For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SAVRDELVWIDCEMTGLDLKTDLLIEIAVLVTDSELNILGDGLDVVIHAEDSALDSMIDVVTQMHTKSGL IEEVRASTVDVATAEDMVMTYIREHVRQAKTAPLAGNSIATDRGFLARDMPKLDDYLHYRMIDVSSIKEL CRRWYPRIYFGQPEKGLAHRALADIHESIRELRYYRQTAFVAPPGPSTSDIAAVAAELGPNGPTDSAPGD SSG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2543 | - | - | 100% (214) | oligoribonuclease |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2539 | orn | 2e-91 | 76.28% (215) | oligoribonuclease |
M. tuberculosis H37Rv | Rv2511 | orn | 2e-91 | 76.28% (215) | oligoribonuclease |
M. leprae Br4923 | MLBr_00427 | - | 3e-87 | 74.04% (208) | oligoribonuclease |
M. abscessus ATCC 19977 | MAB_1533c | - | 5e-86 | 74.52% (208) | oligoribonuclease |
M. marinum M | MMAR_3859 | orn | 1e-89 | 76.28% (215) | oligoribonuclease Orn |
M. avium 104 | MAV_1664 | - | 2e-91 | 75.81% (215) | oligoribonuclease |
M. smegmatis MC2 155 | MSMEG_4724 | - | 7e-99 | 84.21% (209) | oligoribonuclease |
M. thermoresistible (build 8) | TH_1381 | - | 1e-100 | 82.33% (215) | OLIGORIBONUCLEASE ORN |
M. ulcerans Agy99 | MUL_3790 | orn | 3e-89 | 75.93% (216) | oligoribonuclease |
M. vanbaalenii PYR-1 | Mvan_4100 | - | 1e-109 | 91.12% (214) | oligoribonuclease |
CLUSTAL 2.0.9 multiple sequence alignment Mb2539|M.bovis_AF2122/97 -------MQDELVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDV Rv2511|M.tuberculosis_H37Rv -------MQDELVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDV MLBr_00427|M.leprae_Br4923 -------MHDELVWIDCEMTGLDLGSDQLIEIAALVTDADLNILGDGVDV MAV_1664|M.avium_104 -------MRDELVWIDCEMTGLDLGSDKLIEIAALVTDAELNVLGDGVDV MMAR_3859|M.marinum_M -------MREELVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDV MUL_3790|M.ulcerans_Agy99 -------MREELVWIDCEMTGLDLGPDKLIEIAALVTDADLNILGDGVDV MAB_1533c|M.abscessus_ATCC_199 ----MSAPRDELVWIDCEMTGLDLGSDKLIEIAALVTDGDLNILGEGVDV Mflv_2543|M.gilvum_PYR-GCK ----MSAVRDELVWIDCEMTGLDLKTDLLIEIAVLVTDSELNILGDGLDV Mvan_4100|M.vanbaalenii_PYR-1 ----MSAVRDELVWIDCEMTGLDLKSDRLIEIAVLVTDSELNILGDGLDV MSMEG_4724|M.smegmatis_MC2_155 MRILWIFVRDELVWIDCEMTGLDLKSDRLIEIAVLVTDADLNILGDGLDV TH_1381|M.thermoresistible__bu -------VRDELVWIDCEMTGLDLKSDRLIEIAVLVTDADLNILGEGLDV ::************** .* *****.****.:**:**:*:** Mb2539|M.bovis_AF2122/97 VMHADDAALSGMIDVVAEMHSRSGLIDEVKASTVDLATAEAMVLDYINEH Rv2511|M.tuberculosis_H37Rv VMHADDAALSGMIDVVAEMHSRSGLIDEVKASTVDLATAEAMVLDYINEH MLBr_00427|M.leprae_Br4923 VIHIDSTALSSMIDVVAEMHSRSGLINEVESSIVDLVTAESIVLDYINNH MAV_1664|M.avium_104 VIHADDAALAAMGEVVTEMHSRSGLIDEVKASTVDLATAEEMVLDYIRTH MMAR_3859|M.marinum_M VIHADDAALSSMVDVVADMHSRSGLTEEVRASTVDMATAEAMVLDYIGEH MUL_3790|M.ulcerans_Agy99 VIHADDAALSSMVDVVADMHSRSGLTEEVRASTVDMATAEAMVLDYIGEH MAB_1533c|M.abscessus_ATCC_199 VIHADDAALAAMPPVVADMHAKSGLTKEVRTSVVTLQEAEAMVLDYIRQH Mflv_2543|M.gilvum_PYR-GCK VIHAEDSALDSMIDVVTQMHTKSGLIEEVRASTVDVATAEDMVMTYIREH Mvan_4100|M.vanbaalenii_PYR-1 VIHADETAMSSMIDVVAQMHAKSGLIDEVRASTVDLATAEDMVMTYIREH MSMEG_4724|M.smegmatis_MC2_155 VIHADDESLSSMVDVVKQMHARSGLTEEVRRSTVDLATAEEMVLDYIRGH TH_1381|M.thermoresistible__bu VIHTDDEALDNMIPVVTEMHTRSGLIDEVRASTIDLATAEEMVLDYVRSH *:* :. :: * ** :**::*** .