For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTATTALPTGTWTIDPVHSAVNFSVRHLMVSKVRGGFDTFSGAVTVAEDGTPSVRAEIAVGSVDTRNEQR DAHLRSADFFDVENHPTATFVSTAVRPDGDDYILDGDFTLKGVTRPISLALQFNGVNPGMGHGEVAGFEA SVVVNRKDFGIDIDMPLETGGAVVGDKVTITLEIEATRQA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_2169 | - | - | 100% (181) | YceI family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4525 | - | 8e-61 | 64.61% (178) | hypothetical protein MAB_4525 |
| M. marinum M | MMAR_1487 | - | 1e-14 | 34.48% (145) | hypothetical protein MMAR_1487 |
| M. avium 104 | MAV_4031 | - | 2e-14 | 36.07% (122) | YceI like family protein |
| M. smegmatis MC2 155 | MSMEG_5125 | - | 4e-74 | 73.08% (182) | YceI like family protein |
| M. thermoresistible (build 8) | TH_1829 | - | 3e-79 | 76.54% (179) | YceI like family protein |
| M. ulcerans Agy99 | MUL_2452 | - | 1e-14 | 34.48% (145) | hypothetical protein MUL_2452 |
| M. vanbaalenii PYR-1 | Mvan_4531 | - | 1e-86 | 85.64% (181) | YceI family protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2169|M.gilvum_PYR-GCK ----MTTATTALPTGTWTIDPVHSAVNFSVRHLM-VSKVRGGFDTFSGAV
Mvan_4531|M.vanbaalenii_PYR-1 ----MTTVTSALSVGTWAIDPVHSSVGFSVRHLM-VSKVRGVFDTFSGAI
TH_1829|M.thermoresistible__bu ---MTTAAETRLSAGTWNIDPVHSTVGFSVRHLM-VSKVRGTFDRFNGAI
MSMEG_5125|M.smegmatis_MC2_155 ---MTVAVATDLTTGTWAIDPLHSSISFSVRHLV-VSKVRGTFEKFSGEI
MAB_4525|M.abscessus_ATCC_1997 ----MITTNPVLAAGTWTIDPVHSDITFSVRHLG-VSKVRGSFTDFSGEI
MMAR_1487|M.marinum_M MTTLEALLSDPDAQGPWHLVADRSTITFKIKNMWGLLTVKGEFTNFGGYG
MUL_2452|M.ulcerans_Agy99 MTTLEALLSDPDAQGPWHLVADRSTTTFKIKNMWGLLTVKGEFTNFGGYG
MAV_4031|M.avium_104 ---METLLHDPEMAGVWNLVPDRSAITFSIKNMWGLLTVRGRFTDFTGDG
* * : . :* *.:::: : .*:* * * *
Mflv_2169|M.gilvum_PYR-GCK TVAEDGTPSVRAEIAVGSVDTRNEQRDAHLRSADFFDVENHPTATFVSTA
Mvan_4531|M.vanbaalenii_PYR-1 TVAEDGTPSVHAEIAVDSVNTRNEQRDGHLKSADFFDAEKHPVATFSSTA
TH_1829|M.thermoresistible__bu EVAEDGTASVRAEIDIDSINTRNEQRDAHLKSAEFFDVANHPTATFVSTG
MSMEG_5125|M.smegmatis_MC2_155 TVAEDGTPSVSAEIAVDSIHTGNEQRDEHLKSADYFDVEKFPVATFVSTG
MAB_4525|M.abscessus_ATCC_1997 TVAEDGTPSVSATIDVASVDTRNDQRDTHLRSADFFDTDNHPKATYRSTA
MMAR_1487|M.marinum_M ELADHGAVSGHLEIETASVRTGIGSRDKHLRSADFFDVERFPQIRVVVTG
MUL_2452|M.ulcerans_Agy99 ELADHGAVSGHLEIKTASVRTGIGSRDKHLRSADFFDVERFPQIRVVVTG
MAV_4031|M.avium_104 QLTGKGAVFGRVDIRAASLDTGIGRRDQHLRSPDFFDVERFEKISVVVTG
:: .*: * *: * ** **:*.::**. .. *.
Mflv_2169|M.gilvum_PYR-GCK VRPD-GDDYILDGDFTLKGVTRPISLALQFNGVNPGMGHGEVAGFEASVV
Mvan_4531|M.vanbaalenii_PYR-1 VRQD-GDGYVVDGDFTLKGVTRPISLNLDFNGVNPGMGHGEVAGFEASVV
TH_1829|M.thermoresistible__bu LRRD-GEDYLLDGDLTIKGITRPVTLEMQFNGVNPGMGQGEVAGFEASVV
MSMEG_5125|M.smegmatis_MC2_155 VTQK-GDGYVVDGDFTLKGITKPVSLNLVFDGVNPGMGHGAVAGFEASVV
MAB_4525|M.abscessus_ATCC_1997 VRPE-GDDYLVEGELTLHGVTRPVALSLSLEGVGAGVQGGSVAGFEASAE
MMAR_1487|M.marinum_M LQPTKGRGADLRANFTIKGVGDPVPLPVTITEFGDGS-----VRICGEAE
MUL_2452|M.ulcerans_Agy99 LQPTNGRGADLRANFTIKGVGDPVPLPVTITEFGDGS-----VRICGEAE
MAV_4031|M.avium_104 LQPTKGKNADLRTDFTVKGVSAQLPLPVTILELDDGS-----IRITGETT
: * . : ::*::*: :.* : : .. * : ...
Mflv_2169|M.gilvum_PYR-GCK VNRKDFGIDIDMPLETGGAVVGDKVTITLEIEATRQA----
Mvan_4531|M.vanbaalenii_PYR-1 LNRKDFGIDIDMPLETGGAVVGDKVTITLEIEALRQA----
TH_1829|M.thermoresistible__bu LNRRDFGIDIDTPLETGGVVVGDKVTVTLEIEAVKQQDA--
MSMEG_5125|M.smegmatis_MC2_155 LNRKEFGIDIDMPLETGGAVVGENITITLNIEALKQA----
MAB_4525|M.abscessus_ATCC_1997 INRSDFGITG------GAGLVGEKVTLTFNIEAGHPEAPSN
MMAR_1487|M.marinum_M IDRAQFGLDWN-----KFGVMARTATVSAVLVFAPARVV--
MUL_2452|M.ulcerans_Agy99 IDRAQFGLDWN-----KFGVMARTATVSAVLVFAPARVV--
MAV_4031|M.avium_104 LDRARFDLGWN-----RFGMIGRTATAAADVIFVRDSQ---
::* *.: ::. . * : :