For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGAVAAGACVVVWIGDPTTPGGMLPECPTKALAGINCPGCGTLRMIYSLLHGDVLAAARFNAVALVGLAL LIAAFAIWTYGRAVDREIVSWQHHRWAGAVTLAVVGVWFVVRILPFEPFTQLRV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2011 | - | - | 100% (124) | hypothetical protein Mflv_2011 |
M. gilvum PYR-GCK | Mflv_3594 | - | 7e-16 | 41.53% (118) | hypothetical protein Mflv_3594 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1642 | - | 3e-11 | 37.17% (113) | hypothetical protein Mb1642 |
M. tuberculosis H37Rv | Rv1616 | - | 3e-11 | 37.17% (113) | hypothetical protein Rv1616 |
M. leprae Br4923 | MLBr_01276 | - | 6e-11 | 33.90% (118) | hypothetical protein MLBr_01276 |
M. abscessus ATCC 19977 | MAB_3320c | - | 1e-33 | 55.12% (127) | hypothetical protein MAB_3320c |
M. marinum M | MMAR_0725 | - | 8e-43 | 61.29% (124) | hypothetical protein MMAR_0725 |
M. avium 104 | MAV_4739 | - | 2e-44 | 62.10% (124) | hypothetical protein MAV_4739 |
M. smegmatis MC2 155 | MSMEG_3224 | - | 3e-17 | 44.07% (118) | hypothetical protein MSMEG_3224 |
M. thermoresistible (build 8) | TH_1096 | - | 2e-14 | 42.98% (114) | CONSERVED MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_3586 | - | 2e-42 | 60.48% (124) | hypothetical protein MUL_3586 |
M. vanbaalenii PYR-1 | Mvan_4717 | - | 4e-56 | 75.81% (124) | hypothetical protein Mvan_4717 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2011|M.gilvum_PYR-GCK ---------------------------MGAVAAGACVVVWIGDPTTPGGM Mvan_4717|M.vanbaalenii_PYR-1 ---------MPARQP-APAR-LGGPLLVGALAAGACAVVWVADPTTPGGL MMAR_0725|M.marinum_M ---------MVTHQG-AVRLSLGAPLLVAASTTLVCAAIWVGDPTTPHGP MUL_3586|M.ulcerans_Agy99 ---------MVTHQG-AVRLSLGAPLLVAASTTLVCAAIWVGDPTTPHGP MAV_4739|M.avium_104 ---------MVIRRG-AVQQNLTAPVVVAASATVLCAAVWAGDPTTPGGP MAB_3320c|M.abscessus_ATCC_199 ---------MTTSRPSTVVSRLAAPAVVAGAAAAGCAAVWFGDPTTPGGV Mb1642|M.bovis_AF2122/97 MEA-----SGRQRR--------YAAAGSVVLLAGALGYIGLVDPHNSNSL Rv1616|M.tuberculosis_H37Rv MEA-----SGRQRR--------YAAAGSVVLLAGALGYIGLVDPHNSNSL MLBr_01276|M.leprae_Br4923 MELNQVSRAAQQRRQQDPHRRLYGVAGSGLLLAGAFGYIGFVDPHNADLV MSMEG_3224|M.smegmatis_MC2_155 MEPSERIDHLRTRR---------AALGAGALFAGALAYLGFADPHRPGFL TH_1096|M.thermoresistible__bu MTSDG-ATRSRPRRPGRRHGAVAVTATAVVAALAALTYVALMDPHRPGFL : ** . Mflv_2011|M.gilvum_PYR-GCK LPECPTKALAGINCPGCGTLRMIYSLLHGDVLAAARFNAVALVGLALLIA Mvan_4717|M.vanbaalenii_PYR-1 LPQCPTKALLGVDCPGCGALRMIYSLLHGDVLAAIRFNALAVVALGFLVV MMAR_0725|M.marinum_M LPVCPTKALLGIDCPGCGSLRMLYSLMHGDLLAAARFNALGLAATALLVW MUL_3586|M.ulcerans_Agy99 LPACPTKALLGIDCPGCGILRMLYSLMHGDLLAAARFNALGLAATTLLVW MAV_4739|M.avium_104 LPVCPTKALLGVDCPGCGSLRMVYALMHGNLLGAARFNALGLAAVVLLMW MAB_3320c|M.abscessus_ATCC_199 LPVCPLKALTGLDCPGCGGLRMAYSLMHGDVLGALRYNAVGLVAAGFLAA Mb1642|M.bovis_AF2122/97 YPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVPVLAS Rv1616|M.tuberculosis_H37Rv YPPCLFKLLTGWNCPACGGLRMIHDLLHGELAASINDNVFLLVGVPVLAS MLBr_01276|M.leprae_Br4923 YPLCLFKLLTGWNCPFCGGLRLMHDLLHGDLAASVSDNVFLLVGIPVLVG MSMEG_3224|M.smegmatis_MC2_155 FPPCPFKMLTGWDCPGCGGLRMTHDLLHGDVAAAVVDNVFALVALPVLLA TH_1096|M.thermoresistible__bu FPACPFHQVTGWFCPGCGGLRMTHHLLHGELTAAAVDNVFLLVGLPVLAL * * : : * ** ** **: : *:**:: .: *.. :.. .* Mflv_2011|M.gilvum_PYR-GCK AFAIWTYGRAVDRE--IVSWQHHRWAGAVTLAVVGVWFVVRILPFEPFTQ Mvan_4717|M.vanbaalenii_PYR-1 AFAAWTYGRIVDRR--MVSWQHHKWAAPVTLAVVVVWFVLRIMPFAPFTA MMAR_0725|M.marinum_M AYLVWTYGRLVGRR--IGGWQRSRWAAPVTLSLVLVWFVVRNIPVAPFNA MUL_3586|M.ulcerans_Agy99 AYLVWTYGRLVGRR--IGGWQRSRWAAPVTLSLVLVWFVVRNIPVAPFNA MAV_4739|M.avium_104 AYFAWTYGHLVGRR--IRSWQHHRWAAAVTLSLVLAWFVVRNIPVAPFTA MAB_3320c|M.abscessus_ATCC_199 CFVAWTASRWRGESGWNPPWLRGR-TPAIIAVVFVAWFVIRLIPVAPFTA Mb1642|M.bovis_AF2122/97 WVLLRRR---------HGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVP Rv1616|M.tuberculosis_H37Rv WVLLRRR---------HGDLALPIPVMIAVAVAVIAWTVLRNLPGFPLVP MLBr_01276|M.leprae_Br4923 WVVLRRR---------LGQSVLPTVALLTITVASIVWTVLRNVPGFPLVP MSMEG_3224|M.smegmatis_MC2_155 WAIVRRR---------SGKPVFTVAVVAVILVSAAVWTVTRNLPGFPLVP TH_1096|M.thermoresistible__bu WLLIRAR---------LRLRLMPPAAVAVLLAAALIWTVVRNLPGFPLIP . * * * :* *: Mflv_2011|M.gilvum_PYR-GCK LRV-- Mvan_4717|M.vanbaalenii_PYR-1 LRV-- MMAR_0725|M.marinum_M LFV-- MUL_3586|M.ulcerans_Agy99 LFV-- MAV_4739|M.avium_104 LHV-- MAB_3320c|M.abscessus_ATCC_199 LRV-- Mb1642|M.bovis_AF2122/97 TISG- Rv1616|M.tuberculosis_H37Rv TISG- MLBr_01276|M.leprae_Br4923 TVYSG MSMEG_3224|M.smegmatis_MC2_155 TMLPS TH_1096|M.thermoresistible__bu TVLSG