistible (build 8) | TH_1454 | - | 9e-79 | 71.50% (200) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_3668 | - | 2e-65 | 63.89% (180) | hypothetical protein MUL_3668 |
| M. vanbaalenii PYR-1 | Mvan_3882 | - | 4e-97 | 83.25% (203) | hypothetical protein Mvan_3882 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2672|M.gilvum_PYR-GCK ---MASPSWNLKAFQR----FLVKGTENLVFNEAPKIVRQLQRSDTLQRG
Mvan_3882|M.vanbaalenii_PYR-1 MAGMASSSSYLKAFQR----FLVKGTENLVFNEAPKLVRQLQKSDTVARG
MSMEG_4558|M.smegmatis_MC2_155 ---MVS---QWKTFQR-----VLKGTENLVFNEAPKFVRQLQKSDNVPRT
TH_1454|M.thermoresistible__bu ---MAS---QWKPFQR-----FVQATEKLVFDEAPRLIRQLQKPDGLPRN
MAB_1639c|M.abscessus_ATCC_199 ---MAS---QWQTLGRKLGKIAVNTLEQVVFREGPKVLRQLQGSE----F
Mb2428|M.bovis_AF2122/97 -------------MQR--------FAENLVFTEAPKLVRHLQNTQETLRT
Rv2405|M.tuberculosis_H37Rv -------------MQR--------FAENLVFTEAPKLVRHLQNTQETLRT
MMAR_3725|M.marinum_M --MTSAGKSQWKTFQR--------FAENLVFNEAPKVVHRLQNTQETLRT
MUL_3668|M.ulcerans_Agy99 -----------------------------MFNEAPKVVHRLQNTQETLRT
MAV_1777|M.avium_104 --MASARKSQWKAFQR--------FAENLVFDRAPRLVRHVQNSQTVLRE
:* ..*:.::::* .:
Mflv_2672|M.gilvum_PYR-GCK IAQ--------GIRIGLDV----LSGPAPSNTPALPAGRPVSRNFVPTAH
Mvan_3882|M.vanbaalenii_PYR-1 IQQ--------GIRIGLDV----LAGQAQTGAPALPAGRPVSSNFVPTAH
MSMEG_4558|M.smegmatis_MC2_155 VQQGIQQGIQQGLRLGIDVLASGLAGATANNAPAITAGRPVSKHAVPTAH
TH_1454|M.thermoresistible__bu VQR--------GLRMGLDAGLNALAGAIAEEATPTLTGRPITRHSVPTAQ
MAB_1639c|M.abscessus_ATCC_199 VQR--------GLQLGLEA-----IGVVEPEQQTAIPGRPVTNRSVPTAH
Mb2428|M.bovis_AF2122/97 IRQ--------AVKITANI----MTTAVPSPPAEIAAGRPVTSTSCPTAA
Rv2405|M.tuberculosis_H37Rv IRQ--------AVKITANI----MTTAVPSPPAEIAAGRPVTSTSCPTAA
MMAR_3725|M.marinum_M IQQ--------AVKITANI----VAMGLPPPPAEITAGRPVTDTSSPTAA
MUL_3668|M.ulcerans_Agy99 IQQ--------AVKITANI----VAMGLPPPPAEITAGRPVTDTSSPTAA
MAV_1777|M.avium_104 LQQ--------AVKITANV----IAAAAPPPPDTAVLGRPVTRSSLPTAQ
: : .::: : ***:: ***
Mflv_2672|M.gilvum_PYR-GCK RARKVSYSPDLDGRADPGEIVWTWVAFEDDPTRGKDRPVLVVGRDGRVLL
Mvan_3882|M.vanbaalenii_PYR-1 RARKVSYAPNLDGRADPGEIVWTWVAFEDDPTQGKDRPVLVVGRDRNILF
MSMEG_4558|M.smegmatis_MC2_155 RARKVVYSPDLDGRADPGEIVWTWVVYEDDPTKGKDRPVLVVGRDHRTLL
TH_1454|M.thermoresistible__bu RARRVVYAPDLDGRADPGEIVWTWVAYEDDPTRGKDRPVLVVGRDRNTLL
MAB_1639c|M.abscessus_ATCC_199 RARRIEYSPDLDGRADPGEIVWTWVVYEDDPAQGKDRPVLVVGRDGALLL
Mb2428|M.bovis_AF2122/97 RARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLL
Rv2405|M.tuberculosis_H37Rv RARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLL
MMAR_3725|M.marinum_M RARKLTYSPDLDGRADPGEIVWTWVVYEDDPTQGQDRPVLVVGRERNVLL
MUL_3668|M.ulcerans_Agy99 RARKLTYSPDHDGRADPGEIVWTWVVYEDDPTQGQDRPVLVVGRERNVLL
MAV_1777|M.avium_104 RARKLVYAPKLDGRADPGEIVWTWVVYEDDPSRGKDRPVLVVGRDRSTLL
***:: *:*. **************.:*:**::*:*********: *:
Mflv_2672|M.gilvum_PYR-GCK GLMLSSQDHHRGDPQWVGIGSGTWDYEGRSSWVRLDRVLDVPEEGIRREG
Mvan_3882|M.vanbaalenii_PYR-1 GLMLSSRDHHGDDPNWVGIGAGSWDYDGRPSWVRLDRVLDVPEESIRREG
MSMEG_4558|M.smegmatis_MC2_155 GLMLSSQEHRSDDPNWVGIGTGTWDYDGRPSWVRLDRVLDVPEEGIRREG
TH_1454|M.thermoresistible__bu GLMLSSQQHHADDPEWVNIGSGSWDYEGRTSWVRLDRVLDVPEEGIRREG
MAB_1639c|M.abscessus_ATCC_199 GLMLSSRERLDSDPDWVALGSGSWDYDGRPSWVRLDRVLDVPEEGIRREG
Mb2428|M.bovis_AF2122/97 GLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREG
Rv2405|M.tuberculosis_H37Rv GLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREG
MMAR_3725|M.marinum_M ALMLSSQEQYSADPDWVAIGTGDWDFEGQQGWVRLDRVLDVPEESIRRQG
MUL_3668|M.ulcerans_Agy99 ALMLSSQEQYSADPDWVAIGTGDWDFEGQQGWVRLDRVLDVPEESIRRQG
MAV_1777|M.avium_104 GLMVSSQERHAADPEWVGIGSGSWDYEGRPSWVRLDRVLVVPEEGIRREG
.*::**::: * :** :*:* **::*: .******** ****.***:*
Mflv_2672|M.gilvum_PYR-GCK AILAREVFDVVAARLRAEYSWS
Mvan_3882|M.vanbaalenii_PYR-1 AILERVVFDVVAARLRAEYSWT
MSMEG_4558|M.smegmatis_MC2_155 AILDRVRFEVVAERLRAEYSWS
TH_1454|M.thermoresistible__bu AILERHTFELVAARLRAEYSWS
MAB_1639c|M.abscessus_ATCC_199 AILDVERFNVVAARLRAQFSWS
Mb2428|M.bovis_AF2122/97 AILEREVFDVVAARLRADYAWR
Rv2405|M.tuberculosis_H37Rv AILEREVFDVVAARLRADYAWR
MMAR_3725|M.marinum_M AILQRDVFDVVAARLRAEYSWR
MUL_3668|M.ulcerans_Agy99 AILQRDVFDVVAARLRAEYGWR
MAV_1777|M.avium_104 AILDREVFDVVAARLRAQYAWS
*** *::** ****::.*