For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPARRARLLFGVLAVVALGVTSCSFRTGPGPFERPFAASSPWRHEIPSDAQVDADSAAMIAAVQRQPALI ANLVAYGIPIYRADEDTPTHTVSCTRKDYGICPFAGWPVPIPNGAQPNTGSDGVLVSVRESDGTVFEFWR AARDGGAWTTEFAAVNSLRGSGWGGAATGSGASRLAGVIRVAEIAAGEIPHALALQSNNACPNFRPPALK SDGMSERDDCIPEGARLQLDPQLDLDSMDLSPGELAVGRAMQRYGGFLMDVADTPMSVSFERDRDAAPGE LGPTYSDAGFRWDYDAMENIPWDRLRVLK
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1499 | - | - | 100% (309) | hypothetical protein Mflv_1499 |
M. gilvum PYR-GCK | Mflv_1504 | - | 3e-38 | 34.47% (293) | hypothetical protein Mflv_1504 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_5247 | - | 1e-133 | 75.41% (305) | hypothetical protein Mvan_5247 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1499|M.gilvum_PYR-GCK ---------MPARRARLLFGVLAVVALGVTSCSFRTGPGPFERPFAASSP Mvan_5247|M.vanbaalenii_PYR-1 MAVTGRPDRIMVPRVCALVAALAVVVGGGTSCSSPSASGALASPFDASSP : . *. *...****. * **** :..*.: ** **** Mflv_1499|M.gilvum_PYR-GCK WRHEIPSDAQVDADSAAMIAAVQRQPALIANLVAYGIPIYRADEDTPTHT Mvan_5247|M.vanbaalenii_PYR-1 WRQVIPADAPVDPNSTAMIASVQPTPALNANLVAYGIPIYAAGRDTPTYA **: **:** **.:*:****:** *** *********** *..****:: Mflv_1499|M.gilvum_PYR-GCK VSCTRKDYGICPFAGWPVPIPNGAQPNTGSDGVLVSVRESDGTVFEFWRA Mvan_5247|M.vanbaalenii_PYR-1 VACTRVDYGLCPFAGWPVAIPDGAEPNTGSDGVLVSVQESSGIIFEFWRA *:*** ***:********.**:**:************:**.* :****** Mflv_1499|M.gilvum_PYR-GCK ARDGGAWTTEFAAVNSLRGSGWGGAATGSGASRLAGVIRVAEIAAGEIPH Mvan_5247|M.vanbaalenii_PYR-1 VRDGETWTTAFGAVNSLHGSGWGGAATGSGASRLAGVVRVAEIADGEIPH .*** :*** *.*****:*******************:****** ***** Mflv_1499|M.gilvum_PYR-GCK ALALQSNNACPNFRPPALKSDGMSERDDCIPEGARLQLDPQLDLDSMDLS Mvan_5247|M.vanbaalenii_PYR-1 ALALQSNNACPTFRAPALKSDGTSTRADCIPEGARLQLDPELDLGSLDLR ***********.**.******* * * *************:***.*:** Mflv_1499|M.gilvum_PYR-GCK PGELAVGRAMQRYGGFLMDVADTPMSVSFERDRDAAPGELGPTYSDAGFR Mvan_5247|M.vanbaalenii_PYR-1 PGELAVARAMQRYGGYLMDVANTPLSVSFEREADPAADEVGQTYSDAGFR ******.********:*****:**:******: *.*..*:* ******** Mflv_1499|M.gilvum_PYR-GCK WDYDAMENIPWDRLRVLK Mvan_5247|M.vanbaalenii_PYR-1 WDYDAMENVPWDKLRVLK ********:***:*****