For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SDRKNDVPNTVTSIPLVDPHAPKPDPSIGDLVKDATAQVSTLVRAEVELAKAEITRDVKKGLTGSVFFIA ALVVLFYSTFFFFFFLAELLDNWLWKWAAYLIVFGIMVVLTALLALFGYLKVRRIRGPQKTIETVKELPD AFTPGPDKRAVAASKDNLPATQKDPSGW*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_1378 | - | - | 100% (169) | hypothetical protein Mflv_1378 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3693 | - | 8e-64 | 70.24% (168) | transmembrane protein |
| M. tuberculosis H37Rv | Rv3669 | - | 8e-64 | 70.24% (168) | transmembrane protein |
| M. leprae Br4923 | MLBr_02296 | - | 5e-65 | 70.06% (177) | hypothetical protein MLBr_02296 |
| M. abscessus ATCC 19977 | MAB_0423c | - | 7e-50 | 61.82% (165) | hypothetical protein MAB_0423c |
| M. marinum M | MMAR_5157 | - | 5e-65 | 71.76% (170) | hypothetical protein MMAR_5157 |
| M. avium 104 | MAV_0460 | - | 2e-63 | 69.94% (173) | hypothetical protein MAV_0460 |
| M. smegmatis MC2 155 | MSMEG_6182 | - | 5e-73 | 79.29% (169) | hypothetical protein MSMEG_6182 |
| M. thermoresistible (build 8) | TH_0964 | - | 1e-70 | 78.40% (162) | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_4243 | - | 6e-65 | 71.76% (170) | hypothetical protein MUL_4243 |
| M. vanbaalenii PYR-1 | Mvan_5428 | - | 1e-83 | 89.35% (169) | hypothetical protein Mvan_5428 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1378|M.gilvum_PYR-GCK -------MSDRK------NDVPNTVTSIPLVDPHAPKP-DPSIGDLVKDA
Mvan_5428|M.vanbaalenii_PYR-1 MAGRKPGVSDRR------NGVPNTVTSIPLVDPHAPKP-DPSIGDLVKDA
MMAR_5157|M.marinum_M -----MSKPDRK------NGVPSTLTTIPLADPHAMPA-EPSIGDLIKDA
MUL_4243|M.ulcerans_Agy99 -----MSKPDRK------NGVPSTLTTIPLADPHAMPA-EPSIGDLIKDA
MAV_0460|M.avium_104 -----MSKVEGK------NGVPSTLTTIPLTDPHAKPA-EPTIGDLIKDA
Mb3693|M.bovis_AF2122/97 -----MSKIDRK------NGVPSTLTTIPLADPHAGPA-EPSIGDLIKDA
Rv3669|M.tuberculosis_H37Rv -----MSKIDRK------NGVPSTLTTIPLADPHAGPA-EPSIGDLIKDA
MLBr_02296|M.leprae_Br4923 -----MSKGDRK------NGVPSTLTTIPLVDPHAEPT-EPSIGDLIKDA
MSMEG_6182|M.smegmatis_MC2_155 -----MSIGDRR------NGVPATVTSIPLVDPHAPKP-DPSIGDLVKDA
TH_0964|M.thermoresistible__bu --------------------VPTTVTSIPLVDPHAPKP-DPSIGDLVKDA
MAB_0423c|M.abscessus_ATCC_199 -----MSSPGSRNYRTDSNGVPITVAAIPLSDPNATGTGEPTIGNLVRDA
** *:::*** **:* . :*:**:*::**
Mflv_1378|M.gilvum_PYR-GCK TAQVSTLVRAEVELAKAEITRDVKKGLTGSVFFIAALVVLFYSTFFFFFF
Mvan_5428|M.vanbaalenii_PYR-1 TAQVSTLVRAEVELAKAEITRDVKKGLTGSVFFIGALVVLFYSTFFFFFF
MMAR_5157|M.marinum_M TTQMSTLVRAEVELARAEITRDVKKGLTGSVFFIAALVVLFYSTFFLFFF