**. * : : ** :*: *: * Mb2539|M.bovis_AF2122/97 VKQPKTAPLAGNSIATDRAFIARDMPTLDSFLHYRMIDVSSIKELCRRWY Rv2511|M.tuberculosis_H37Rv VKQPKTAPLAGNSIATDRAFIARDMPTLDSFLHYRMIDVSSIKELCRRWY MLBr_00427|M.leprae_Br4923 VKQPKTAPLAGNSIATDRSFIARDMPTLDSFLHYRMIDVSSIKELCRRWY MAV_1664|M.avium_104 VKAPKTAPLAGNSIATDRAFIVRDMPALDSYLHYRMIDVSSIKELCRRWY MMAR_3859|M.marinum_M VKQPKTAPLAGNSIATDRSFIARDMPALDAFLHYRMIDVSSIKELCRRWY MUL_3790|M.ulcerans_Agy99 VKQPKTAPLAGNSIATDRSFIARDMPALDAFLHYRMIDVSSIKELCRRWY MAB_1533c|M.abscessus_ATCC_199 VASAKTAPLAGNSIATDRGFIARDMPELDAFLHYRMIDVSSIKELCRRWY Mflv_2543|M.gilvum_PYR-GCK VRQAKTAPLAGNSIATDRGFLARDMPKLDDYLHYRMIDVSSIKELCRRWY Mvan_4100|M.vanbaalenii_PYR-1 VKQAKTAPLAGNSIATDRGFIARDMPKLDDYLHYRMIDVSSIKELCRRWY MSMEG_4724|M.smegmatis_MC2_155 VKQAKTAPLAGNSIATDRGFIARDMPKLDDYLHYRMIDVSSIKELCRRWY TH_1381|M.thermoresistible__bu VKQAKTAPLAGNSIATDRGFIARDMPKLDDYLHYRMIDVSSIKELCRRWY * .**************.*:.**** ** :******************* Mb2539|M.bovis_AF2122/97 PRIYFGQPPKGLTHRALADIHESIRELRFYRRTAFVPQPGPSTSEIAAVV Rv2511|M.tuberculosis_H37Rv PRIYFGQPPKGLTHRALADIHESIRELRFYRRTAFVPQPGPSTSEIAAVV MLBr_00427|M.leprae_Br4923 PRIYFGQPAKGLTHRALADIHESIRELRFYRRTAFVPPPGPSTREIAEVV MAV_1664|M.avium_104 PRIYFGQPVKGLTHRALADIHESIRELQFYRRTAFVAPPGPSTSEIEAVA MMAR_3859|M.marinum_M PRIYFGQPPKGLAHRALADIHESIRELQYYRRTAFVPQPGPTTSEITAVV MUL_3790|M.ulcerans_Agy99 PRIYFGQPPKGLAHRALADIHESIRELQYYRRTAFVPQPGPTTSEITAVV MAB_1533c|M.abscessus_ATCC_199 PRIYFGQPDKGLAHRALADIKESIRELRYYRRAAFVPDPGPSTSDLVAIV Mflv_2543|M.gilvum_PYR-GCK PRIYFGQPEKGLAHRALADIHESIRELRYYRQTAFVAPPGPSTSDIAAVA Mvan_4100|M.vanbaalenii_PYR-1 PRIYFGQPEKGLAHRALADIHESIRELRYYRQTAFVAPPGPSTSDIAAVA MSMEG_4724|M.smegmatis_MC2_155 PRIYFGQPEKGLAHRALADIHESIRELKYYRATAFVPQPGPSTSDIAAIA TH_1381|M.thermoresistible__bu PRIYFGQPEKGLAHRALADIHESIRELQYYRRTAFVPPPGPSTSEIAAIA ******** ***:*******:******::** :***. ***:* :: :. Mb2539|M.bovis_AF2122/97 AELSDGAGAQEETDSAEAPQSG Rv2511|M.tuberculosis_H37Rv AELSDGAGAQEETDSAEAPQSG MLBr_00427|M.leprae_Br4923 ADLSGTPATPGDIDSAYERPNG MAV_1664|M.avium_104 AALDEGKDAPGPSDSASAPPTG MMAR_3859|M.marinum_M ADLQGADDAPEATDSAQERPSG MUL_3790|M.ulcerans_Agy99 ADLQGVDDAPEATDSAQERPSG MAB_1533c|M.abscessus_ATCC_199 ADLDNAP----DTDSA------ Mflv_2543|M.gilvum_PYR-GCK AELGPNGPTDSAPGDSSG---- Mvan_4100|M.vanbaalenii_PYR-1 AELGPVANGDSARGGSSG---- MSMEG_4724|M.smegmatis_MC2_155 AELGP-PSSNSADTDSA----- TH_1381|M.thermoresistible__bu AELGGTPSSPDGTDSSSEPSTG * * .: