For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VARACRGCGVELLKRHQKVFCGNACQQTYQRRLLLGAWLETGVCRGGMSHQRHYVRVYLNEQQGGCCAIC GLKNLWNGLTLGLVIDHIDGDPKNDRRENLRLICPNCDSQLPTYKAKNWGKGRDNRRQRYADGQSY
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1579 | - | - | 100% (136) | HNH endonuclease |
M. gilvum PYR-GCK | Mflv_1578 | - | 5e-40 | 56.06% (132) | HNH endonuclease |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_5876 | - | 1e-37 | 61.61% (112) | H-N-H endonuclease F-TflIV |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_5177 | - | 2e-58 | 73.53% (136) | HNH endonuclease |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1579|M.gilvum_PYR-GCK MARACRGCGVELLKRHQKVFCGNACQQTYQRRLLLGAWLETGVCRGGMSH Mvan_5177|M.vanbaalenii_PYR-1 MSRTCLGCGVDLQTRQQKVFCSNACQQSYRRRLLLEAWLATGVC-GRLSY MSMEG_5876|M.smegmatis_MC2_155 -----------------------MCQGSARRQASTKRWLESGQA-SIGTL ** : :*: ** :* . . : Mflv_1579|M.gilvum_PYR-GCK QRHYVRVYLNEQQGGCCAICGLKNLWNGLTLGLVIDHIDGDPKNDRRENL Mvan_5177|M.vanbaalenii_PYR-1 QGHYIRDYVYEQQGGCCALCGIKNTWNGLTLALIIDHIDGDSGNNRRENL MSMEG_5876|M.smegmatis_MC2_155 PDHYIRQYLTTEQGGCCAICGGATTWQGLPLTLVLDHVDGDPTNNRRENL **:* *: :******:** . *:**.* *::**:***. *:***** Mflv_1579|M.gilvum_PYR-GCK RLICPNCDSQLPTYKAKNWGKGRDNRRQRYADGQSY Mvan_5177|M.vanbaalenii_PYR-1 RLICPNCDSQLPTYKARNRGKGRFYRRQRYRDGLSY MSMEG_5876|M.smegmatis_MC2_155 RLVCPNCDSQLPTYKSRNRGKGRHFRRQRYADGKSY **:************::* **** ***** ** **