For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LAAALAAFALTSCQAKEEAPASEDGGSAAPAEITVEASDTSCTLSGTEGKTGANTFVITNNGNKVTEFYV YGEGERVMGEVENISPGLERRLIVQLSQPGTYQTACKPGMIGDGIRGDFTVTGDEVAVDTEGKFKEAADS YKRYVNSQVEALVPAVEAFVAAIKSGDIEGAKAQYPTSRTYFERIEPVAESFPNDLDPRIDLREADLEPG QKWTGYHRLEKDLWVTGPQPDTNAIADQLVADVKELQAGVSAPDFSVDSTQIAGGAQGLLDEIATSKISG EEDIFSHTDLWDFSANLQGSQTAVASVRPILDERNPDLGTRVDQRFEEVEALLQRYREGDGFVTYDKVTE PERQELSRAIDALSKEVSQVQGVIAPQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1951 | - | - | 100% (378) | hypothetical protein Mflv_1951 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1162c | - | 1e-148 | 68.90% (373) | hypothetical protein MAB_1162c |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_2484 | - | 2e-45 | 32.56% (387) | hypothetical protein MAV_2484 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_3276 | - | 4e-35 | 34.67% (274) | PUTATIVE protein of unknown function DUF451 |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4774 | - | 0.0 | 92.61% (379) | hypothetical protein Mvan_4774 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1951|M.gilvum_PYR-GCK --------MLAAALAAFA---LTSCQAKEEAPAS-EDGGSAAPAEITVEA Mvan_4774|M.vanbaalenii_PYR-1 MKVHPSVAVLAAATAAFA---LAGCQAKEEAPAASEEGGSTAPAQVTVEA MAB_1162c|M.abscessus_ATCC_199 --MKPSLAYVGAALAVAAGTTLAGCTPKEPAQGGAAGGG----QEITVTA TH_3276|M.thermoresistible__bu MRRFVAWTVPVAALALIA----AGCASGDSADRAESTG------------ MAV_2484|M.avium_104 ----------MLSVTACG----HSGDNANHAAQSKPGGGNAVKITLTNSA : : . . : * . * Mflv_1951|M.gilvum_PYR-GCK SDTSCTLSGTEGKTGANTFVITNNGNKVTEFYVYGEGERVMGEVENISPG Mvan_4774|M.vanbaalenii_PYR-1 SDDACELSGTEGKTGANTFVITNNGTKVTEFYVYGEGERVMGEVENISPG MAB_1162c|M.abscessus_ATCC_199 TDSSCQLSKTEGTTGPVTFNVTNNGSKVTEFYVYDKGDRALGEVENIGSG TH_3276|M.thermoresistible__bu -------------------------------------------------- MAV_2484|M.avium_104 GKDGCALDTTNVPAGPVTFTVANTNAPGISEVELLRDQRIVGEKENLAPG Mflv_1951|M.gilvum_PYR-GCK LERRLIVQLSQPGTYQTACKPGMIGDGIRGDFTVTGDEVAVDTEGKFKEA Mvan_4774|M.vanbaalenii_PYR-1 LQRKLIVQLTQPGTYQTACKPGMVGDGIRSDFTVTGDAVQVDTEGKFKEA MAB_1162c|M.abscessus_ATCC_199 ISRKLIVQFTEPGTYQTACKPGMIGDGIRGDLTITGAAVKLDAEGKFKDA TH_3276|M.thermoresistible__bu ----------------------------TGTVTETTEAAAGADNPLIVEA MAV_2484|M.avium_104 LDPVSFTLTLDGGSYQLYCPGASTEYQTLTVTGKAPATPTGTVATVLSQG : : :. Mflv_1951|M.gilvum_PYR-GCK