MUL_4243|M.ulcerans_Agy99 TTQMSTLVRAEVELARAEITRDVKKGLTGSVFFIAALVVLFYSTFFLFFF
MAV_0460|M.avium_104 TTQVSTLVRAEVELARAEITRDVKKGLTGSVFFIAALVVLFYSTFFFFFF
Mb3693|M.bovis_AF2122/97 TTQMSTLVRAEVELARAEITRDVKKGLTGSVFFISSLVVGFYSTFFFFFF
Rv3669|M.tuberculosis_H37Rv TTQMSTLVRAEVELARAEITRDVKKGLTGSVFFISSLVVGFYSTFFFFFF
MLBr_02296|M.leprae_Br4923 TTQVSTLVRAEVELARAEIIRDVKKGLTGSVFFIAALVVLFYSTFFFFLF
MSMEG_6182|M.smegmatis_MC2_155 TAQVSTLVRAEVELAKAEITRDVKKGLTGSVFFIAALVVLFYSTFFFFFF
TH_0964|M.thermoresistible__bu TAQVSTLVRAEVELAKAEITRDVKRGLTGSVFFIAALTVLFYSTFFLFFF
MAB_0423c|M.abscessus_ATCC_199 TTQVSALVRAEVELARAEVIRDVKKGVAGSIFFIAALVVLFYSTFFFFFF
*:*:*:*********:**: ****:*::**:***.:*.* ******:*:*
Mflv_1378|M.gilvum_PYR-GCK LAELLDNWLWKWAAYLIVFGIMVVLTALLALFGYLKVRRIRGPQKTIETV
Mvan_5428|M.vanbaalenii_PYR-1 LAELLDNWLWKWASYLIVFGIMVVLTGLLALFGYLKVRRIRGPQKTIETV
MMAR_5157|M.marinum_M LAELLDTWLWRWVAFLIVFGLMVLTTGMLALLGFLKVRRIRGPRQTIESV
MUL_4243|M.ulcerans_Agy99 LAELLDTWLWRWVAFLIVFGLMVLTTGMLALLGFLKVRRIRGPRQTIESV
MAV_0460|M.avium_104 VAELLDTWLWRWVAFLIVFGVQVVVGAVLALLGFLKVRRIRGPRQTIESV
Mb3693|M.bovis_AF2122/97 VAELLDTWIWRWVAFLLVFAIMVVVTAVLALLGFLKVRRIRGPRQTIASV
Rv3669|M.tuberculosis_H37Rv VAELLDTWIWRWVAFLLVFAIMVVVTAVLALLGFLKVRRIRGPRQTIASV
MLBr_02296|M.leprae_Br4923 LAELLDTWLWRWVALLIVFAIMVMVTAALALLGYVKIRRIRGPHQTIESV
MSMEG_6182|M.smegmatis_MC2_155 LAELLDTWLWRWVAFLIVFAIMLVVTGALALFGFLKVRRIRGPRQTIESV
TH_0964|M.thermoresistible__bu LAELLDTWLWRWAAFLIVFGIMVVVAAVLALFGYLKVRRIRGPKQTIESV
MAB_0423c|M.abscessus_ATCC_199 AAEVLKIWLPAWAAYLIIFAAMVFVAVLAVLIGYLQVRRIRGPQATIESV
**:*. *: *.: *::*. :. .*:*::::******: ** :*
Mflv_1378|M.gilvum_PYR-GCK KELPDAFTPGPDKRA----VAASK------DNLPATQ-----KDPSGW
Mvan_5428|M.vanbaalenii_PYR-1 REIPEAFTPGPDKRS----VATTN------GDQ-APP-----KDPSGW
MMAR_5157|M.marinum_M KETRTALIPGHDKST----AVEPS------ASAPGKP----VTDPSGW
MUL_4243|M.ulcerans_Agy99 KETRTALIPGHDKST----AVEPS------APAPGKP----VTDPSGW
MAV_0460|M.avium_104 KETRTALTPGHDKAAG-ARALTES------HGKHAKPGDGAAADPSGW
Mb3693|M.bovis_AF2122/97 KETRTALTPGHDKTPVTPKPVT---------SDRATP-----VDPSGW
Rv3669|M.tuberculosis_H37Rv KETRTALTPGHDKTPVTPKPVT---------SDRATP-----VDPSGW
MLBr_02296|M.leprae_Br4923 KETRTALTPGHDKAQARPRKLTGSGTNPENNPDRRTP-----ADPSGW
MSMEG_6182|M.smegmatis_MC2_155 KETREALTPGHDKTP---AQVD----------ADAKP----ASDPSGW
TH_0964|M.thermoresistible__bu RETREALTPGHDRAG----APTAP------EATAGKP-----SDPSGW
MAB_0423c|M.abscessus_ATCC_199 KETANVFSREDEAPS---------------DTKAIKP-----VDPSGW
:* .: : *****