ADSYKRYVNSQVEALVPAVEAFVAAIKSGDIEGAKAQYPTSRTYFERIEP Mvan_4774|M.vanbaalenii_PYR-1 ADSYKRYVNSQVEALVPAVEAFVAAIKSGDIEAAKAQYPTSRVYYERIEP MAB_1162c|M.abscessus_ATCC_199 TDRYRGYVISQVDALSEAAAKFVAAVKAKDIASAKAQYPTSRVYYERIEP TH_3276|M.thermoresistible__bu VDQYHAYAVEQTEELVRVTRTFTDAVRAGDLPAAQAAYAPSRQPWERIEP MAV_2484|M.avium_104 TKDYAAYIVNQIGQLNDGVKALDAAVQAGNLDAAKAAYAKARLYWERSES .. * * .* * . : *::: :: .*:* *. :* :** *. Mflv_1951|M.gilvum_PYR-GCK ----------VAESFPNDLDPRIDLREADLE--PGQKWTGYHRLEKDLWV Mvan_4774|M.vanbaalenii_PYR-1 ----------VAESFPDDLDPRIDLREADLE--PGQKWTGFHRLEKDLWV MAB_1162c|M.abscessus_ATCC_199 ----------VAEAFPNDLDPRIDLREADLQ--PGEKWTGYHRLEKDLWV TH_3276|M.thermoresistible__bu ----------LAA-LVEQIDVLIDARVDDFAGIDDPAFSGWHRLEHLLFE MAV_2484|M.avium_104 TVEGFVLPGFAVGDNAGSLDYLIDMRESTPVD-GKVGWKGFHAIERDLWQ . .:* ** * :.*:* :*: *: Mflv_1951|M.gilvum_PYR-GCK TGPQ-PDTNAIADQLVADVKELQAGVSAPDFSVDSTQIAGGAQGLLDEIA Mvan_4774|M.vanbaalenii_PYR-1 TGPQ-ADTNAIADQLVADVKELQAGVSAPDFSVDSTQIAGGAQGLLDEIA MAB_1162c|M.abscessus_ATCC_199 TGLQ-PDTNAIADQLLKDIKELSDGVRAKDFDINTTKIAGGAQTLLDEVA TH_3276|M.thermoresistible__bu QNTT-EGGVPFADQLDRDVARLRDEMAS--LEIAPVDVPVGAAELIEEVS MAV_2484|M.avium_104 AGAITPGTKALSTELVGNVGKLHGIVAT--LQYKPEDLANGASDLIEEIQ . . .:: :* :: .* : : :. . .:. ** *::*: Mflv_1951|M.gilvum_PYR-GCK TSKISGEEDIFSHTDLWDFSANLQGSQTAVASVRPILDERNPDLGTRVDQ Mvan_4774|M.vanbaalenii_PYR-1 TSKISGEEDIFSHTDLWDFNANLQGSQTAVASVRPILDERNPDLGTRVDQ MAB_1162c|M.abscessus_ATCC_199 RTKISGEEETFSHTDLWDFQANLDGSQNAVATVRPILDERKPELGQAIDK TH_3276|M.thermoresistible__bu EGKVTGEENRYAKTDLWDFEANLQGSRVAIDTLSPALAEADPALLGRIND MAV_2484|M.avium_104 NTKITGEEEAFSHIDLVDFSGNVEGAQQAYASLRPGLEKIDNNLVHQIDQ *::***: ::: ** **..*::*:: * :: * * : . * ::. Mflv_1951|M.gilvum_PYR-GCK RFEEVEALLQRYREGDGFVTYDKVTEPERQ--------------ELSRAI Mvan_4774|M.vanbaalenii_PYR-1 RFEEVEALLERYREGDGFVSYDKVTEPERQ--------------ELSRAI MAB_1162c|M.abscessus_ATCC_199 RFKEVDALLGKYRKGDGFVFYDTVTQDQRI--------------ELAHAI TH_3276|M.thermoresistible__bu GFDEIFETMQPLRRGDGWVLYCTEDDPYPSPRCPEVTVPRQTVDTLKAQL MAV_2484|M.avium_104 QFQNVLATLDGYRDPGALGGYRTYTPALKASDAP----------KLTAVI *.:: : * .. * . * : Mflv_1951|M.gilvum_PYR-GCK DALSKEVSQVQGVIAPQ- Mvan_4774|M.vanbaalenii_PYR-1 DALSKEVSQVQGVIAPQ- MAB_1162c|M.abscessus_ATCC_199 DALSKEVSEVQGVIAGR- TH_3276|M.thermoresistible__bu AGLSEEVSQVAGVLDLK- MAV_2484|M.avium_104 QPLHQSLSTVAQKVVSAG * :.:* * :